Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               ------>ZmHOX2a(2)                            --------->CCA1(2)                           <---------ARR14(2)                           <---------AGP1              --------->GLK1(2)            <---------HSFC1(2)            <---------HSFB2a(1)            --------->HSFB2a(1)            --------->HSFC1(2)      --------->ANAC58     --------->ARR11(3)      --------->ANAC58     <---------ARR11(3)                        ----------->RAV1(1) <---------ZAT14           --------->ARR14(2)                       <----------ID1 --------->ZAT14           --------->AGP1                         --------->ANAC58 ------->ANAC46            <-----------ARR10                      --------->ANAC58 ----->ZAT6----------->ARR10<------ZmHOX2a(2)    <------ZmHOX2a(2)--------->ANAC46     --------->AHL20(2)   cactacacaagcgaagattccagtttcaagatctaattccatcaatttccgatcgaatttgaaaaattaagcaacaaatttcaaaaaaaaaaaatgtata  15488100                       --------->ZAT14                       --------->At4g35610                       <---------ZAT14             <---------ALFIN1           ----------->RAV1(1)          --------->DEAR4(1)          <---------ETT(1)          --------->ANAC46          --------->DREB2C(2)                          --------->GLK1(2)                       ------          --------->DEAR3(1)                           <-----------ARR10                       <-----          --------->At1g77200                         <---------GLK1(2)           --------->CCA1(2)          ------->GAMYB<---------At4g35610   <---------------AGL15               <---------ARR14(2)          ----------->HVH21                  --------------->AGL15               --------->ARR14(2)         --------->MYB46(3)                 ----------------->AGL2            --------->YAB1  <------         --------->DEAR3(2)               <-----------GT1         <------ZmHOX2a(2)      --------->WOX13(1)   gtttcacttccaccgacacattttctgcagagtgattccaaaattttccagttacagaatctaattcgatcaatttctaatcagatttgagcaattaagc  15488200                                <---------ARR11(3)                                <---------ARR14(2)                                <---------AGP1                                --------->ARR14(2)                                              <----                                --------->ARR11(3)                                         <---------ARR14(2)                   <---------SPL7<------ZmHOX2a(2)                                         --------->AGP1           <------ZmHOX2a(1)    --------->AGP1                              --------->ANAC58 ------>ZmHOX2a(2)           =============================HOX2a_HOX2a                         --------->ANAC58<------ZmHOX2a(2)         <---------TOE2(3)     --------->At4g35610                       --------->AtMYB61 --------->ARR11(3)         <---------TOE1(3)     <---------CCA1(2)                       -------->P          <---------    <-----------ARR10      <-----------HVH21                        --------->At4g35610    <---------AGP1 --->At4g35610     <-----------HVH21            --------->ANAC46    <---------At4g35610    --------->ARR14(2) ----At4g35610  --------->MYB52(1)------>ZmHOX2a(2)             --------->TOE2(3)--------->ICU4------ ---TOE2(3)==============================HOX2a_HOX2a      --------->ATHB12---------->DOF2  <---------ARR11(3)   taaacaaatctaaggaaacaacgtccgagcgtcagatctagtttcaaatcgcgaaacgagtgattacattagctaccaaagcaaaaatgaacagatctaa  15488300                                                                                ----------->GT1                                                                               <------ZmHOX2a(1)                                                                          <---------HSFB2a(2)                                                                         =============HOX2a_HOX2a                                                                         ------>ZmHOX2a(2)                                                                        <------ZmHOX2a(2)                                                                        --------->CCA1(2)                                                                        ==============HOX2a_HOX2a                                                                       --------->ARR11(3)                                                                       <---------AGP1                            ------>MYB83                               --------->ARR14(3)                            ------>MYB46(1)                            --------->AGP1      ----------->TGA1    --------->AtMYB61                            <---------ARR14(3)      ----------->HVH21   <---------MYB59                              <---------ARR11(3) -----TOE2(3)    ------>ZmHOX2a(2)                                     --------->ARR14(2) --ARR10       --------->ARR14(2)                                      <---------ARR14(2) --->MYB52(1)  <---------ARR14(2)                                     <---------GLK1(1)  ---------->DOF2   cgaagagagtgacgatggatcggagaaaccaaacctgttgaaggaagtagagagggagagagattggaatcgagatctggaggagaaaaatgaaagcgat  15488400                                                  ----------->HVH21                                                 <-----------HVH21                                                <------NtERF2                                                <---------ANAC55(2)                                                <---------TGA1a                                                --------->TGA1a                                                --------->ANAC55(2)                                                <---------ANAC58                                                <---------ANAC58                                               ------>NtERF2                                              <---------ANAC46                                             <------NtERF2                                           <---------DEAR3(1)               <------NtERF2                                           ===============MYC_MYB         <---------ZAT18  *TSS                                           ---------->CDC5      <---------MYB52(1)    <---------ANAC58    ---------->DOF2--------->ATHB12 <------ZmHOX2a(1)       --------------------->WRI1<---------ANAC58   agagaagaaagagagagagatttattgagaacaagtgaggaaaactcggcgcgtgactcgctctctgtttgttttgcccgctcttctctcgtgcttcaca  15488500                                  <-------MYC2                                  ------->MYC2                                  ------->MYC3                                 --------->ANAC55(2)                                 <---------ANAC55(1)                                 <---------ANAC46                                 <---------TGA1a                                 ===============================================MYC_MYB                                 <---------ANAC58                                 <---------ANAC58                                 <---------ANAC55(2)                       --------->At4g35610                       <---------At4g35610                       --------->GLK1(1)                       --------->ZAT2                       <---------ZAT2                                               <---------TOE2(3)                     <------NtERF2<-------MYC3       --------->ZAT14           <----------DOF2                    --------->LBD16         <---------ARR11(3)                ------>ZmHOX2a(2)                   --------->ETT(1)         --------->ARR11(3)              <---------ARR11(3)                  <---------LBD16<---------O2        --------->ARR14(2)   --------->WRKY12             <-----------RAV1(1) --------->O2 ------>ZmHOX2a(2)          <---------MYB52(1)         <           <------------CBF      --------->TGA1a     <---------ARR14(2) <-------GAMYB        --------        <-----------TBP<---------GLK1(1)  <---------YAB1   <---------TOE1(2)--------->ARR11(3)     <-   tctcttcggtttatattgttgccggagctctgatcacgtgttttatgatctacagtattctcatgtttttagaccgttgatcttttaatgaagaatgaat  15488600                                                               <------MYB46(1)                                                               <------MYB83                                                              <---------DEAR3(1)                                                <------MYB83  <---------MYB46(3)                                               <---------TOE1(2)                                               <---------TOE2(2)                                             <-------GAMYB    --------->MYB111(1)                                        <---------MYB52(1)    <---------AtMYB61                                  -------->P<---------MYB46(3)--------->MYB111(2)                                  ------>MYB83<---------MYB52(1)                                  ------>MYB46(1)             --------->MYB55(2)                                 --------->MYB55(1)           --------->MYB46(2)                                --------->AtMYB61            <---------MYB55(1)                                <---------MYB111(2)          <--------P                                <---------ALFIN1<------MYB46(1)<---------MYB46(3)        <---------REM1(1)       <---------MYB46(2)          <-------GAMYB      --------->At4g35610       <---------MYB55(2)         <---------MYB46(3)                      <-  <-----------HVH21             <---------MYB111(1)        --------->MYB55(2)                    <---  --------->At5g28300           --------->MYB46(3)        --------->ALFIN1                       ---- ----------->GT1                --------->DEAR3(1)        <---------AtMYB61                    ------ ---------DEAR3(1)  <---------TOE2(3)  <-------GAMYB    --------->ALFIN1             --------->ANAC46 ->ATHB12  <---------ETT(2)    --------->MYB46(3)     <---------ANAC58               <---------ETT(1) --------ORA47(1)<---------MYB52(2) ------->GAMYB     <---------ANAC58      ----------->GT1    ------   ggacggtgagatgtagacaactaatgtaatctcaccaaccccgttgtcgttggtatgggtgtggttggtgagagagaagagtaatacccgacaatacccg  15488700                                                  ------>ZmHOX2a(1)                                   --------->ARR14(2)                                   <---------ARR14(2)                        ------>ZmHOX2a(2)       ------>ZmHOX2a(2)                        =================================HOX2a_HOX2a                       ==================================HOX2a_HOX2a                       <------ZmHOX2a(2)       <------ZmHOX2a(2)   <---------GLK1(2)  --------->AGP1          <---------ARR14(2)   <---------ARR14(2) <---------ARR11(3)      --------->ARR14(2)   --------->ARR14(2) --------->ARR11(3)      <---------ARR11(3) --------->LBD16      <---------ARR14(2)      <---------GLK1(2) --------LBD16        --------->ARR14(2)     <---------ARR14(1)        --------->ZAT2            <--- ------ARR14(2)       <---------AGP1        --------->LBD16            <---------ZAT2          <----- ----->ARR14(2)      <---------CCA1(2)  --------->ARR14(2)    <-------MYC3         <---------ATHB12 ----->HVH21        ----------->ARR10   <---------ARR14(2)    ------->MYC3 <------NtERF2      <------ --->ANAC46  ----------->GT1      <---------GLK1(1)     <---------GLK1(1) ------>NtERF2    <------ZmHOX2a(1)   acccggattttgacatcgtaattagatcttggttatatatccgaaccggatcctttggataccacatggaccatgctggcatcaaatcaaggaggagtgg  15488800                                                                                <------MYB46(1)                                                                               <---------AtMYB61                                                                               --------->MYB46(2)                                                                               --------->MYB111(1)                                                                               --------->MYB111(2)                                                                               <---------MYB46(3)                                                                               <---------DEAR3(1)                                                                              <--------P                                                                              <---------MYB55(1)                              <---------AHL20(2)                             <-------GAMYB                          --------->AHL20(2)                                 <---------ANAC58                          <---------AHL20(2)                                 <---------ANAC58                         --------->AHL20(1)                                 --------->ATHB12                         <---------AHL20(1)                                 --------->MYB52(2)                         <---------AHL20(2)                                 <---------MYB46(3)                         --------->AHL20(2)                                 --------->MYB55(2)                     <---------AHL20(1)                                     <------MYB46(1)                     <---------AHL20(2)                            ---------->DOF2   <---------RVE1(1) --------->AHL20(2)                    --------->YAB1   <------MYB83<---------ANAC46  <---------GLK1(2)  --------->AHL20(1)                   <---------YAB1   <---------AtMYB61  --------->ARR11(3)<---------AHL20(2)     <---------AHL20(2)     <---------AHL20(2) <---------AtMYB61  <---------ARR11(3)--------->AHL20(2)     --------->AHL20(2)   ----------->TBP--------->MYB55(2)<--- ------ANAC46   --------->AHL20(2)        --------->AHL20(2)  --------->AHL20(2)<------MYB83    ----- ----MYB46(3)   <---------AHL20(2)     <------------------------ANAC81 <---------ARR11(3)       <---- ---AtMYB61     --------->AHL20(1) <----------DOF2     <----------DOF2 --------->ARR11(3)   <--------   tttagattttttcgaaaataaaataaatttattttttctttggatttaattagttttcttttcattatataaagatgttggttggtgatggtgtttattt  15488900                                            --------->YAB1                                     <----------DOF2     --------->LBD16         --------->AHL20(2)   <---------LBD16           <---------AHL20(2)                        <---------DAG2 <-----------GT1            --------->AHL20(2) ---------->DOF2         <----------DOF2 ------AHL20(2)         <---------AHL20(2) <---------AHL20(2)       <-----------GT1 ---->AHL20(2)      <---------AHL20(2)    --------->AHL20(2)--------->At4g35610                    -- -----AHL20(2)      --------->AHL20(2)    <---------AHL20(2)----------->GT1<---------YAB1          <- -AHL20(2)        <----------DOF2    <---------DAG2        --------->GLK1(2)            <------ZmHOX2a(1)   taatttccgcatttgaaactctttaattcatttaatcaactttttttaataaagtttggagaagctaaatttgccttatgtttgtttgtaggaaatttag  15489000  Previous    Next  AGI:  At2g36880.1    Description:  MAT3 (METHIONINE ADENOSYLTRANSFERASE 3); methionine adenosyltransferase. similar to MAT2/SAM-2 (S-adenosylmethionine synthetase 2), methionine adenosyltransferase [Arabidopsis thaliana] (TAIR:AT4G01850.1); similar to MTO3 (S-adenosylmethionine synthase 3), methionine adenosyltransferase [Arabidopsis thaliana] (TAIR:AT3G17390.1); similar to MAT2/SAM-2 (S-adenosylmethionine synthetase 2) [Arabidopsis thaliana] (TAIR:AT4G01850.2); similar to S-adenosyl-L-methionine synthetase-like [Solanum tuberosum] (GB:ABB02634.1); similar to S-adenosylmethionine synthetase 3 (Methionine adenosyltransferase 3) (AdoMet synthetase 3) (GB:P43282); similar to S-ad Range:  from: 15486445    to: 15488491    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g36881.1    Description:  unknown protein Range:  from: 15488621    to: 15488782    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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