Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           <---------MYB52(2)                                              --------->TOE2(3)                     <------ZmHOX2a(1)                                              --------->TOE1(3)       ----------->GT1     --------->ANAC58                                         <---------MYB52(2)   ------->GAMYB       --------->ANAC58                                         --------->MYB46(3)--------->MYB52(1)     --------->ANAC58                                    <---------ANAC55(2) --------->ANAC58   <---------ANAC58                     ----------->GT1----------->GT1     --------->ANAC58   <---------ANAC58                 <---------TOE2(3)  --------->ANAC55(2) --------->ANAC46  --------->MYB52(2)      <-- -->YAB1        ---------->DOF2   <---------ATHB12 --------->ZAT6     --------->ALFIN1    --------->ANAC58   catcaagagaactcaaactaaagtagtaatttctcaataagtaacaaaccttaacaccaagtaaccgaagaggtgttacttggccaggaacaacgcattc  15458100                                                <---------ARR14(2)                                                --------->ARR11(1)                                                --------->ARR14(2)                                               <------ZmHOX2a(1)                                          <---------ALFIN1                           --------->AHL20(2)                                          ----------->RAV1(1)                     <---------ICU4                                        ------>MYB46(1)                --------->ANAC46                                        ------>MYB83                   --------->ANAC55(1)                <-------TEIL          --------->AtMYB61                --------->ANAC58            <---------------AtSPL8    <---------MYB111(2)              --------->ANAC58        --------->ARR14(2)           <---------ZAT2        <---------At4g35610    <--------HAHB4        <---------ARR14(2)           --------->ZAT2        --------->At4g35610    --------->ATHB51      --------->LBD16               ------>MYB83<---------GLK1(2)      --------->ANAC55(2)     <---------ANAC46               ------>MYB46(1)        <---------ZAT14       <---------ATHB12    <---------LBD16--------->At4g35610<---------MYB111(1)  --------->ZAT14       --------->ICU4   ------>ZmHOX2a(1)               <---------ALFIN1     <---------At4g35610  ------->GAMYB     ------ -------At4g35610  <---------At4g35610--------->DEAR3(1)--------->At4g35610-------->P<---------AHL20(2)   aggtcctgcggattcaagtacagcttccatcgcaaacccacctcccacaggattcggatgctgcagagattacacgcaaccccataattaaaaaaaactg  15458200                                                           <---------ARR14(2)                                                           --------->ARR14(2)                                                        <---------ANAC58                                                        <---------ANAC58                                                  --------->ARR14(2)                         --------->LBD16       <---------ANAC46                        --------->ANAC58       <---------ANAC55(2)                        --------->ANAC58      --------->RAP2.6(3)                        --------->ANAC46     --------->MYB52(1)                       <---------LBD16      ----------->TGA1                <---------WOX13(1)          ----------->HVH21                                   -----              --------->ATHB12         --------->TOE1(3)--------->ANAC55(2)                   -------             <---------AHL20(2)    --------->MYB46(3)   <---------ANAC46                    <--------  --------->KAN4(2)  --------->ARR14(2)--------->TOE2(3)<---------ANAC55(2)           >>>>>>>>>GATA-1 ----->GT1   <---------YAB1      --------->ANAC46 <---------ARR14(2)<---------LBD16 ----------->GT1   tgaaaattcccaaatttgattgcaatccgcaaaacaaacaaccttcatgacggaaatggcgtaatcggtttctgggttttgagagatagataaaaccgga  15458300                                    --------->ANAC46                                    --------->ANAC58                                    --------->ANAC58        <-----------HVH21                             --------->ANAC46              <---------ANAC58                 <--------                             --------->ANAC58         <---------ZAT2                        <--------        ------>ZmHOX2a(2)    --------->ANAC58         --------->At4g35610               --------->ARR11(3)      --------->ARR11(3)  ------>ZmHOX2a(1)           --------->ZAT2   <----------DOF2  <---------ARR11(3)      <---------ARR11(3)  ----------->HVH21           <---------At4g35610           ---------->DOF2 ----->DOF2               ----------->TGA1         ------>ZmHOX2a(1)------>ZmHOX2a(1)<---------TOE2(3) -->LBD16               ----------->RAV1(2)       --------->TOE2(3)<---------ALFIN1--------->AHL20(2) -LBD16 =========================HOX2a_HOX2a <-------TEIL  <---------ANAC58  --------->ANAC46 <------   gagcgactgatcttaggcactggtcttcctgacgaaactcgccatggtgcatcctcagctagcgtcgctcctcctttcttcgccattaaagatttcgttt  15458400                                        <---------AHL20(2)                                       <---------AHL20(2)                                       --------->AHL20(2)      <---------HSFB2a(2)              --------->AHL20(1)                                          --  <-------GAMYB                        <---------AHL20(1)                                          <- -ANAC58                      <---------ZAT18  ---------->DOF2<---------ARR11(3)                   -- -ANAC58   --------->At4g35610--------->ZAT18<---------------AGL15           ---------->DOF2       <- ---MYB52(1)    --------->ARR14(2)<---------MYB52(1)          --------->ARR11(3)         <----------DOF2   ttttcgttggagaagcagaattcgaaattgagagcccttaatttattctcaaagtggatagaaagatttatctaaattgcaaagtagaaaactttgtggt  15458500       --------->ARR14(2)       <---------GLK1(2)       <------------CBF                                                                       -------       <---------ARR14(2)                                     <----------DOF2             <---------YAB1     *TSS      <---------ANAC58                               <---------DAG2        --------->AHL20(2) <----------DOF2                               <---------TOE2(3)              --------->ANAC55(2) ------->ZAT2  <---------ANAC58                <---------TOE1(2)              <---------ANAC55(1) --------At4g35610         ---------->DOF2     <---------TOE2(2)  <-----------GT1   <---------AHL20(2) ------->At4g35610<---------ZAT18   <------NtERF2        ------>ZmHOX2a(1)    <---------ANAC55(2) --------ZAT2  <---------ANAC46    ----------------------->TaNAC69(2)  <---------ALFIN1 <-----------GT1   cagctttcggattgtcttcgtgtgcttcttaaagagtcgccatttttcttaggtttctccttcactttttgcccctcattaagtgtttaattacgatata  15458600                                        <---------------AGL15                                        --------------->AGL15                                       <----------ID1                               <---------ZAT2                                      <---------ZAT14                               --------->ZAT2                                      --------->ZAT14                               --------->At4g35610                               --------->ANAC46                         <---------ARR11(3)    ----------->GT1                 --------->ANAC46                         --------->ARR11(3)    <----------ID1                ----------->RAV1(1)                         <-----------ARR10 ---------->DOF2 <---------At4g35610 <---------ALFIN1 --->DOF2  --------->AHL20(2)  <---------At4g35610     <----------DOF2<---------YAB1        <--------   gccactcacttcatataatatgagaaaaatctcagctcaatacaacaaagagaaaaactttagcttcttactatgaaacccacacagtactcatttacaa  15458700                                                                                           --------->ARR11(3)                                                                                           <---------ARR11(3)                                                                                          <---------CCA1(2)                                                                               <---------ANAC58     <             <---------DAG2                                                    <---------ANAC58   ---     --------->HSFB2a(1)                                                       <---------ANAC46   ---    <---------TOE1(2)   <-----------GT1          ---------->DOF2          <-----------RAV1(1)    ---- ---GT1      <----------DOF2                 ---------->DOF2    --------->ARR14(2)      --------->CCA1(2)   cattccaacgttctgcttttctctacttacaatttctcatcaacacaaaaagaaagactcaaaccatatatacacactgtggcttatcagatatatctcc  15458800                                    ----------->GT1   --------->YAB1                  --------->DAG2                                   --------->MYB52(1) ---------CCA1(2)                 ---------->DOF2  <-----------GT1               <---------At4g35610 ------>TOE1(1)        <---------ICU4 <----------ID1 --------------->AtSPL3      --------->At4g35610 ------>TOE2(1)        --------->ATHB12     <---------ARR11(3)             <---------TOE1(3) -->ZmHOX2a(1)    <-------TEIL --------->YAB1  <---------YAB1              <---------TOE2(3)------>ZmHOX2a(1)   tcgtatcatattaatctacatacactcattgcatcataaagtgacaaatcttatagccatactctttcgatgagtctgaggttagctaatggtcctatac  15458900                                                                        --------->ZAT2                                                                   <------MYB83                                                            <---------LBD16                                                           <---------LBD16         <---------YAB1                                 <----------DOF2 <---------ZAT2              <        <-----------GT1                                <---------ANAC58 <---------At4g35610      ----     --------->ARR11(3)                                <---------ANAC58 --------->At4g35610  <-------     <---------GLK1(2)                          <---------CCA1(2)  <------MYB46(1)           XXXXXXXX     <---------ARR11(3)  ---------->DOF2      ------>ZmHOX2a(1)  <---------WOX13(1)   --------->WRKY38(1)   tctgaaagattttcattcccagcccatcaaagttttccatacttcttcctctatcttgcttctcgggattggtaagctgtcttcttcgttgatcaacact  15459000  Previous    Next  AGI:  At2g36835.1    Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN81061.1) Range:  from: 15456682    to: 15458505    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g36840.1    Description:  ACT domain-containing protein. similar to ACT domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G39570.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63016.1); contains InterPro domain Amino acid-binding ACT; (InterPro:IPR002912) Range:  from: 15458652    to: 15460793    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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