Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              --------->AHL20(2)            <---------AHL20(1)            --------->AHL20(1)            <---------AHL20(2)           --------->AHL20(2)                             ---------->DOF2   <---------TOE2(3)                              <---------DOF5.7(2)  ---------->DOF2                             ----------->GT1                           ----------->GT1 ------->TOE2(3)              <---------TOE2(3)   ---------->DOF2                   ---------->DOF2 -   acattaaggcgaaataaattgttttatagacttacgttgtatcatgtatggttaaagtcttaaagagatagagaataacaaatacacaaagtgtataaaa  15399800                                           <-----------HVH21                                 ------>MYB46(1)                                 ------>MYB83               ---------->DOF2                               --------->AtMYB61 --------->ANAC46                               ------->GAMYB<------ZmHOX2a(2)                 <-----------GT1 --------->DOF2  --------->CCA1(2) <---------ATHB12     ----------->GT1 <---------TOE2(3)   cataaagaagagacttgagaaatgagttctcaaccaaatcaaaccgatcacacacgattagtaaaagaaaaatttagatttaactgcaatagttttataa  15399900                                                                            ----------->RAV1(1)                                                <---------ICU4           --------->ANAC46                                               <---------YAB1     --------->YAB1          <---------MYB46(3)                                               --------->ICU4  <-----------GT1            -----------                                             --------->YAB1   --------->AHL20(2)  ---------->DOF2  <-                                --------->AHL20(2)    ------>ZmHOX2a(1) ------->GAMYB   <---------At4g35610           --------->YAB1 ---------->DOF2 <---------At4g35610--------->AHL20(2)--------->TOE2(3)   --    --------->ZAT6----------->GT1     <-----------GT1<---------MYB59 ---------->DOF2    <-------GAMYB   attctaaaactactcataagaggttaaacaaagtttaaattttcaactcataattcctaacaatttaactataacgcacaacataaatgcagttgttaat  15400000                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                <----              <---------GLK1(2)                                     --------->ANAC58         <-------  <------ZmHOX2a(1)                                                 --------->ANAC58  ----------->GT1 >GT1    --------->MYB52(1)     <-----------------AGL1  --------->ATHB12             <---------TOE2(3) --------HSFB2a(2)     --------->ANAC46              <------------CBF           --------->AHL20(2)--- ------->HSFB2a(2)    <XXXXXXXXXXXXXXXXXXXXMIR426 ------------>CBF  --------->ANAC46 --------->DAG2   tctaggaaaaaaaacagattagtaagcgcaagttttcgaaatgggcattaggcccaattgatttatcttcaagaaatacccattaaaaaggttaatattt  15400100            <---------ZAT14  --------->ARR14(2)  <---------ARR14(2)                      <-----------GT1 <---------GLK1(1)                 <---------ANAC58 ------>ANAC55(2)                  <---------ANAC58                             <---------CCA1(2) ------>ANAC58         ----------->GT1  <-----------GT1              <------NtERF2 ------>ANAC46   ---------->DOF2   <---------ANAC46         <---------ZAT14   ------>ZmHOX2a(1) -------GT1 --------->ZAT14    <---------At5g28300          --------->ZAT14  --------->TOE2(3)  ----- --ICU4 <---------ALFIN1--------->At5g28300       *TSS   ------>ZmHOX2a(1)<---------ARR11(3)   <----- ------>ANAC58<----------DOF2 <-----------GT1<---------CCA1(2)   <---------MYB46(3)        ----------   acgaaatctgccactgctctaaagactgtaatttactgcgtttttctctatcttccttcctctccagtggctgcaaaatcctaaatctcaccgaaaagga  15400200                                 <------ZmHOX2a(2)        --------->TOE2(3)                                --------->ARR14(2)        ----------------->AGL3                                <---------ARR14(2)      ------->TEIL                     ------>ZmHOX2a(2)                                --------->AGP1   ------>MYB83                           <------ZmHOX2a(2)                             --------->HSFB2a(2) ------>MYB46(1)                       <---------ARR14(2)     ----------->GT1       ------>ZmHOX2a(1)<-----------GT1                         <-------TEIL     <---------ZAT6  <<<<<<<<<TBF1<-------TEIL --------->AtMYB61   <---------At4g35610 --------->ARR14(2) ---->ARR11(3) ------>ZmHOX2a(1)<---------ARR11(3)   ----------->HVH21             --------->ARR14(1) -ZmHOX2a(1)   =========================HOX2a_HOX2a --------->ANAC46               --------->CCA1(2) >DOF2  <-----------GT1    =============HOX2a_HOX2a----------->RAV1(2)             --------->GLK1(2)   ttttgtattgttacatcctcttcttcttcctccagatccatgtatgaaacctcccctgaaccctaatttagctatcgaatttgagattcgatccgatgtt  15400300                                                                                                  ---                                                                                                  <--                                                                                                 ----                                                                                               ------                                                                                           <-------TEIL                                                                                          --------->GLK1(2)                                                                                          --------->ARR14(1)                                                                                         --------->ARR14(2)                                                                       <---------ANAC58  --------->ARR11(1)                <---------ANAC58                                       <---------ANAC46  <---------ARR14(2)                <---------ANAC58                                    <---------MYB52(1)   <---------GLK1(2)             <---------MYB52(1)                                   --------->MYB52(2)  <--------------      <---------ARR14(2)                                         <-------TEIL  ------>ZmHOX2a(1) ----      <---------ARR11(3)                                        <---------MYB52(1)    ---------------      --------->ARR11(3)                                      <---------HSFB2a(1)    <---------------      <-----------ARR10                                       <---------HSFC1(2)     <---------------      <---------ARR11(1)       <-----------GT1                <---------DEAR3(2)     ----------------      --------->ARR14(2)  --------->AHL20(2)                  --------->HSFC1(2)     ----------------     <---------CCA1(2) --------->YAB1  --------->YAB1--------->GLK1(1) <---------ANAC58<---------TOE1(2)   tacttccaaatcttcgtttcgtctctgataatataactccatcgtaatagaactgatttcaagacggttcgtttcgttttcctctatcccagattcggaa  15400400                                      <---------ICU4                                      --------->YAB1                               <-----------ARR10 -------->P                    <---------ARR11(1) ------>At4g35610              ------->TEIL -------At4g35610              --------->ARR14(2) ----->ANAC58                  --------->GLK1(2) ---->DOF2                     <---------ARR14(2) -AGL15                       <---------GLK1(2)                                      <---------ANAC58 ----->ANAC58                 <---------ARR14(1)                                     <---------ANAC58 >AGL15                       <---------CCA1(2)                                      <---------ANAC46 --AGL1                     --------->LBD16                              <---------ANAC46 --AG                      --------->HSFB2a(2)               <---------ANAC58    --------->GLK1(1) ->AGL1                    <---------HSFB2a(2)               <---------ANAC58    <---------GLK1(1) ->AGL2                   <---------LBD16                <---------MYB52(1) --------->REM1(2)   agctaccttgttttgaactccatagttttcccgaatctattcatcacttgctactatcagtttgcttcttctgttctgtgtagatttccttggagggggt  15400500                                                                                    <------MYB46(1)                                                                                    <---------MYB46(3)                                                                                  <---------MYB52(1)               <-------GAMYB              --------->LBD16                         <--------P              <---------ANAC58         <---------ZAT18                           <-------GAMYB <-----              <---------ANAC58      <---------ANAC58             --------->WOX13(1) <------MYB83<----              --------->MYB52(2)    <---------ANAC58       <---------MYB52(1)   <---------MYB46(3)  -           --------->ARR14(2)   <---------ARR11(3)       <------MYB46(1)   ---------->DOF2<---------ETT(2)           <---------ARR14(2)   --------->ARR11(3)       <------MYB83 <---------LBD16<---------ANAC46      --------->ANAC46    <---------TOE2(3)             --------->MYB59   <---------MYB52(1) <-------   ----------->HVH21   <---------ATHB12--------->ZAT18<---------MYB52(1)--------->LBD16   --------->ETT(2)   ttgttttgacgcagtttcgttgcaaatgaaggaagatttagtgcccgagtcgaacagttcggtttggcaatctccggttaagcggttggctgtagacggc  15400600              <---------YAB1            <------MYB46(1)   <---------ANAC46  --------->ALFIN1 --------->ZAT14 --------->ZAT18 <---------ZAT14                                           <---------WRKY12 -NtERF2    <------MYB83  <------ZmHOX2a(1)             --------->ANAC58 -----ANAC46<---------At4g35610              <---------AHL20(2)                    <<<<<<<ZML2 -------->ALFIN1    <------ZmHOX2a(1)       --------->AHL20(2)     <---------AHL20(2)    <------ZmHOX2a(1) --DEAR3(1)<---------MYB46(3)  --------->At4g35610      --------->ANAC58     --------->ZAT6   gagtgtggtgaggctggtgataggagtaggactagctgtaagagaattaaaacgactcaagtcaatggttttattgtttacactagaactaggaagacta  15400700  Previous    Next  AGI:  At2g36720.1    Description:  PHD finger transcription factor, putative. similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT2G27980.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62972.1); contains InterPro domain Acyl-CoA N-acyltransferase (InterPro:IPR016181); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 15400150    to: 15406497    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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