Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    --------->ATHB12                                  --------->ATHB51                  --------->ZAT6  -------->ATHB1    --------->AHL20(2)           <---------ATHB51            <----------ID1   <---------AHL20(1)            <---------YAB1           ---------->DOF2   --------->AHL20(1)            <---------AHL20(2)  ----------->GT1                --------->CCA1(2)  --------->AHL20(2)             --------->ICU4   --------->CCA1(2)                <---------ARR14(2) ------------>AGL15    <---------YAB1            <---------ARR14(2) --------->ARR11(3) >YAB1          <-----------GT1  --------->AHL20(1)<-----------------------TaNAC69(2)         ------- -ICU4     --------->YAB1---------->DOF2         --------->ARR14(2) <---------ARR11(3) <------ZmHOX2a(1)   ctaaatatatatatcatattacactataaaagaaaattattgagcaatggagataggggaaaaagaacaagagcttggagttgaagataggacctataag  15397900                                                                                                    -                                                                                                   --                     <xxxxxxxxxxxxxxxxsmallRNA(i)                                         >>>>>>>>>>ABI3               <---------YAB1                                                             >>>>>>>>>>FUS3             --------->YAB1                                                              --------->ANAC58            --------->ICU4                                                               --------->AtLEC2       <---------DOF5.7(2)                    ----------->RAV1(1)                        --------->ANAC58       --------->MYB52(1)     <---------ARR11(3)            <----------DOF2   <-----------GT1  <----- -->YAB1<---------TOE2(3)     --------->ARR11(3) --------->TOE2(3)<---------ICU4   --------->MYB46(3)   aacccgaattaacgatgatgagagtcttggaagagcttaaatcagggacaacatcaatggcgctttgaacattgctgaagttaccacaaccatgcaaatc  15398000                                                                                        <---------YAB1                                                                                        --------->ICU4                                                                                      --------->YAB1                                                                             ----------->GT1                                                                             <---------MYB46(3)                                                                            --------->ALFIN1                                                                      <-------TEIL    -------->HAHB4                                                                   <---------MYB46(3) <---------ICU4   <---------WRKY12                                            --------->ATHB12      <---------YAB1   <---------WRKY38(1)                       <-------TEIL     <---------AHL20(2)     --------->ICU4 ------>GAMYB                             <---------ANAC58    --------->AHL20(1)   <---------ICU4 ------->MYB46(3)                      ----------->HVH21      --------->AHL20(2)   --------->YAB1   - ----ATHB12              <---------AtMYB61<---------ANAC58    <---------AHL20(1)  --------->ICU4 <---   aacagtcaacacaagagaagtcttgtattggtgtctaagccttgacgtccatttctcacaacattttattggttcatggtggtgataatgatgatggtga  15398100                                                                                                <----                                                                                                =====                                                                                           --------->HSFB2a(2)                                                                                           <---------HSFB2a(2)                                                                                          ------>ZmHOX2a(2)                                                                                          ===========                                                                                         ============                                                                                         --------->CCA1(2)                                                                                         <------ZmHOX2a(2)                                                                                        <---------ARR11(3)                                                                                        >>>>>>>>>GATA-1            <---------YAB1                                                              >>>>>>>>>GATA-3            --------->ICU4                                                              >>>>>>>>>GATA-4      <---------AtMYB61                                        <---------MYB52(1)       --------->AGP1 <---------MYB46(3)  <---------ANAC46         <---------AHL20(1)                        >>>>>>>>>GATA-2 -------->ALFIN1  <---------AtMYB61           --------->ARR11(3)    <---------REM1(1)   --------->ARR11(3) ------AtMYB61 <---------AtMYB61              --------->AHL20(1) --------->MYB52(2)    --------->GLK1(1)   tggtggtgatggtgatgatggtggtgtttgtgtccaaaaaatgttgaatattttgctaatgctccgatagttgtagctatagaagagagagatctagagg  15398200                                                     <-------GAMYB                  <---------YAB1          ------>ZmHOX2a(2)         ---------->DOF2 <------MYB83                   <---------ARR11(3)          <---------ANAC46     ----------->GT1      --------->MYB55(2)             --------->ARR11(3)        <---------ARR14(2) --------->ICU4           <---------MYB46(3)            --------->YAB1 --ZmHOX2a(1)--------->REM1(2)<---------WOX13(1)    <------MYB46(1)              <---------YAB1 ================HOX2a_HOX2a--------->ATHB12        ----------->GT1              <---------TOE1(3) ==HOX2a_HOX2a           --------->YAB1            --------->ALFIN1              <---------TOE2(3) ==HOX2a_HOX2a          --------->ICU4     <----------DOF2<-----------GT1  --------->ICU4   atggcaattggatcgtgtagagagcaagaatgatggataaaagagctattagggtggttaaaaccggtttgatgggcatgtttaagataatagtagatgg  15398300                                                                                      --------->DAG2                                                                                     ---------->DOF2                                                                            <---------ANAC46                                                                            <---------ANAC55(1)                                                                            <---------ANAC58                                                                            <---------bZIP60(1)                                                                            --------->O2                                                                            <---------TGA1a                                                                            --------->TGA1a                                                     <---------AHL20(2)     <---------O2                                                   <-----------TBP          ====================bZIP_DOF                                               <------MYB83 ------->MYC3    <---------ANAC58                                <----------ID1 <------MYB46(1)              --------->bZIP60(1)                           ---------->DOF2     ----------->GT1         --------->ALFIN1       <------ZmHOX2a(1)                      ----------->GT1         --------->MYB59--------->ALFIN1        <---------ZAT14               ----------->GT1*TSS            --------->MYB46(2)   <------ZmHOX2a(1) --------->ZAT14 <---------ANAC46   ---------->DOF2    <-----------RAV1(1)  <-------MYC3 --------->ALFIN1   <--------   gtttagtgtgtctcaactagttaaaagtaaaaagaggccaaatgttgtttggtatttatacatgtgtgaggaagagtggcgtgagagtaaagtgaaggat  15398400                     <----------DOF2                     <---------DAG2                                               <---------AHL20(2)                    <---------DAG2                  ---------->DOF2               --------->AHL20(2)              <---------------AtSPL8      --------->ANAC55(2)                  <---------ICU4              <---------------AtSPL3      <---------ANAC55(2)                 <---------YAB1              --------->ALFIN1           <-------TEIL                         --------->ICU4        <              --------------->AtSPL3    --------->ARR14(1)               <---------ANAC46         <--              --------------->AtSPL8    --------->CCA1(2)                <---------ANAC58         ---             <---------ZAT14           --------->ARR14(2)                <---------ANAC55(2) --------             --------->ZAT14           <---------ARR14(2)                --------->ANAC55(2)--------- -TOE2(3)   --------->ALFIN1           <---------GLK1(2)                 <---------ANAC58  ----------   gggcttcgaagacagtgtggtacctttttcttcgtaaatcagatacgttttatctaaagtcatttctgaacaatttcgtgataattaaacaaaaaaagta  15398500                                                                                <---------ICU4                                                                                --------->YAB1                                                                                <--------ATHB1                                                                               <---------ATHB12 --------->ANAC46                                                              <---------ATHB51 -------TEIL                                                                   --------->ICU4 -------ARR14(2)                                                          --------->ANAC46 ------>ARR14(2)                                                          --------->ANAC58 --->GT1                                                         <---------TOE2(3) >DAG2                                             --------->At4g35610    --------->ANAC58 >DOF2 <----------DOF2                    <---------YAB1  <---------ATHB12--------->ANAC55(2)   tatacgtcgctttagaaacttagaaaaactgtggaataagttttctcataggcatcttcaatcgtttaagttagagacgcaataatggaataagatgatg  15398600                                  <---------YAB1                                 --------->ARR11(3)                                 --------->AHL20(1)                                 <---------ARR11(3)                                 <---------AHL20(1)                               ------->TEIL                            <---------YAB1                          --------->YAB1                          <---------ICU4                         --------->ICU4                   --------->ANAC58                   --------->ANAC58                                                    <---------ARR11(3)                 --------->At4g35610                                                   --------->ARR11(3)      <-----------GT1    <---------ATHB51                                  ----------->GT1   aagtatttttacaaatatcagacgacaattatgaatatttttgacttactaagtattgtttttttttggttttgggttagaaaaatcgaaatcttgtttt  15398700                                                   <---------AHL20(2)                                                  <---------AHL20(2)                                                  <---------AHL20(1)                               <-                                              <---------AHL20(2)                                   <-                                   --------->TOE1(3)                                         --------                                   --------->TOE2(3)              <---------ARR11(3)       <---------YAB1                                  ----------->RAV1(2)             --------->ARR11(3) --------->AHL20(2)                                <-----------GT1   --------->AHL20(2)                 --------->AHL20(1)                      <---------AtLEC2---------->DOF2     <----------DOF2<-----------GT1<---------AHL20(2)         --------->MYB52(1)  --------->YAB1   <---------YAB1  ---------->DOF2        <---------AHL20(1)   tttcttagacataacgtctgttttgcaagacttataacctgaaagtttataattttttttcttttaaagacatttttacatatgaaatattttatgattt  15398800  Previous    Next  AGI:  At2g36710.1    Description:  pectinesterase family protein. similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT2G36700.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62971.1); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Pectinesterase, catalytic; (InterPro:IPR000070); contains InterPro domain Pectin lyase fold/virulence factor (InterPro:IPR011050) Range:  from: 15396545    to: 15398330    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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