Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              --------->TOE2(3)            --------->TOE1(3)                               ------->GAMYB         <-----------GT1                                   --------->MYB46(3)     <---------ARR11(3)                                  ----------->RAV1(1)     <---------ARR14(2)           <------NtERF2       --------->ANAC58     <-----------ARR10            --------->At5g28300 --------->ANAC46                         <-----     --------->ARR14(2)          ----------->GT1      --------->ANAC58                     --------->At4g35610     --------->ARR11(3)         <---------DEAR3(1)    --------->RAP2.6(2)     <<<<<<<<<<<<<<<<<LFY    <------ZmHOX2a(1)     <---------REM1(1)        --------->ARR14(2)     --------->DAG2   --------->ZAT2 ----->MYB52(1)        <-----------RAV1(1)        ---------->DOF2        ---------->DOF2  --------->GLK1(2)   aacagaggatattaccttgaagcttatgttgtaggcggtgaatttttctccaaaaaccgcaaccgaaaaactagaaaaagtgccattggaagaagctgtg  15393100                                            --------->AtMYB61                      ------>ZmHOX2a(1)   ----------->RAV1(1)         <---------ATHB12            <---------ANAC58        --------->ANAC58             <---------ANAC46                                       ---------        --------->ANAC46             <---------ANAC58                                  >>>>>>>>>MYB98        --------->ANAC58    --------->ARR14(2)              ---------->ID1  <---------ARR11(3) ----AtMYB61    ------->TEIL<---------ARR14(2)    <---------GLK1(2)         --------->ARR11(3)   gtattgttccactcaatggacgtccttgagtatcccattccttgcaccacaagattgtttttgttctcatgaacaataaatctttccctaacaaaaaaga  15393200                                                       <-----------GT1                                                   --------->AHL20(1)                                                   --------->AHL20(2)                               <                                                   <---------AHL20(2)                     <---------ANAC58                                                  --------->AHL20(2)                      <---------ANAC58                                                  <---------AHL20(2)            <---------TOE2(3)   <                  --------->AHL20(2)         --------->At5g28300                <---------TOE1(3)   <                 --------->AHL20(1)        <---------YAB1                     --------->YAB1   <-----                 <---------ARR11(3)        <---------TOE2(3)               --------->WOX13(1) <------                 <---------AHL20(1)    --------->ARR11(3)            ---------->DOF2    --------->ARR11(3) ->DOF2   --------->ANAC46   ---------->DOF2----------->GT1   --------->ARR14(2)<---------YAB1<------   cactcacattacacatcaaaatatttagaagtaaagaagaagattatggtaaataatttacctatatatgccaaagtcaattaagattaatgtcttgctt  15393300                                                            <---------ANAC58                                                       --------->ATHB12                     <--------      ------>ZmHOX2a(2)                            --------->MYB46(3)                       <-------- ---------ANAC46                                 --------->ANAC46   --------->TOE2(3)    ------>ZmHOX2a(1) ---------ANAC58                               ------>MYB46(1)      --------->TOE1(3)    <----------DOF2 ---------ANAC58                          <-----------GT1   ----------->GT1          <---------ARR14(2) -----DOF2                               <-----------GT1    <---------ANAC46         --------->ARR14(2) ---ANAC58                           <----------DOF2  --------->MYB46(3)         --------->At5g28300 ---ANAC58 <---------ICU4 --------->ARR11(3)   ------>MYB83 <---------ANAC58    ----------->GT1   tggcttgatccaatacttgcatcaatagcatcttggactcttttaaacctcccacaaccattgagtgaaaccttcaataccatggtgaatccttttgttg  15393400                                       ------>ZmHOX2a(1)                                       =============HOX2a_HOX2a                                     ------>ZmHOX2a(2)                                    <------ZmHOX2a(2)                                   <---------ARR14(2)                           =========================HOX2a_HOX2a                           =================HOX2a_HOX2a                           ================HOX2a_HOX2a                         <---------TOE2(3)                    <----------DOF2--------->ARR14(2)                 <---------ALFIN1  ------->TEIL             <-----------HVH21  <---------WOX13(1)                                                 <-            <---------MYB46(3)--------->ATHB12                            ----------->GT1        ---- ---RAV1(1)<---------AtMYB61 <---------YAB1  ------>ZmHOX2a(2)    --------->ICU4                ----- -MYB46(3) --------->ALFIN1<------ZmHOX2a(1) --------->MYB46(3) <---------At4g35610             <----   gaaattttgagaggtggtcacactttgaaggatgatggatcctttgatccaccgattcaattggagagatgatggagagaaacaaaatgaagaatagcat  15393500                        <------ZmHOX2a(2)                       <---------ARR11(3)                                            --------->ZAT6                       --------->ARR11(3) ----------->GT1                   <---------HSFC1(2)           <---------TOE1(3)           --------->GLK1(2)                    --------->HSFC1(2) --------WOX13(1)<---------HSFB2a(2)  <---------GLK1(2)                  ---------->DOF2 ----->ATHB12  <-------TEIL           <---------ARR11(3)               <------ZmHOX2a(2)   --------->HSFC1(2) ---->ICU4 <---------TOE2(3)          --------->ARR11(3)              <-----------ARR10    <---------HSFC1(2) -----YAB1 --------->MYB59           <---------RVE1(1)               <------ZmHOX2a(1)  ---------->DOF2   gattgacatagtttaggttcaagaagatcaaacgagaagagattttgtgaaatgtgaagaagtttgtgagaggatcaaagcttcttaacacaaagcttct  15393600                --------->DAG2                                                         <---------YAB1               ---------->DOF2                   <-----------ARR10                --------->ANAC58           <---------YAB1                        <---------ARR11(3)               --------->ANAC58  -         <---------At4g35610                     --------->ARR14(2)       <---------ZAT6--------->YAB1    <---------HSFB2a(2)                          <---------ARR14(2)    --------->HSFB2a(2)       <---    --------->HSFB2a(2)                          --------->ARR11(3)    <---------------AGL15   ------   <---------LBD16    <---------ANAC46          <---------CCA1(2)      <---------HSFB2a(2) --------->YAB1   taacttggggaagatgataaagttgtgtagaaaatggcaaatgctctagtatatctactctaaatctctcattctagacttagtaagctatgatcacaac  15393700         <---------ICU4       --------->TOE2(3)      <---------ICU4                             <----------DOF2              <----------DOF2      --------->YAB1                            ------>ZmHOX2a(2)   <---------AHL20(2)              - -------->YAB1     ------------>CBF           <---------ARR11(3)    --------->AHL20(2)              < ------ICU4      ----------->HVH21            --------->ARR11(3)   <---------ATHB12              <--- ------>CBF    <----------DOF2         <-------TEIL            ------------>CBF             <--------   aattacaaacattatttctttgacaatgaccctataccaagttcatttgatctttttgactctcatccaattaattctctctttattttttgttttactc  15393800                                      <--------ATHB1                                      --------->YAB1                                     <---------ATHB12 -------->AHL20(2)                   <---------ATHB51                                               x ---------AHL20(2)        --------->ANAC55(2)                                                       x -------DOF2            <---------AHL20(2)                                                          x ---GT1     <-----------GT1      ----------------->AGL3            <---------TOE2(3)         ------>ZmHOX2a(1)   ttttaattcatatgaaacctttctatttaagtattttcaataatagatggttttgtagtttaggcatttaagaaaatttgagactcttaaacatcctaat  15393900             <---------CCA1(2)           <---------AtLEC2       <---------ANAC58       <---------ANAC58       <---------ANAC46      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  <------MYB83   <----------DOF2  <------MYB46(1)<---------DAG2  xxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxxxxx>smallRNA(i2)<----------DOF2 <---------AtMYB61        ------->MYC3            --------------->AGL15                        ------ <---------MYB46(3)       <-------MYC3           <-----------------AGL3                        <----- xxxxxxxxxxxxxxxxxxx>smallRNA(si3)     --------->ZAT6               <---------AHL20(2)         ------ xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   <---------TOE2(3)             <---------YAB1 --------->YAB1   - xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<-----------GT1               <---------AHL20(2)       ---------   gagttggtgtcttgcatagctttttgcacatgatgcttttaacattactcatcttattttggcatctatttttattaactaagaaacataacaacattta  15394000  Previous    Next  AGI:  At2g36700.1    Description:  pectinesterase family protein. similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT2G36710.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62971.1); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Pectinesterase, catalytic; (InterPro:IPR000070); contains InterPro domain Pectin lyase fold/virulence factor (InterPro:IPR011050) Range:  from: 15391785    to: 15393500    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version