Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                --------->WOX13(1)      <------MYB46(1)                                               --------->At4g35610      <------MYB83   --------->HSFB2a(2)                   --------->ARR11(3) --------ANAC46      <---------HSFB2a(2)                   <---------ARR11(3)                      -- --------ANAC58 <---------ATHB12                   <---------At4g35610                     <---------TOE1(3) --------ANAC58 --------->MYB46(3)                 --------->At4g35610 <------ZmHOX2a(1)   <---------TOE2(3)   ctcgtgtttggtttcccaatcacccagaagaccaagtagcaccattttccatcagttgagacatcttctcagaggaatttcatcgaacacattcaggtta  15460400                                                     --------->ATHB12                                                     -------->HAHB4                                                    --------->ICU4                                             ----------->GT1                                           ---------->DOF2                                        --------->ANAC58                      ----------->HVH21           --------->GLK1(1)            --------->ANAC58                    --------->At4g35610          <---------ARR11(3)            --------->ANAC46                    <---------At4g35610          --------->ARR11(3)          ----------->RAV1(1)                   ------>ZmHOX2a(1) <------NtERF2 ------->ANAC46  ---------->DOF2      --------->AtMYB61              <-----------GT1       ------>NtERF2   caaaccagaacagatatcaaaaagaagaaattttcgaaaaccacacaaagtaaaatgatggaatggaattgttacctcctctgacaatgttgaggccgaa  15460500                   ================================HOX2a_HOX2a                   <------ZmHOX2a(2)                  <---------ARR11(3)                  --------->ARR11(3)                 --------->GLK1(1)           ----------->RAV1(1)          --------->ANAC58          --------->ANAC58          ----------->HVH21          --------->ANAC46        --------->CCA1(2)       --------->ARR14(2)       <---------ARR14(2)                                                                          --       --------->ARR11(1) ------->GAMYB                <-------GAMYB                              <--      <------ZmHOX2a(1) --------->ANAC58              <---------MYB46(3)                   <---------WOX13(1)      ====================HOX2a_HOX2a       <------ZmHOX2a(1) --------->ZAT6             <---------WRKY18(1)   =======================HOX2a_HOX2a  <-----------HVH21    <-----------GT1   <----------DOF2   <----   <------ZmHOX2a(1)    --------->ANAC58  >>>>>>>GRF7 ----------->GT1<-----------HVH21 <---------WOX13(1)   gaagaggaggatacgacagagatcacaacccagaccagttttgtcaggacaattgatggttataacactcgggtcaccttctttctccgattgactgatt  15460600           <---------ETT(1)        <---------SPL7              ---------->DOF2     <-----------HVH21           --------->TOE1(3)      <---------GLK1(2)   <------MYB46(1)    --------->ANAC46             --------->TOE2(3)     --------->At4g35610  <------MYB83        ----- ------->ZAT6                 <---------CCA1(2) <----------DOF2  <---------AtMYB61         ---------- -------YAB1----------->RAV1(1)------->TEIL     <---------DAG2----------->HVH21   <---------AHL20(2) -----ICU4--------->SPL7   --------------->AtSPL8      <---------At4g35610 --------->MYB59<---------At4g35610   atcactacgtcgtccgacaaaattcccatcttgtaccttaaagttttgaactttttcagcttctgtgatggtttagtttggtttttatttggagatgaga  15460700                   <---------ANAC58                   <---------ANAC58                   <---------ANAC46        ---------->DOF2                                                                <----------DOF2       <---------WRKY12                   <---------ANAC46     <---------TOE2(2)  ------>ZmHOX2a(1) -       <---------WRKY38(1) --------->At4g35610   --------------->AtSPL8        ------>ZmHOX2a(1)<---- ----->DOF2  --------->ALFIN1   --------->ANAC55(2)        ------->TEIL  <XXXXXXXXXXXXXXXXXXXXMIR390A/B -------------->ANAC81     <---------At4g35610 <---------MYB46(3)     <-----------RAV1(1)    *TSS <--   aagatagagtcaaaggtgttgtcgtgttgagcttaagtgattcgtcgtgttgttgtacttgaacccatgtttgtgttgttcctcctatgctttaagctct  15460800                                                               ---------->ID1                                                            <-----------GT1                                                      <---------AHL20(2)                                                     <---------AHL20(2)                                                     --------->AHL20(2)             ------>ZmHOX2a(1)                      <---------WOX13(1)     --------->GLK1(1)     <---------YAB1         <------------------------ANAC81  <---------YAB1       --------->YAB1          <---------At4g35610                     ------>MYB46(1) -------->YAB1         --------->TOE2(3)      --------->ARR14(2)                       ------>MYB83 -----YAB1  --------->TOE2(3)                 <---------ARR14(2)        <---------------AtSPL8 ----------CBF       <---------ARR11(3) <----------DOF2   <---------AHL20(2)<-------TEIL   <---------   aattgtgatttcttcctcaaaactatcttattaatcttctctctttggtatctgatttattttttctcgttttagaggtacatagaacccactaattgtc  15460900                                                                <-------GAMYB                                                               <------MYB46(1)                                                               --------->MYB52(2)                                                               <---------MYB46(3)                                                               ----------->GT1                                    --------->ANAC58           <------MYB83                      <---                                    --------->ANAC46         <--------P                          ----                            --------->AHL20(2)              <-------GAMYB                        ----                     --------->MYB52(1)                    --------->MYB111(2)                   <---                   <---------MYB52(2)                      --------->MYB55(2)                 <------                 <-----------GT1    --------->ANAC58       <---------MYB46(3)                <-------            <---------AHL20(2)    ---------->DOF2         <---------AtMYB61        <----------DOF2<--      --------->AHL20(2)    --------->AHL20(1)    <<<<<<<<<<<<<<<<<LFY           ---------->ID1  <--- ---CBF<---------AHL20(2)   <---------AHL20(2)  --------->AHL20(2)              <-----------GT1<-----   taattccattttatatttttaactaacaaattttttaaaagcaagtctaaataaacaatggtggttggttactagttttttttttcttttttttttggtt  15461000                                                                                                    <                                                                                                   --                                                                                                   <- ------MYB46(3)            <---------WOX13(1)                                             <---------- ----->MYB52(2)          --------->ATHB12                                                 ----------- ------->GT1            <---------YAB1                                                   ------------ ---MYB46(1)        <---------YAB1        <------ZmHOX2a(1)                              <----------- -GAMYB            --------->KAN4(2)     --------->LBD16                                 ------------ --MYB46(3)       --------->KAN4(1)    <---------LBD16                                   ------------ -----GAMYB       <---------KAN4(1)    <-----------RAV1(2)          ------->TEIL         <----------- ---MYB83        ------->TEIL     ------->TEIL                      <-----------ARR10    <----------- ---P       --------->At4g35610<---------YAB1    <-----------GT1   <---------CCA1(2)    <------------   ggttactagttattagatgaatattcttgattgatgaatattcaggagaattatctacttgtaggcagtgtatctaatccaaattttgtgtcccaatttt  15461100   ------>ZmHOX2a(1) ------>ZmHOX2a(2) ------ZmHOX2a(2) ------->ARR14(2) --------ARR14(2) -----AGL15                                                 --------->ZAT18 ---->AGL15                                  <---------AHL20(2) ----->AGL1                                 --------->AHL20(2) ------AGL1                                 --------->AHL20(1) ----->AGL2                                 <---------AHL20(2)     <-----------RAV1(1) ----->AGL3                                 <---------AHL20(1)<---------At4g35610 ------AGL3                            <---------TOE2(3)    <---------ZAT18                    ------ ------AGL2                   <----------DOF2--------->AHL20(2) <----------DOF2              ------->TEIL -----AGL1       --------->YAB1  <---------YAB1        <---------YAB1                      <---------ZAT18   ggatcctagtaattgaaaatcatatcggaatgcttttgattaagaatttatttgagtattagtgagcttttgttgttcattttggaattttagtgaacct  15461200          --------->AHL20(2)                       ---------->DOF2          <---------AHL20(2)                     ------>ZmHOX2a(1)         <---------AHL20(2)               <---------ZAT18     <----------DOF2        ----------->HVH21         <---------AHL20(1)               --------->ZAT14  <------ZmHOX2a(1)   --------->ANAC58         --------->AHL20(2)      --------->DOF5.7(2)--------->DAG2             --------->ANAC58------   --------->TOE2(3)       --------->At4g35610<---------------AGL15        --------->YAB1 --------->ANAC58 --->TOE2(3)               <---------At4g35610--------------->AGL15       <---------ZAT6  --------->ANAC58   cagtttcttaatttaattgtattttagtcagaagcgtttactagtctactcctaaaagtgaggactttaggcgatagtgataagcaaatgacaagtccta  15461300  Previous    Next  AGI:  At2g36840.1    Description:  ACT domain-containing protein. similar to ACT domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G39570.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63016.1); contains InterPro domain Amino acid-binding ACT; (InterPro:IPR002912) Range:  from: 15458652    to: 15460793    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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