Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  <---------AHL20(2)                                --------->AHL20(2)                          ------>ZmHOX2a(1)                                                         -                         --------->TOE1(3)             --------->ANAC58                      <-------                         --------->TOE2(3)             --------->ANAC58                    --------->ATHB12                    <----------DOF2 <-----------GT1--------->ZAT6                         <---------ATHB12   aaactaaattgtcatgttatgtcttttccttagattaatttccctatgccctaacacaagacaagagaatgtagttttccaaatactttccactgattga  15339100          --------->YAB1       <----------DOF2                           --------->MYB52(1)         <-------TEIL       <---------YAB1                  ---------->ID1             ----------->GT1 ------>TEIL               --------->KAN4(2)     --------->ARR14(2)     <---------ATHB12          --- --WOX13(1)            ----------->GT1           <---------ARR14(2)    <---------MYB52(2)     <------   tgaaccctagattcatattttctaatggttattctttcttaagacatagcagatttagttttgtcccatcgccaataacgaaactcaaatagttatatta  15339200                                                                                                <----         <---------AHL20(2)                                                                 ---------         <---------YAB1                                                              <---------GLK1(2)         --------->AHL20(2)                                           <------NtERF2 <---------At4g35610     <---------ANAC55(2)                                      --------->WRKY12    <-----------RAV1(2)     --------->ANAC55(2)                <-----------GT1     --------->YAB1        --------->HSFB2a(2)   <-----------GT1<---------YAB1 ---------->DOF2       ------>ZmHOX2a(1)          <---------HSFB2a(2) ------>YAB1      <---------AHL20(2)  <----------DOF2 --------->TOE2(3)<---------ANAC46  ----------->GT1 ---AHL20(2)<---------YAB1      --------->AtMYB61------>ZmHOX2a(1)  <---------DEAR3(1)--------->GLK1(2)   tcgtattacatattattagttttattgtaagagaccaaagctttacctctcctcttcctcaacgatgacctcggcgtaaatgtcccagatgctgtgataa  15339300                                                                                   <---------At4g35610                                                                                 --------->ATERF1(1)                                                                                 <---------RAP2.6(2)                                                                             --------->At4g35610                                                                             <------MYB83                                                                             <---------At4g35610                                                                             <---------ATERF1(1)                                                                            <---------DEAR3(1)                   --------->ANAC55(2)                                      <-----------RAV1(1)                --------->ARR14(2)                                          <---------MYB46(3)              <---------YAB1                                               <---------ANAC58              --------->ANAC46                                             <---------ANAC46              --------->ANAC58                                     --------->AtMYB61            --------->YAB1                                         --------->DEAR3(1)         --------->YAB1                               ----------->HVH21    <---------ANAC58         <---------ICU4                               --------->WRKY12   <---------MYB46(3)        <---------YAB1                              <-------GAMYB --------->MYB46(3)    <----------DOF2<---------ANAC55(2)             <---------ANAC46<---------ALFIN1------>NtERF2    <---------DAG2<-------TEIL                     <---------MYB46(3) --------->DEAR3(1) ------>MYB46(1)<---------ARR14(2)         <---------ZAT2         <---------MYB55(2) ------>MYB83 --------->ANAC58             --------->ZAT2       --------->ANAC46 <------NtERF2 -------GT1 <-----------GT1   <----------DOF2     <------NtERF2 <---------ALFIN1------>NtERF2 >YAB1--------->YAB1       ------>NtERF2  ------>ZmHOX2a(1)  --------->ANAC46<------MYB46(1)       --   acctccctttataatcacgatacgtcttcggcctttctctcttcctgctcgcgtcgttgacaccctccaccaccgtggctggtgccgcttcggcagtctt  15339400                                                                 --------->RAP2.3(1)                                                             <------MYB83                                                             <------MYB46(1)                                                             --------->At4g35610                                                             <---------At4g35610                                                            <---------MYB46(3)                                                            <---------DEAR3(1)                                                            <-----------RAV1(1)                                                           <---------ANAC58                                                           <---------ANAC46                                                           <---------ANAC58                                                    <---------ZAT14    --------->ANAC46                                                    --------->ZAT14------>NtERF2                                                   <---------ALFIN1<---------RAP2.6(3)                                                   ----------->RAV1(1) --------->ANAC58                                      ----------->HVH21   ----------------------->TaNAC69(2)                                      --------->WRKY12   <---------MYB46(3)               --------->CCA1(2)    <-------GAMYB --------->MYB46(3)   --------->ANAC58           ---        --------->DAG2             <---------ANAC46--------->AtMYB61  --------->SPL7        ---------      ---------->DOF2     <---------ANAC58        --------->ANAC46 <---------At4g35610    ---------->DOF2    --------->LBD16   <-------GAMYB<---------MYB46(3)    --------->MYB55(2)             --------->LBD16  <---------LBD16    <---------DEAR3(1)         --------->ANAC46 <------NtERF2        ---------------  ----------------->AGL1  <---------ANAC58   --------->ANAC46<---------ATERF1(1)      <---------LBD16 --------->HVH21 --------->ALFIN1 <------NtERF2 <---------ALFIN1------>NtERF2      ----------->HVH21   ggtgaccggaaagggagagatgggcgttgagttcgcgtcgttgacaccctccaccacagtggctggtgccgctacggcagtcttggtgaccggaaaggga  15339500             <---------ANAC58             <---------ANAC58         <-------GAMYB        <---------ANAC58          --------->ICU4        <---------DEAR3(1)        <---------ATHB12 ------>ALFIN1  <---------------------WRI1                                  ------------>CBF >DAG2  <---------ANAC46    --------->ANAC58                               --------->ANAC58         < -->AGL1<---------ANAC58    --------->ANAC58        ------>ZmHOX2a(2)      --------->ANAC58   <------   gtgatgcagggcgttgagttcgacattgacaaggaaatgatgctctcgttttgatccagatagagactggaaatgagaggcaatacgagagaagtagagg  15339600                                        <--------HAHB4                                        <---------ICU4                                        --------->YAB1                                        --------->ATHB12                                       --------->ICU4                                  <---------ANAC55(2)                                              --                                  --------->ANAC55(2)                                              <-                                  --------->ANAC58                                             ------                                  --------->ANAC55(1)                                         <------                                  --------->ANAC46           <---------ANAC46             <---------MYB52(1)                                  --------->ANAC58          --------->ATHB12         <-----------GT1                                 <---------LBD16      <---------TOE2(3)          <----------DOF2  ---                         <-----------GT1--------->ATHB51 <------------CBF   <----------DOF2--------->ARR14(2) ---------ZAT6       ----------------------->TaNAC69(2) <------ZmHOX2a(1) <------------------------ANAC81 ---ZAT6   <---------AHL20(2) <-----------HVH21       <---------TOE1(3)<----------DOF2<---------At5g28300   tagagtttgtgattttatgaagtctttttactggtcacggaataattaggggaattaaggattgtttggaaaacttttcttttctttttaccgtttccta  15339700                                       --------->AHL20(1)                                 <---------AHL20(2)                                 --------->AHL20(2)                              --------->AHL20(1)                   --------->AHL20(2)  <---------AHL20(2)                   <---------AHL20(2)  <---------AHL20(1)    <-----------RAV1(1)      --------->AHL20(2) ------->AHL20(2) <---------ATHB12--------->AHL20(2)  <---------At5g28300 --------AHL20(2) --------->AHL20(2)   --------->AHL20(2)                <---------ANAC46 >ZmHOX2a(1)    <---------------AGL15 --------->AHL20(2)         ------->TEIL     <-------TEIL ---MYB59     ------------>CBF<---------AHL20(1)     <-----------GT1<-----------RAV1(1)   --------->AHL20(2) ------>AHL20(2)--------------->AGL15 <---------AHL20(2)     ------->TEIL<---------------------WRI1 -   attaatatgtggctgtcccaattaatagaaaatatataaattaaattttgaagtttcactgtgtatgtatatgttgtctgtacatacagagataatataa  15339800                                                                                     ---------->DOF2                                                                                  --------->YAB1                                                                               --------->YAB1                                                                           ----------->GT1                                                                        --------->CCA1(2)                                                                       --------->ARR11(1)           -                                                <----------DOF2        <---------ARR14(2)     <------ ---------->GT1<---------RVE1(1)             <-----------GT1           --------->ARR11(3)     <------   gaaggtaaacaaaatcgatattttgtctatctatgtaaaatttagtttttcttttctgtagatgttatctatagatatggataataagaaagaaaacttt  15339900                                                                                                   <-           <---------AHL20(2)                                                                    ----          <---------AHL20(2)                                                       <-----------GT1<--      <---------YAB1                    <---------GLK1(2)                          --------->MYB52(1)      --------->AHL20(2)              ----------->ARR10                            <---------DOF5.7(2)      <---------AHL20(2)---------->DOF2 <---------ARR11(3)    <---------YAB1     --------->DOF5.7(2) -------->AHL20(2)    <---------AHL20(2)--------->ARR11(3) <---------YAB1  --------->MYB46(3) ------- ---DAG2  --------->AHL20(2)--------->ARR11(3)         <---------DAG2    <<<<<<<<<GT-1----------->GT1 ----DOF2 <---------AHL20(1)<---------ARR11(3)         <----------DOF2   <-----------GT1  --------->AHL20(2)   ttttatatataattaatttcatattaaaaagaacttagtttagattttcgcttaaaactttatgattctagttattaaccattgttaacggtttaaatac  15340000  Previous    Next  AGI:  At2g36560.1    Description:  DNA-binding protein-related. similar to DNA-binding family protein [Arabidopsis thaliana] (TAIR:AT4G12080.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15984.1); contains InterPro domain Protein of unknown function DUF296 (InterPro:IPR005175) Range:  from: 15336222    to: 15339526    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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