Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    <---------At4g35610                                --------->ZAT18                               =========================HOX2a_HOX2a                               ------>ZmHOX2a(2)                              ==========================HOX2a_HOX2a                              <------ZmHOX2a(2)                             --------->ARR11(3)                 --------->HSFC1(2)                 <---------HSFB2a(1)                                            --------->ZAT14                 <---------HSFC1(2)<----------CDC5                              <---------At4g35610                 --------->HSFB2a(1)                                      <-----------HVH21  --------               <XXXXXXXXXXXXXXXXXXXXMIR2938                         <---------ARR14(2)    ===========   ===================================HOX2a_HOX2a         ----------->RAV1(1)   <---------ZAT14   ==================================HOX2a_HOX2a <------ZmHOX2a(1)  --------->GLK1(2)     ------>ZmHOX2a(2)   <------ZmHOX2a(1)     --------->LBD16    <-----------GT1         --------->ARR14(2)   <------ZmHOX2a(2)   tgagaggaatgaaattagaaccttctccagagatcgcgctgagatttaacaggaattgagcgccagagagtatccatgttagagcagagagatcggacct  15499500                                     <---------ARR14(2)                                     --------->ARR14(2)                              ------>ZmHOX2a(2)                            <---------AGP1                    =================HOX2a_HOX2a                    --------->ATERF1(1)                    <------ZmHOX2a(1)--------->GLK1(2)               --------->ANAC46 --------->LBD16                                             <--------              <---------LBD16 <---------LBD16                                      <---------ANAC58    --------->ARR11(3)      <---------ARR14(2)                                     <---------ANAC58    <---------ARR11(3)    ----------->ARR10              ------->TEIL          <-----------HVH21 ->SPL7    <-----------HVH21--------->ARR14(2)    --------->ATHB12            <---------ANAC58    --- ==========================HOX2a_HOX2a           <---------YAB1               <---------ANAC58    ---   cagtaatatctcgtttcacggaggaggctagatcgggagaatccatagaagatgattcgaacctctctaacctctcgattccgtcgcgagccttgagtag  15499600                                          ------>ZmHOX2a(1)                                       ------>NtERF2                                      <---------ALFIN1                                      --------->DEAR3(1)                                    <---------ATERF1(1)                                    ------>NtERF2                                  ===============HOX2a_HOX2a                                  ------>ZmHOX2a(2)                                  --------->ATERF1(1)     ------>NtERF2                     <--------                                 <------ZmHOX2a(2)       --------->ANAC58                  <---------DOF5.7(2)                                 ================HOX2a_HOX2a      ------->TEIL  <------ZmHOX2a(1) <--  ------>ZmHOX2a(1)              <---------ATERF1(1)     --------->RAP2.6(2)<------ZmHOX2a(2)     <--  <----------DOF2               <---------ARR14(2)       --------->ANAC58  <---------ARR14(2)    ---- -ANAC46--------->ZAT6          --------->ARR14(2)       --------->ANAC46 <---------At4g35610    <--- ------>GLK1(2)              <---------TOE2(3) --------->ANAC46  <---------CCA1(2)       --------->DOF5.7(2) ------>ARR14(2)   <-------TEIL<------ZmHOX2a(1)        --------->SPL7    --------->At4g35610    ----   aatccttttcgcactactatatacatccgataaggatccgcctccttcgacgataccagacgccattgtatctctcagatcaggacttctcgttaccgaa  15499700                                                               ---------->DOF2           --------->At4g35610                                                          =======================HOX2a_HOX2a              <---------ARR11(3)                          <----------ID1  ------>ZmHOX2a(2) -HSFB2a(2)  --------->CCA1(2)                            ======================HOX2a_HOX2a -------ANAC58--------->ARR11(3)                          <------ZmHOX2a(1)              ----------->RAV1(2) -------ANAC58--------->AHL20(1)                    --------->REM1(2)    <------ZmHOX2a(2) ----->HSFB2a(1)                      <-----------GT1 <---------ANAC46  <---------ARR14(2) ------HSFC1(2)               ----------->GT1      --------->ALFIN1     --------->ARR14(2) ----->HSFC1(2)             --------->ICU4       --------->ALFIN1---------->DOF2         <---------At4g35610   gcgtctctgaatcagatatattcgtatacaatgagtaatataacaaaacaagtgtggagaggaacaaaagagcggatcgaaattcaaaatcacctgagca  15499800                               <---------HSFB2a(2)                               ------>ZmHOX2a(1)                               --------->HSFB2a(2)                               --------->LBD16                              <---------LBD16                           <---------SPL7                           <-----------HVH21                           <---------RAP2.6(3)                           ------>NtERF2                           --------->ORA47(1)                          --------->DEAR3(1)                          --------->RRTF1(3)                          --------->RAP2.3(2)                          --------->RAP2.3(3)                         <------NtERF2                         --------->ATERF1(1)                         --------->ORA47(2)                         --------->RAP2.3(1)                         --------->DEAR4(2)                        <---------RRTF1(1)                        ------>NtERF2                       <---------DEAR3(1)                       <---------ANAC46                      --------->ATERF1(1)                      --------->RAP2.3(1)                                                  <---------AHL20(2)                    <-----------RAV1(1)       <------ZmHOX2a(1)                           --------->AHL20(2)                  --------->ALFIN1        --------->LBD16                          <------ZmHOX2a(2)         <---------TGA1a<---------RAP2.3(1)<------NtERF2                           ==================         --------->TGA1a<---------ATERF1(1)<-----------RAV1(2)                ---------->DOF2    --------->At4g35610<---------PCF2  --------->At4g35610      <---------ARR11(3)--------->ARR11(3)    <---------At4g35610--------->DEAR3(1)--------->DEAR3(1)     --------->ARR11(3)<---------ARR11(3)   agagagagcagacgagagacttgtggcgccgtcctggaattagccgcaggataaatcgcaatcggagatgttacgacgagaaaagatcgagatttaatcg  15499900                 --------->DAG2                ---------->DOF2            --------->ANAC58            --------->ANAC58               <---------CCA1(2)                                     <--- *TSS <------ZmHOX2a(1)             --------->MYB59                <---------TOE1(3)<---------ALFIN1 ============HOX2a_HOX2a          <---------MYB52(1)            ----------->HVH21 ----------->RAV1(1)   gagttagaggaaacaagaaaaagcgctaaatgcttcgttaggcccatatcgaaatgttttatgggcctgaaggttaagttgggccaacacaggcttacaa  15500000                                                                               --------->AtMYB61            <---------ICU4                                                  <---------ALFIN1        <   ------>ZmHOX2a(2)                                             <---------ANAC46                   < <---------ARR11(3)                                        --------->ICU4   --------->ANAC46    <---- --------->ARR11(3)                 <---------ANAC46  <---------ANAC46 --------->ARR14(2)      <----- ---------CBF          <---------ATHB12        <---------AHL20(2)<---------bZIP60(2)     <-----------GT1   attgatctctatacttatttctctaatcaacgagagttttgtgaagcattttttttgtgtgaagatgatgtggaatccacacctccactattttctcctt  15500100                                                                                      <------MYB83 <-                             ---------->ID1                                         <--------P    ---                          <---------DAG2                                          <---------HSFC1(2)                          <----------DOF2                                         <------MYB46(1) <--                        ------>MYB46(1)                                           <---------HSFB2a(1)                        ------>MYB83                                              --------->HSFB2a(1)                      ------->GAMYB                                               --------->HSFC1(2)      <----------DOF2--------->MYB46(3)                                           <------MYB83 ------ ----------DOF2    <<<<<<<<<GT-1                                       <---------TOE1(3)   <---------ARR14(2) ---------DAG2     <-----------GT1                                     <---------TOE2(3)   --------->GLK1(2) -----MYB52(1)<---------AHL20(1)                     <-----------GT1  <-----------GT1 <------MYB46(1) -----DOF2    --------->AHL20(1)          ---------->DOF2    ---------->ID1  <---------ZAT6--------->ARR14(2)   tactttttctttgaaaaatattaaccaacttttcgttttagtctaaaagactatgttacatttttcgcatattaacgtagtggaaggttggagaatccta  15500200            ------>MYB83            ------>MYB46(1)         ----------------->AGL1      --------->ZAT18      <---------ZAT18     <---------ANAC58                                                                               -     <---------ANAC58                                                                       <--------    --------------->AtSPL8                              <---------ARR11(3)                 <---------RAP2.6(3)    <---------------AtSPL8                              --------->AHL20(1)               --------->RAP2.6(3) --------AHL20(2)                                       <---------AHL20(1)           <---------ICU4 < ------>AHL20(2)  --------->ZAT18                       --------->ARR11(3)       <---------ZAT18 ---- -------AHL20(2)  <----------ID1 <-----------GT1     --------->YAB1        <----------DOF2 --------->LBD16 >ZmHOX2a(1)-------->P --------->MYB52(1)<---------HSFB2a(2)   <---------YAB1    --------->ZAT18 <---   ttaatttgtgtaccaacaaggggacaaactgaaattcactattctacaagctcaagaatatttttctgatagagtagctttagtgcatcatgccggtatt  15500300                                       <---------ANAC58                                       <---------ANAC58                                       --------->ANAC55(2)                                       <---------ANAC55(2)                                     <-----------GT1                                 --------->AHL20(2)                                 <---------AHL20(2)                                --------->AHL20(2)                                <---------AHL20(2)                           <---------AHL20(2)      <---------ZAT6               <---------TOE2(3) -------->AHL20(1)      <---------AHL20(1)         ----------->GT1       <---------YAB1 -MYB52(1)              <---------ARR11(3)     <---------YAB1          <---------ICU4              <- ---------AHL20(1)      --------->AHL20(1)  <---------------AGL15     --------->ICU4             ---- ----->AHL20(2)         --------->ARR11(3)  --------------->AGL15     <---------YAB1   ---------->DOF2 ------AHL20(2)        --------->CCA1(2)    <---------YAB1 ----------->GT1--------->ATHB12    <------   aatatataaaacctatactattcagatatattttttaaattacgttcttattagtgtaatattgtaaatgtcattatcatttgacgaaaaaaaggaacac  15500400  Previous    Next  AGI:  At2g36900.1    Description:  MEMB11 (Golgi SNARE protein membrin 11); SNAP receptor. Identical to Membrin-11 (MEMB11) [Arabidopsis Thaliana] (GB:Q9SJL6); similar to MEMB12 (Golgi SNARE protein membrin 12), SNAP receptor [Arabidopsis thaliana] (TAIR:AT5G50440.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67483.1); contains InterPro domain Vesicle transport v-SNARE; (InterPro:IPR007705) Range:  from: 15498514    to: 15499901    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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