Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         --------->ATHB12                                                                                <---------ICU4                                                                            <---------AHL20(1)                                                                            --------->AHL20(2)                                                                            <---------AHL20(2)                                                      ---------->DOF2       --------->AHL20(1)      ---------->ID1                            --------->AHL20(2)  <---------ARR11(3)<---------YAB1 --------GT1                               <---------ARR11(3)       --------->ARR11(3)--------->ICU4 ->TOE2(3)                           ---------->ID1  --------->AHL20(2) --------->AHL20(2) ->TOE1(3)                  --------->ANAC46 --------->TOE2(3)  ---------->DOF2--------->ICU4     <<<   aaccatttgtccaatttgttttcttctcacaaaccatttgtccaatttcttaaaataaaagagcattaaagaacttaattaattagtacttattgaattc  15492500                     <----------DOF2                 ---------->ID1                           --------->ZAT2               --------->MYB52(2)                         <---------ZAT2               <---------MYB46(3)                         --------->At4g35610           <------MYB46(1)                                <---------At4g35610   <-----------------AG        <----------DOF2          <-----------RAV1(2) <<<<<<TBF1<------MYB83 <---------YAB1      <-----------GT1                              --------->ANAC46   ttcttcacaaatttggtttgttccttttgatttctttctccactattcacaacttagaccagctgttcttgttttgcattggtgaccaaaaacacaacta  15492600                                                                  <---------ICU4                                                                  -------->HAHB4                                                              <---------AHL20(2)                                                              <---------YAB1                                                             <---------AHL20(1)                                                         <---------AHL20(2)                                                   --------->AHL20(2)                                                   <---------AHL20(2)                                                 <---------AHL20(2)                                                 --------->AHL20(2)                                               <---------AHL20(2) --------->YAB1                                               --------->AHL20(2)--------->ICU4                                             <---------AHL20(2) <---------AHL20(2)                                             --------->AHL20(2)--------->YAB1                                         --------->CCA1(2)   --------->AHL20(2)                                        <---------ARR11(3)   --------->AHL20(1)                                        --------->ARR11(3)   <---------AHL20(2)   <-------MYC3    ---       --------->ZAT18         --------------->AGL15    --------->AHL20(2)        ------->MYC3   ----  --------->AHL20(2)           <---------------AGL15 <---------AHL20(2)<---------TOE2(3)    <------ZmHOX2a(1)  <---------AHL20(2)          ----------------->AGL3 --------->AHL20(2)<---------TOE1(3)   ----------   aaatttatatgcactgtttctctctctccctctctacatatagatatatatatatatatataatataataatgaaggtaatccacatggggagaggagaa  15492700                                                                                          <---------ICU4                                                                   <---------AHL20(2)    <---------YAB1                                                                  ----------->TBP        --------->ICU4    --------->MYB52(1)                                            --------->ICU4       --------->YAB1 --------->YAB1                        <---------ANAC58           <---------ATHB12<---------YAB1 ------>DAG2                           <---------ANAC58       ------------>CBF   <---------ARR11(3) ------>DOF2      ----------->GT1  <---------WOX13(1)      ---------->DOF2    <----------DOF2<------- ->GT1     ----------->GT1      <---------YAB1  <---------ARR14(2)--------->AHL20(2)<----------DOF2   aaagcataatggaaggaaaatagaaaataggtttctcattgacttgagcgtttccaatacatagagcaataaatagatgtctttatctttgataattaca  15492800                                                              ------->GAMYB                                                             --------->MYB46(3)                                                          *TSS--------->AtMYB61                                                      --------->ARR11(3)                                                      <---------ARR11(3)                                                     --------->GLK1(1)                                                     <---------GLK1(1)                                                     <---------CCA1(1)                                                     --------->RVE1(1)                                                     --------->CCA1(1)                                                     <---------RVE1(1)                 <----------DOF2                    <---------ARR11(3)     --------->ZAT14                                --------->ARR11(3) ----GT1   <----------DOF2      <----------DOF2 ---------->DOF2                                ------   