Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 ------                       <---------ARR14(2)                                                      ------                       --------->ARR14(2)                                                      <-----                       <---------GLK1(2)                                                 --------->LBD16            --------->TOE2(3)                                                           <---------LBD16           --------->YAB1          <-----------HVH21                                    --------->LBD16        ------->GAMYB  --------->ARR11(1)                --------->GLK1(2)             <---------LBD16       <---------MYB52(2)         <----------DOF2   ----------->GT1          ----------->HVH21 ------ --------->ZAT14     ----------->ARR10          ---------->DOF2            ----------->GT1--------->LBD16 ->ICU4--------->MYB46(3)<-------TEIL         <---------ATHB12  ---------->DOF2       <---------LBD16   cagtttacaacaaacatcaaaataagattcgtctccctttcacaacaaatcaaagagaaaatcagtgaaagagaagagagtgacattttcccgggaaaat  15371100                             <---------YAB1               --------->GLK1(2)                                         <---------ARR11(3)     --------->AHL20(2)  <---------GLK1(2)                    --------->ANAC58    ------->GAMYB --->GLK1(2)  <---------ARR14(2)          --------->ZAT18     --------->ANAC58   --------->ANAC46   - ------------------>ANAC81  <-----------GT1                 --------->CCA1(2)  --------->MYB52(1)   - ----ARR14(2) --------->ARR14(2)        --------->ZAT18  <---------YAB1  --------->ARR11(3)         < --->ARR14(2) <---------GLK1(2)--------->WOX13(1)      --------->YAB1   --------->YAB1    ------>ZmHOX2a(1)   cggccaaataaacacagattcttcaccgattatcaatccaagtgtgcaataagcgaagcatgatacgaaaacgaagataatcaacgaaattcctcacaat  15371200            --------->ANAC58            --------->ANAC58                   ----------->HVH21            --------->ANAC46          <---------ARR14(2)          --------->MYB52(1)          --------->ZAT14 -------->TOE1(3)       --------->CCA1(2)  <---------RAP2.6(3)    <---------ANAC58                --- -------->TOE2(3)    <---------TOE2(2)<---------ZAT14             <---------ANAC58                <-- ---------MYB59      <---------TOE1(2)--------->ARR14(2)  ---------->DOF2  --------->MYB52(1)     ---   aacctaaaatccaaacgaaatcgaaggtatggaagaagagtataccgtcttgacgcgagagaaagttagcgtagccataacagagagagcgaccagacga  15371300                                                                       <---------ANAC46                                                                       --------->ANAC58                                                                       --------->ANAC58          <---                                                                      ----------------------->TaNAC69(2)               --------->MYB52(1)         <---------SPL7            ----------->HVH21     -----------            <-----------------------TaNAC69(2)    <---------ANAC46  ----------->TGA1     ----------->HVH21   <----------DOF2                      <------NtERF2  <---------ANAC46<---------ANAC55(2)------>NtERF2 ------>HSFC1(2)                      <---------DEAR3(1)  <---------ARR14(2)   --------->ALFIN1  ---- -------HSFC1(2)            <---------ARR11(3)   <------NtERF2     <-----------HVH21     <---------ETT(1) ------>HSFB2a(1)           --------->ARR11(3)  <-----------HVH21<---------DEAR3(1)      --------->ANAC46   agcgtctttacagagacgaacagaagttaagctcttgaactcggcgaacgcgtcgtagagtataccttcggtgacggaagggtgtaagtctccgacatat  15371400                                                --------->ANAC58       <------NtERF2                            --------->ANAC58       <---------MYB52(1)                    <------NtERF2      <-----------HVH21                      ------>NtERF2      <---------RAP2.6(3)                  --------->RAP2.3(1)      <-----------TGA1                    --------->At4g35610      ------>NtERF2                       --------->LBD16     --------->bZIP60(1)               <---------ATERF1(1)     <---------bZIP60(1)              <---------ARR14(2)     --------->RAP2.6(2)              --------->ARR14(2)     --------->RAP2.3(3)            <---------HSFB2a(1)     --------->DEAR3(1)             <---------HSFC1(2)    <------NtERF2                   --------->HSFC1(2)    --------->RAP2.3(1)             --------->HSFB2a(1)   <---------ATERF1(1)         >>>>>>>>>TBF1 --------->LBD16   ------>NtERF2           --------->LBD16------>NtERF2  --------->ANAC46        --------->LBD16 <---------ATERF1(1)  <---------DEAR3(1)     <---------HSFB2a(2)--------->DEAR3(1)  --------->DEAR3(1)     --------->HSFB2a(2)--------->RAP2.3(2)                   ----------->HVH21 --------GT1           <------ZmHOX2a(2) --------->ANAC46                --------->ICU4    ---------- >RAV1(1)             --------->ARR14(2) ------->GAMYB                <------NtERF2     --------->TOE2(3) ----->MYB52(1)       <---------ARR14(2)--------->MYB46(3)          --------->RAP2.6(2) --------->TOE1(3)   aacgacgccgtcactggagaactcgatcccgaagaagaagcatccgccgcatgtaatgcagcatgaacagtcgccatttttgctctgatacctcaaagga  15371500                                                                                                   <-                                                                                              <------                                                                                             --------                                                                                            <--------                                                                                            <--------                <---------------------WRI1                                                  ---------              <----------ID1                                                --------->ANAC46<--------         --------->ANAC58                                               --------->GLK1(2)   <--------         --------->ANAC58                                              <---------GLK1(2)<-------GAMYB     --------->ANAC58          <xxxxxxxxxxxxxxxxsmallRNA(i)            --------->ARR14(2)<---------MYB52(1)     --------->ANAC58      ---------->DOF2           ---------->DOF2 --------->ANAC58   <---------RAP2.6(3)   ---------->DOF2 ---------->DOF2               ---------->DOF2     --------->ANAC58  <---------MYB46(3) >DOF2--------->ZAT18  ---------->DOF2     ----------->GT1      <---------YAB1      ------------>MYB.PH3(1)   aacacaaacgcactaaacgacgaaagaaagaaagagagagagggagagaaaaaaagaaagaagatgatgacaagaatcgcgaaacaaggccgttacgtta  15371600      ------>ZmHOX2a(1)      --------->LBD16    ----------->RAV1(2)          <---------ANAC46 ------>ZmHOX2a(1)               <---------ANAC58 --------ZAT18           <---------MYB52(1)            <---------ANAC58          --------->ANAC55(2) ---MYB52(1)           <---------ANAC46                <---------ANAC58      <----------DOF2 ->TOE2(3)             <---------ANAC58           <---------ANAC58          --------->TOE2(3) -ANAC58               <---------ANAC58           <---------ANAC46       --------->ARR14(2) -ANAC55(2)         <-----------GT1               <---------ANAC58      <---------MYB52(1) >ANAC55(2)      <---------YAB1  <---------ANAC58<------NtERF2        <---------ANAC58 -ANAC46         <---------AHL20(2)            <---------DEAR3(1)     <---------ANAC58 -ANAC58   <----------DOF2--------->ZAT14   <-----------RAV1(1)       <---------ANAC46         <-----   gtcctctcctgagctttatattattccgttcagtagcgtttttgttctggtggcgtttcgtcgcgactcgtgccgtttcctttacatgattttgttttgg  15371700                   --------->GLK1(2)                                               --------->ANAC58                   --------->ARR14(2)                                              --------->ANAC46                   <---------ARR11(3)                                              --------->ANAC58             --------->ANAC58                                               <---------AHL20(2)             --------->ANAC58                            <-----------GT1    --------->AHL20(2)    --- ----LBD16 ---------->DOF2       <-----------GT1        <-----------GT1    --------->AHL20(2)    <---   gggacatttttgtaaaagcaaaatctgaaattttgttacatttcggagtaagacagtattacccttatatgctactattaaattcacgcccattttagtt  15371800                                                                              <----------DOF2                                  ---------->DOF2        --------->YAB1      <---------ANAC58     <--      ------->MYC3          <---------AHL20(2)     --------->TOE2(3)         <---------ANAC58    <---      <-------MYC3      --------------->AGL15    --------->GLK1(2)     --------->ATHB12        ------ ------>YAB1            <---------------AGL15   <---------GLK1(2)     --------->ICU4      <---------ANAC58 ----TEIL            <-----------GT1          ----------->ARR10     --------->YAB1        <---------ANAC58   tcataaaacgtgttatagagaattatctattttaagtaaagttttggatagattcttaattgtaatgctaaaatgatttgctttggtaattgtcgtttca  15371900                                       --------->TOE2(3)                                       --------->YAB1      <---------ANAC58              <-----------GT1                                      --------->ZAT6      <---------ANAC58            <---------MYB52(2)                       --------->ANAC46  <-------      --------->RAP2.6(3) --------->ANAC46                          <---------ZAT6      --------->ZAT18  --------->YAB1  <---------YAB1 --------->ANAC58                   ----------->GT1     --------->ZAT14 -------ICU4    --------->YAB1   --------->ANAC58               ------>ZmHOX2a(2)       <---------ZAT18 ------YAB1    <---------YAB1    --------->ANAC46             --------->AGP1 --------->ZAT18 -------- --->YAB1     --------->AHL20(2) --------->ANAC55(1)   --------->YAB1    ---------->DOF2<---------ZAT14   tcattcatgcctgcaatattatagttataggccacaagtaaccatattccttcacaatgagactgatctacagttaaaaggcactactactacactactc  15372000  Previous    Next  AGI:  At2g36660.1    Description:  PAB7 (POLY(A) BINDING PROTEIN 7); RNA binding / translation initiation factor. Identical to Probable polyadenylate-binding protein At2g36660 [Arabidopsis Thaliana] (GB:Q9ZQA8); similar to PAB8 (POLY(A) BINDING PROTEIN 8), RNA binding / translation initiation factor [Arabidopsis thaliana] (TAIR:AT1G49760.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62958.1); contains InterPro domain Polyadenylate binding protein, human types 1, 2, 3, 4; (InterPro:IPR006515); contains InterPro domain RNA recognition motif, RNP-1; (InterPro:IPR000504); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contain Range:  from: 15368400    to: 15371477    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g36670.1    Description:  aspartyl protease family protein. similar to aspartyl protease family protein [Arabidopsis thaliana] (TAIR:AT5G22850.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62959.1); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007); contains InterPro domain Peptidase A1; (InterPro:IPR001461) Range:  from: 15371867    to: 15375237    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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