Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               --------->ANAC46                             --------->ZAT6                  --------->LBD16                    --------->TOE2(3)            <---------YAB1                 --------->LBD16      --------->YAB1 --------->TOE1(3)            <---------TOE2(3)                 <---------LBD16      --------->TOE1(3)                     --------->AHL20(1)                <---------LBD16       --------->TOE2(3)               --------->ANAC58      ---------       <----------DOF2     <-----------GT1     <---------ICU4         --------->ANAC58      <-------- -------RAV1(1) ----------->RAV1(2)  <<<<<<<<<ARR1  ----------->RAV1(2)     <---------ARR11(3)------- >ZmHOX2a(1)  ------>ZmHOX2a(2)      <<<<<<<<<ARR2 -------->P         --------->ANAC46      ---------   gttgctgttcttttgatcccctggatttttaacacaacaatcttaaaaatacttacctgaaactgttccaatacccaatatactaacattgcaaaatctt  15377500                                         --------->ATHB12                                         -------->HAHB4                                         <---------ICU4                                         --------->YAB1                                        <---------ATHB12                                        --------->ICU4                                        <---------YAB1                                      --------->YAB1                                   ------->GAMYB                                  <----------DOF2                                     <------------MYB.PH3(2)                                 <-----------------AGL3                               <---------MYB111(1)     --------->ZAT2             <-------TEIL                                          <---------MYB111(2)     --------->At4g35610       <---------ARR11(3)                              --------->At4g35610     <---------ZAT2           <---------GLK1(2)                                <---------At4g35610 >ARR11(3)                 <-----------RAV1(2)                            <---------YAB1--------->MYB52(1) -ARR11(3)                <------ZmHOX2a(2)                       <---------DAG2 --------->ANAC46 -->TOE2(3)              <---------AGP1<---------TOE2(3)          --------->TOE1(3)   <---------MYB46(2) >GLK1(2)                --------->ARR11(3)                       --------->TOE2(3)   <---------MYB52(2)   aagacccagcacaacttcatgagcatagatcaggttcttttaatgattacaactaaaatttttgttcaccttaactatgttagcagcaactaactataag  15377600                                      --------->DAG2                                --------->MYB52(1)                              <---------MYB46(2)                              <---------MYB111(1)                              <---------MYB52(2)                                                 ----                         --------->ANAC55(2)                                                  <------                         ----------->GT1         <----------DOF2                             --------                         <---------ANAC55(2)  <---------ARR11(3)                             <-------                         --------->ANAC58     --------->ARR11(3)                           --------->YAB1                         --------->ANAC58    --------->GLK1(1)                            <---------YAB1                     ----------->GT1 ---------->DOF2                                      <------ZmHOX2a(2)   agccatcaatggtatgcataaaacagtaagtaactaacaaaaagcagagttctttaatcccaaacacatagaaattgaaattctccaaaacgatcataat  15377700                               ---------->DOF2                                          <------------                      <---------ZAT2                                                    -------------                      --------->At4g35610                                               --------->HSFB2a(2) ----->YAB1           --------->ZAT2 ----------->GT1                                    <---------HSFB2a(2) ---ICU4              <---------At4g35610                                        <---------TOE2(3) ->ICU4    ------->GAMYB   ----------->GT1              --------->YAB1<-------TEIL     -------------- --YAB1 --------->MYB52(1)<---------TOE2(3)          <---------ICU4 <---------GLK1(2)<-----------GT1   caaaattagataacagcataatcgagctgaggtaaaagagggtaacaaaatcgcataatcacaaaaatcagattcatgaagttgatgttaccagaaattg  15377800                     <------ZmHOX2a(2)                    <-----------HVH21                               ---------->DOF2              --------->MYB46(3)                                  --------->At4g35610          <-----      <---------ANAC46  --------->At4g35610            <---------ANAC58              <---------YAB1     <-------TEIL --------->DEAR3(1)                   <---------ANAC58     --------->MYB46(3) ------ ---AGL15   --------->ARR14(2)                        <---------HSFC1(2)    <---------ATHB12--------- -->AGL15   <---------ARR14(2)                        --------->HSFC1(2)  --------->WOX13(1)<-------- --->AGL3<---------TOE1(2) ---------->DOF2   ---------->DOF2    --------->YAB1  <-----------RAV1(1)   aacatggttcgtagaatccaccgatcagccaaagtgatgcgatttcgaaaagaagaagcttgctaatcagaagagccaatcactgttgttattcagcaga  15377900            --------->ARR14(2)          <------ZmHOX2a(1)       <XXXXXXXXXXXXXXXXXXXXMIR870      ------>ZmHOX2a(2)                                   --------->MYB46(3)  --------->ICU4                                       <---------WRKY38(1)  <---------MYB46(3)     <- ----At4g35610                                         <---------WRKY12   <---------MYB52(1)       -- --->At4g35610           *TSS                   <----------DOF2     <<<<<<<<<TBF1                 --- >At4g35610--------->ARR14(2)                 ---------->ID1  <----------DOF2   --------->ARR11(3)<-- -At4g35610<---------ARR14(2)                <-----------GT1  <---------DAG2--------->MYB52(2)<------   tgaaatgatcgaggaatcggcaaattgtctcaaaatcgtgttttttttttctttttgtcaacgacttttcttcttcgtttgttatcttgctaagttatac  15378000                                          <------NtERF2                                          <---------MYB52(1)                                          --------->ATERF1(1)                                         <---------RAP2.6(3)                                         <---------SPL7                                        <---------ATERF1(2)                                        --------->ATERF1(2)                                        --------->RAP2.3(3)                                    <---------DEAR3(2)                                   --------->ETT(1)                                 <-----------HVH21                                --------->MYB55(2)              --------->ATHB51  <------MYB83              --------->ATHB12  <---------MYB46(3)          --------->ICU4        <------MYB46(1) --------MYB52(1)              --------->ALFIN1 ------->DOF5.7(2)       --------->MYB52(1) ------>TOE2(3)<------------CBF<---------AtMYB61 -----GAMYB  <---------YAB1<---------ANAC46  --------->At4g35610   <-----------GT1                --- -----GT1<----------DOF2----------->HVH21<-----------HVH21 ----------->GT1<----------DOF2 <---------WRKY38(1)   cgttaatgggcctttattattgacccataacgggtggtcgggccgtcagcctaatctatcgtcgtaaatttacttcctttttttttttttgggcaactcg  15378100                                                                                                   <-                                                                                                  <--                                                                                       <------NtERF2-                                                                                ---------->DOF2   <--                                                                                xxxxxxxxxxxxxxxxxxxxx                                                                                xxxxxxxxxxxxxxxxxxxxx                                                                                xxxxxxxxxxxxxxxxxxxxx                                                                                xxxxxxxxxxxxxxxxxxxxx                                                                                <xxxxxxxxxxxxxxxxxxxx                                                                               <xxxxxxxxxxxxxxxxxxxxx                                                                               <xxxxxxxxxxxxxxxxxxxxx                                                                               <xxxxxxxxxxxxxxxxxxxxx                                                                               <xxxxxxxxxxxxxxxxxxxxx                                                                              <xxxxxxxxxxxxxxxxsmallRNA(s)                                                                              <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                              xxxxxxxxxxxxxxxx>smallRNA(i)                                                                        --------->ZAT6 ------>NtERF2<                                                                      <-----------GT1 --------->ANAC58                 <---------AtLEC2               <---------DAG2    <---------AHL20(1)  <xxxxxxxxxxxxxx      <-----------GT1                           <----------DOF2   --------->AHL20(1)  --------->ANAC58 -------->GT1<----------DOF2            --------->AHL20(2)       --------->AHL20(2)  <xxxxxxxxxxxxxxx   tcgtaaatttacatgctttgcataaatgactgaaatgagcaataacataactttttttttttgtcaaatatataacactagataaggcccgcctaaatag  15378200            ------->TEIL            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)         <---------REM1(1)   <---------SPL7  <---------ANAC46  <---------ANAC58  <---------ANAC58 --------DEAR3(1) -------ANAC58 ----->NtERF2 -------ANAC58 xx>smallRNA(s2) x>smallRNA(le3) >smallRNA(le3) x>smallRNA(si3) xsmallRNA(si3) xsmallRNA(fl3) xsmallRNA(si3)                       <---------AHL20(2)  --------->YAB1                        ----- xsmallRNA(le3)                 --------->YAB1         --------->YAB1                           ----- xsmallRNA(s2)       --------->AHL20(2)           --------->YAB1                           <---------YAB1 ------NtERF2        <---------AHL20(2)      <---------YAB1   --------->GLK1(2)         --------->ICU4 xxsmallRNA(s)      --------->ICU4--------->ICU4  ----------->GT1    >>>>>>>>>EIN3   <---------AHL20(2) xsmallRNA(s)   --------->At5g28300   --------->AHL20(2)--------->AHL20(2)           --------->AHL20(2)   gcgggcgtaagatgtaactgtaattttttatcgataatatttaaattttgaatagtaaaataataatctatacattgttcttgatatataattttgaata  15378300                                                                                                <----                                                                                                -----                                                                               <---------ALFIN1 <----                                                                              ------>MYB83     ------                                                                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                               xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                       xxxxxxxxxxxxxxx>smallRNA(se3)<----------DOF2                                                      <---------YAB1     <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                     <---------ARR11(3)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                     --------->ARR11(3)<xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  <----------DOF2                                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)--------->YAB1<xxxxxxxxxxxxxxxx                            <---------YAB1          --------->YAB1  xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                         <---------AHL20(1)        <---------YAB1 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                         <---------AHL20(2)       <---------TOE2(3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                         --------->AHL20(1)      --------->YAB1xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                         --------->AHL20(2)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) <---------DAG2                    <---------AHL20(2)      <---------YAB1    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                    --------->AHL20(2)     --------->TOE2(3)  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) ---->YAB1          <---------AHL20(1)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)------>MYB46(1) <------ ------>GT1      ------->TEIL--------->YAB1--------->YAB1    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<---   gtaaaatagtagttttatgcattttattttattatactcattcaatcttattgatgatatttgaagtctaaatagtaacctacacactttttctttatta  15378400  Previous    Next  AGI:  At2g36680.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G53120.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62968.1); contains InterPro domain Modifier of rudimentary, Modr (InterPro:IPR009851) Range:  from: 15375877    to: 15377925    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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