gaaccagagaactctttttcttttcccttcttctctttcaaaaaacaaaacaaagatatctcaaccaaaacacttagaccaagagagacagatagagaga  15492900                                                                    --------->TOE1(3)                                                                ---------->DOF2               <------                                                             --------->ANAC58                 -------   <------MYB46(1)   --------->ANAC58                        --------->ANAC46      <---------HSFB2a(2)   <------MYB83      --------->ANAC58               ------>ZmHOX2a(1)     <---------ICU4   --------->ANAC58 <--------P     ----------->HVH21                 ----------->RAV1(2)    --------->ICU4    --------->ANAC46 --------->ALFIN1  <---------bZIP60(2)            --------->At4g35610  ---------->DOF2     --------->ANAC58 --->CCA1(2)  ----------->GT1            <-------TEIL        --------->ANAC58      --------->HSFB2a(2)   tgggtagggctccatgttgtgacaaggcaaatgtgaagagaggtccatggtctcctgaagaagacgcaaagcttaaagattacatcgagaaacaaggaac  15493000                                                 --------->ATHB12          <----------DOF2                                                --------->ICU4      <---------ANAC58                                          <---------ARR11(3)        <---------ANAC58           <---------WOX13(1)   <---------MYB52(1)                  <---------ANAC46  <------NtERF2                ----------->GT1  <---------YAB1    <---------AHL20(2) ---ARR14(2)                <---------ZAT2--------->ARR11(3)      --------->ARR11(3) <---------ZAT6 -->ARR14(2)             ---------->DOF2 <---------CCA1(2) ----------->GT1 <---------DAG2   <--------   tggtggcaattggattgctctccctcacaaagctggtattttcatatctcatgattcgaatgggttaatttcttggacttttttttagtgttttctttgg  15493100                                                                                           --------->ATHB51                   --------->YAB1                                                          --------->AHL20(2)               <---------AHL20(2)                                                          --------->ATHB12              --------->AHL20(2)                            --------->ALFIN1               <---------AHL20(2)    <--------P<---------AHL20(2)                          --------->ALFIN1                <---------AHL20(2)    <---------WOX13(1)                                    <---------O2                    --------->AHL20(2)   <-------GAMYB--------->YAB1  --------->GLK1(2)   <---------TOE1(3)                     <---------AHL20(1)  <---------MYB46(3)     <----------DOF2            <---------TOE2(3)               <-------GAMYB <---------AtMYB61 <---------ICU4     <---------ANAC46<------ZmHOX2a(1)            ----------->GT1 --DOF2   <---------AHL20(2)--------->YAB1   <---------TOE2(3)   ----------->ARR10 <---------MYB46(3)   gttttggttgattttttttaataatctcttttataatctgatgtataaaggtttaaggagatgtgggaagagttgcagactgagatggttaaattatttg  15493200      --------->TOE1(2)      --------->TOE2(2)     --------->YAB1                                              --------->ATHB12<---------TOE2(3)   ------>MYB83                                                ------>NtERF2----------->GT1   ------>MYB46(1)                                           ----------------->AGL1 --------->AtMYB61             >>>>>>>>>TBF1                 <-----------------AGL1---------->DOF2 <---------MYB59           --------->ZAT14               <----------DOF2  <-----------RAV1(2)   agaccaaacataagacatggagatttcactgaagaagaagacaatattatctacagcctctttgcctccattggaagcaggttaagaaagtcttagtata  15493300                                       --------->CCA1(2)                             ------>ZmHOX2a(2)                        ------>ZmHOX2a(2)                       --------->CCA1(2)                      <---------ARR11(3)                      <---------ARR14(2)                      --------->AGP1  --------->ARR11(1)                                        -----                      <---------AGP1  --------->ARR11(3)                                      -------                      --------->ARR14(2)                                                   <---------GLK1(1)                      --------->ARR11(3)                               ---------->DOF2   <------MYB46(1)                   <---------WOX13(1) <---------ARR11(3)         --------->YAB1          <------MYB83                <---------YAB1    ---------->DOF2           <---------AHL20(2)         --------->ALFIN1              --------->YAB1--------->GLK1(1)       <---------YAB1   <---------YAB1 --------->DAG2        <-----------GT1<------ZmHOX2a(2)      --------->ICU4--------->AHL20(2)     ---------->DOF2   catagtcatttttcaatattgatagatctgatctcttaaagatatgaaaagattactcttgtttaaatcatatgaaagaaatgaagaaagtgggtatcag  15493400  Previous    Next  AGI:  At2g36890.1    Description:  ATMYB38/MYB38/RAX2 (myb domain protein 38); DNA binding / transcription factor. Identical to Protein REGULATOR OF AXILLARY MERISTEMS 2 (RAX2) [Arabidopsis Thaliana] (GB:Q9SJL7;GB:A5YZ54;GB:A5YZ55;GB:A5YZ66;GB:Q6R0A1;GB:Q9ZTE4); similar to ATMYB37/MYB37/RAX1 (myb domain protein 37), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G23000.1); similar to MYB24 [Malus x domestica] (GB:AAZ20440.1); contains InterPro domain Myb transcription factor (InterPro:IPR015495); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Hom Range:  from: 15492858    to: 15494356    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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