Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                     <----------DOF2                                                               ------->GAMYB         <---------YAB1                            --------->AHL20(1)                               -     <---------GLK1(2)                             <---------ARR11(3)                              <- ---------->RAV1(1)                                <---------AHL20(1)         <---------YAB1<-------- ------>GAMYB                  <---------YAB1      --------->ARR11(3)    --------->YAB1     <-------- ------->MYB46(3)<------ZmHOX2a(1)         --------->CCA1(2)  --------->MYB46(3)           --------->ZAT2 ----->MYB52(1)<---------TOE2(3)        ----------->ARR10   <-----------GT1<---------YAB1  <---------At4g35610   aacgacagattataagtaaggaagaaacaaatgactatagattagatatgaaatatttttagtaaccatctttagttataatttttgttttggagcttgc  15452100             <---------ANAC46          <---------MYB52(1)  <---------ARR14(2)  <---------ZAT14  --------->ZAT14                                           <---------ANAC55(2)  --------->ARR14(2)                                        --------->ANAC58 -------->LBD16           <---------ALFIN1                  --------->ANAC58 --------ANAC46      <-----------GT1                        ----------->GT1 -ANAC58 <---------At4g35610                             <---------ATHB12                          -- -ANAC58 --------->At4g35610                       --------->ZAT6 <-----------GT1     ----------->GT1   tccgtatactcagttgagtatttttaccacacatatatcaagactaaattctaccactaatcaagtaaaaacctcttagcaaaatagttggagaaaaaca  15452200                                                                                                   --                         <<<<<<<ZML2--------->KAN4(2)             ---------->DOF2                  <-                      --------->HSFC1(1)                  --------->DAG2                      -------                      --------->HSFB2a(2)         --------->GLK1(2)                           -------                    ------>ZmHOX2a(1)   <---------HSFB2a(2)  <----------ID1                   -------                <-----------GT1   <------ZmHOX2a(2)      ---------->DOF2                 ----------->HVH21       ----------->GT1<---------HSFB2a(2)         <---------ARR14(2)                   <---------ICU4  --------->AHL20(2)=====================HOX2a_HOX2a <---------YAB1                    --------->YAB1 ------->YAB1<---------AHL20(2)   <---------ATHB12--------->ARR14(2)          <---------------AtSPL8   agaataaaatcgtattattttcctctagaactatcgatcattcgagagagagaatatgaaaaagggacaaaagctctatacatgtacaaacatgacaagt  15452300         <---------ANAC46         <---------O2      <---------At4g35610         --------->O2  --------->ARR14(2)        ------>NtERF2<---------DEAR3(2)       <---------ALFIN1<---------ARR14(2)     ------>NtERF2   <------MYB83    --------->ANAC58 <---------MYB46(3)    --------->ANAC46 <------MYB46(1)    --------->ANAC58<---------DEAR3(1)                                                    --------->MYB46(3)   <---------LBD16 <---------ORA47(1)                                          --------->AHL20(2) ------->ICU4    <------MYB46(1)                                               <---------AHL20(2)   - --------YAB1    <------MYB83                      ------->TEIL            <---------AHL20(2)      <- -->ANAC58      <---------AtMYB61        ---------->DOF2                   --------->AHL20(2)    ---- -->ANAC58  <---------TOE2(2)<----------DOF2   --------------->AtSPL8     <---------AHL20(2)--------- -->bZIP60(2)  <---------WOX13(1)       --------->YAB1                  <---------ICU4 ----------->HVH21   cattatccgccacgtagattggtcggttccgcttcgctggaattatagcgatgtacttgtttagcctgttttcaaaattatttaaatctctaaccgctcc  15452400                                                                        --------->CCA1(2)                                                                 <---------ZAT2                                                                 --------->O2                                                                 --------->bZIP60(2)                                                                 --------->TGA1a                              <---------AHL20(1)               --------->DEAR3(1)                              <---------AHL20(2)               <---------ALFIN1                           <---------AHL20(2)                 --------->DEAR4(2)                           --------->YAB1                     <------NtERF2     --------->AHL20(2)    --------->AHL20(2)                 --------->RAP2.3(1)     <---------ICU4     --------->YAB1                        --------->ORA47(2)    <---------ATHB12  <---------YAB1           <-----------HVH21------>NtERF2    <---------ATHB51 --------->TOE2(3)    <---------ARR14(2)  --------->ATERF1(1)    --------->AHL20(2)<---------AHL20(2)  --------->ARR14(2) <---------ATERF1(1)    <---------AHL20(2)--------->AHL20(2) ----------->HVH21   <---------RAP2.3(1) -------->AHL20(2)------>MYB46(1)       <---------MYB52(1)   ------>NtERF2 --------ATHB12   ------>MYB83--------->AHL20(1)            --------->bZIP60(1)                  ---- ----->WOX13(1) <---------MYB111(1)    --------->LBD16      <---------bZIP60(1)    --------->ZAT18 >At4g35610    --------->ANAC46      <---------LBD16        --------->PCF2         <---------ZAT18   aatcaaataatttctccaccaaatattaataatatatcatccggtaaccggtcaccaaaatggcgccacctcagatataagtaagagcacatagtagacc  15452500                                                                --------->YAB1                                                               <------ZmHOX2a(2)                                                           --------->SPL7                           <                                                         <---------SPL7                           ---                                                         <---------RAP2.6(3)                      <--                                                         <-----------HVH21                      <----                                                        --------->DEAR3(1)                   <-------                                                      --------->ZAT2    <------ZmHOX2a(2)    <-------                                  --------->ARR11(3)  --------->At4g35610     --------->HSFC1(2)<----      --------->YAB1          --------->HSFB2a(2)     <---------At4g35610--------->YAB1     ---------    *TSS                <---------ALFIN1       <---------CCA1(2)<---------ICU4<---------HSFC1(2)----- ------->GT1          <---------ALFIN1     --------->TOE1(3)   <---------ATHB12             ---------   agaaaaaatcatcaaatccatctcccactcttctagcatcttgaagcttaaatctcagccgtccgatcatgccgatcagaaacatcgccattggccgtcc  15452600                                     --------->At4g35610                                     <---------At4g35610                                    <---------MYB46(3)                                   --------->WRKY38(1)                                  --------->ATERF1(1)                                  <---------MYB52(1)                                 <-------GAMYB                           <---------DEAR3(2)                                <---------DEAR3(1)                       <---------MYB46(3)                               <------NtERF2                            <---------TOE1(2)                               --------->ATERF1(1)                      <---------DEAR3(1)         --------->MYB46(3)   <---------RAP2.3(1)                      <------NtERF2        <---------ALFIN1      <---------ERF1                           --------->ATERF1(1)      --------->DEAR3(1)      <---------ORA47(2)                       <---------LBD16   --------->ANAC58           <---------DEAR4(2)                      <---------RAP2.3(1)   --------->ANAC58           ------>NtERF2                           ------>NtERF2 ---------REM1(1)            <---------RRTF1(3)                      <---------DEAR3(1) ------>At4g35610            <---------DEAR3(1)                     --------->ATERF1(1) -------At4g35610            <---------RAP2.3(3)                    <------NtERF2 -----HSFB2a(2)          ---------->DOF2                           <---------ATERF1(1)       <------- --RAP2.6(3)            ---------->DOF2                            <-----------HVH21        <-------- --SPL7------>NtERF2 --------->TOE1(3)                       <----------DOF2           <---------AtLEC2 -------RAV1(2)      --------->TOE2(3)      <-------TEIL    ------>ZmHOX2a(2)          <---------ANAC58 >RAP2.6(2)<-----------HVH21 <---------RAP2.6(2)          <---------ARR11(3) <-----------RAV1(2) ---->HSFB2a(2)    ------>NtERF2<---------ANAC46          --------->ARR11(3)<-------TEIL    <-------- >DEAR3(1)--------->ANAC46   <---------RAP2.3(2)      <----------DOF2--------->DEAR3(1)<---------ANAC58   agatgaagccacccgtcccgatgccttaaaggcggcgttggctgagttcatttcaactttgatctttgtcgtcgccggttcaggctctggcatggctttc  15452700                                                    --------->ALFIN1                          <------NtERF2                             ------>ZmHOX2a(1)  --------->ZAT14                              ------>NtERF2                       <---------ALFIN1         <---------ZAT14                           <------MYB83                       --------->AtMYB61     --------->ZAT2                              --------->MYB111(1)                      --------->MYB46(3)     <---------At4g35610                        <---------MYB52(1)    --------->ZAT18--------->MYB46(3)        --------->At4g35610                     <-----------RAV1(2)  --------->ZAT2   --------->ATERF1(1)      <-----------RAV1(1)                      ================  --------->At4g35610------>NtERF2        --------->At4g35610                <---------DEAR3(1)    <- ---DOF2          <---------ATERF1(1)     <---------At4g35610               ---------->ID1<------MYB46(1) -ANAC58          ------>NtERF2           --------->ZAT2              <---------HSFB2a(1)--------->ALFIN1 -ANAC58    --------->MYB52(1)            <---------ZAT2       --------------------->WRI1<---------MYB46(3)   aacaagctcactgaaaacggagccaccactccttctggtctcgtagctgctgcagtggctcatgcctttggactcttcgtcgctgtctcagttggtgcca  15452800                            xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                           <------NtERF2                           <---------MYB52(1)                          <-----------TGA1                          ------>NtERF2                          <-----------HVH21                          <---------RAP2.6(3)                         <---------bZIP60(1)                         --------->RAP2.6(2)                         <---------ATERF1(2)               --------->DOF5.7(2)              --------->TOE2(3)            --------->ATHB12              --------->TOE1(3)           <---------YAB1             --------->ANAC58           <----------DOF2             --------->ANAC58  <----------DOF2    ----------->GT1             ------>ZmHOX2a(1) <----             <---------ANAC55(2)       <---------ANAC58              --------->LBD16           <-----        <---------ZAT18  --------->bZIP60(1)      <---------MYB46(3)<---------ANAC46          -------    <-----------RAV1(1)  --------->ATERF1(2)  <---------AtMYB61   ------>ZmHOX2a(1)    <---------WOX13(1) ===============RAV    ------>NtERF2   <---------ANAC58<---------bZIP60(1)<---------ARR14(2)  <------ --------ARR11(3)<---------DOF5.7(2)  --------->ABI4(2)--------->bZIP60(1)--------->ARR14(2)  <------   acatctctggtggacacgttaaccctgccgtcactttcggtgctttcattggtggtaacatcactctcctccgtggtatcctctactggattgctcagct  15452900          <-----------HVH21         <---------O2                           <------MYB83         --------->O2                           <------MYB46(1)       <-----------HVH21                     <---------ANAC58                         <----------DOF2     <------NtERF2                           <---------ANAC46                         <---------DAG2     --------->ATERF1(1)                     <---------ANAC58                      <-----------------AGL3    ------>NtERF2                           <-----------------------TaNAC69(2)     ------>ZmHOX2a(2)    <---------ATERF1(1)                  <---------MYB52(1)                       <<<<<<<<<GATA-2   --------->ARR14(2)                 <------NtERF2                               <<<<<<<<<GATA-3   <---------ARR14(2)                --------->MYB52(1)                           <---------GLK1(1)  --------->At4g35610                ------>NtERF2                                <<<<<<<<<GATA-4  <---------ZAT2                    --------->DEAR3(1)                            <<<<<<<<<GATA-1----  <---------At4g35610               <---------ALFIN1                              <------ZmHOX2a(2)  --------->ZAT2          ------>ZmHOX2a(1) <------NtERF2                        <---------ARR11(3) ------DOF2<------NtERF2 --------->TOE1(3) ------>NtERF2                         --------->ARR11(3) ----GLK1(2)             --------->TOE2(3) <---------MYB46(3)            <---------DAG2        <----- -->At4g35610 <---------ANAC58   --------->ANAC46                <----------DOF2 <---------AGP1<----- ---ZAT2 <---------DEAR3(1)      --------->ANAC58            -------->P  <----------DOF2       <----- ---At4g35610 <---------ANAC58   --------->ANAC58          <---------MYB111(1)  <---------CCA1(2)----   tctcggctccgtcgtcgcttgcctcatccttaaattcgccaccggtggcttggtatgtcaaactaccctttagccctttattagatctctttttggacct  15453000  Previous    Next  AGI:  At2g36830.1    Description:  GAMMA-TIP (Tonoplast intrinsic protein (TIP) gamma); water channel. Identical to Aquaporin TIP1-1 (TIP1-1) [Arabidopsis Thaliana] (GB:P25818;GB:P21652;GB:Q42075;GB:Q8L5T8); similar to TIP2 (TONOPLAST INTRINSIC PROTEIN 2), water channel [Arabidopsis thaliana] (TAIR:AT3G26520.1); similar to tonoplast intrinsic protein bobTIP26-2 [Brassica oleracea var. botrytis] (GB:AAN05780.1); contains InterPro domain Aquaporin; (InterPro:IPR012269); contains InterPro domain Major intrinsic protein; (InterPro:IPR000425) Range:  from: 15452504    to: 15453653    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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