Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          --------->O2        <---------O2                 <---------YAB1        =====================================bZIP_DOF        --------->TGA1a       <---------GLK1(1)        <---------TGA1a       --------->GLK1(1) --------->RAV1(2)          <------ZmHOX2a(1) --------At4g35610    <---------AHL20(2) ---GLK1(2)          --------->AHL20(2)                          <---------WRKY12                <--- ->At4g35610       --------------->AGL15            --------->AHL20(2)                          ----- --At4g35610   --------->GLK1(1)  <----------DOF2   --------->YAB1                          ---------   cttctgagccaagtgagatttcatttaataggatttcttttgattttaaaacaataaaaacaactggtaaacgagaaatagaagttgattcagtttaaat  15334200                                                               <---------ICU4                                                              <---------YAB1                                                            --------->YAB1                                                           <-------TEIL   <------ZmHOX2a(1)                           --------->TOE1(3)           <------ZmHOX2a(1) ------AHL20(2)             <-----------RAV1(1)--------->TOE2(3)          ----------->GT1 ---->AHL20(2)          <---------YAB1         <----------DOF2--------->ICU4           <----------DOF2 >AHL20(2)         <---------ICU4   <-------TEIL --------->AHL20(2)       <----------ID1   ----------   ttataggattttagtctttcaacatttctattgttggattcatcaaaaactttaaatgagattcattattcatatgaggaaaaaatcaactttcaaagcg  15334300               <-----------ARR10                              <----------DOF2               --------->ARR14(2)                         ---------->ID1               <---------ARR11(3)                       <------MYB83               <---------ARR14(2)                     <---------WOX13(1)      <---------------AtSPL8         <-----------RAV1(2)<------MYB46(1)       --------->MYB52(1)      --------->ARR11(3)          ----------->HVH21  <------------CBF       <---------YAB1  ---------->DOF2        <-----------GT1            --------->ATHB12   --------->WOX13(1)    -------- >DOF2<---------------AtSPL3 <---------TOE1(2)     <---------YAB1    ------------>CBF<----------DOF2   atggaaaagatgtacagtatctacattttcccatgtatgacaggtggaattatctgattggtcccttttaagtcaattactaatggtctttgtctctgac  15334400                                                        --------------->AtSPL8                    ----------->GT1                     <---------------AtSPL8               --------                  ----------->GT1                    --------->YAB1                  ---------->DOF2                 --------->DAG2   --------->ATHB12 <---------TOE2(3)             --------->ARR14(2)                ---------->DOF2   <---------ICU4  ---------->DOF2     --------->ARR11(3)    ---------         --------->MYB52(1)  <---------ARR11(3)  --------->AHL20(2)   <---------ARR11(3)   --------->RAP2.3(1)         ----------->RAV1(1) --------->ARR11(3)  <---------AHL20(2)   <---------GLK1(2)---------->DOF2 --->HVH21  ------->GAMYB---------->DOF2    ------------>CBF      ---------->DOF2<---------ARR14(2)--   tctcttcgaatcaacagaaaaagtgaaaaaagatagtcattagaaaaacaattaaagataagtacaaaaaaagattttgtgagtatccaaagagccgcat  15334500                              <---------ANAC46                    <---------ANAC58                    <---------ANAC58       --------->TOE2(3)    ------>ZmHOX2a(2)              --------->TOE1(3)      <---------ANAC55(2) --------->ARR11(3)               --------->TOE2(3)       --------->ARR14(2)      ----------->GT1<----------DOF2                    <---------ALFIN1          ----------->TBP ->LBD16     <---------AHL20(2)                        --------->MYB46(3)  ------>ZmHOX2a(1) >RAP2.3(2)  --------->AHL20(2)                    <-----------TGA1    --------->ARR14(2)------->TEIL --------->GT1<---------AHL20(2)                   <-----------HVH21   <---------ARR14(2)----------->RAV1(1)   gaagaaaaacgtaaattaaatggcttttgatctcgtgaagctaaatcgccattcgtcaccaccttaatgactaaatcctctactatatatgcaccatatg  15334600                                                                           --------->ANAC58      <---                                                                           --------->ANAC46      ----                                                               ------>NtERF2                  -------                                                              <---------ALFIN1               --------                                                              --------->ANAC46               <-------                                                             --------->LBD16           ------->TEIL                            --------->At4g35610    <---------ICU4          --------->ANAC58--------->YAB1                            <---------At4g35610    --------->ATHB12        <----------ID1 <---------YAB1               --------->YAB1    ---------->DOF2  <---------YAB1<------NtERF2   --------->ANAC58-----  ------>ZmHOX2a(1)------------>CBF     --------->YAB1      <---------ATERF1(1) --------->ANAC58<----   agtccttactgtcttaagcataacaatggcagaagaaaagaataagaagagcatcattgctcccgcgcccgacttatacgacaaggatgaatatgatgat  15334700                    --------->LBD16      --------->TGA1a      <---------O2 <---------HSFB2a(2)      --------->ANAC55(2)      <---------TGA1a      --------->O2 <-----------RAV1(2) ------ICU4        --------->HSFB2a(2)                                              <---------GLK1(2) ----->ATHB12    <------ZmHOX2a(2)                                                --------->ANAC58 -->YAB1        --------->ARR11(3)                                                --------->ANAC58 ->ICU4         <---------ARR14(2)                                                --------->ANAC46 --YAB1 ----------->HVH21                                                     <------ZmHOX2a(1) ---->ICU4      --------->AGP1<---------ZAT14         --------->TOE2(3)      <----------ID1 -----YAB1      --------->ARR14(2)        <---------GLK1(2)                <------ZmHOX2a(1)   gattactcatgtgacacagatccagaagagacagaactgagttggattcttgataaacttagtttagtaccgaagaaggaggacaagaaactcttggtct  15334800                                                                                          <----------                                                                                          <---------ARR11(1)                                                                                          <---------ARR11(3)                                                                                          --------->ARR14(2)                                                                                          --------->ARR11(3)                                                                      ------>ZmHOX2a(1)   <---------ARR14(2)                                                                    ----------->RAV1(2)  ------>MYB83                                                                <---------MYB52(1)       ------>MYB46(1)                                                           <---------ARR14(2)            <---------ARR14(1)                                                           --------->ARR14(2)            <---------CCA1(2)                                                         --------->ANAC58              <---------MYB59                    --------->REM1(1)                    --------->ANAC58          --------->ZAT18                   <---------ZAT14          --------->YAB1--------->MYB46(3)      --------->ALFIN1   taagtctgaatggtctacttctacaccgattgcatataaaaaataagcgtaatgctcccaagaaccgttctcctgatgcttcatgtggaccaaatcttgg  15334900                                                  <---------WOX13(1)                                      --------->AHL20(2)                                      <---------AHL20(2)                                      <---------YAB1 <---------ANAC58                                  --------->AHL20(2) <---------ANAC58                               <----------DOF2  --------->ATHB12      <---------ANAC46                     <---------AHL20(2)      <---------ANAC58   ---------->ID1 -ARR10  --------->YAB1  <---------ICU4      <---------ANAC58 <-----------RAV1(1)        --------->At4g35610   taacatttcaatagtagttttatttattcatttcttttatataattagcttgattgggtttgttttgttgtttagtgtataagaggccatttgctgaaga  15335000                                                                              <--------ATHB1                                                   <---------ANAC58           --------->ATHB51                                                   <---------ANAC46           <---------ICU4                                               <---------ANAC58               --------->AHL20(2)                                      <------MYB83 <---------ANAC58           --------->YAB1                                      <------MYB46(1)                        <---------ATHB12                                     --------->MYB59                <---------AHL20(2)                               <------MYB46(1) <---------ANAC58    --------->AHL20(2)                               <------MYB83   --------->ZAT2       <---------AHL20(2)                             <--------P    ------>ZmHOX2a(1)      <---------WOX13(1)          ------>ZmHOX2a(1)                      --------->GLK1(2)    <---------At4g35610 <---------YAB1<---------ATHB51 =======   gtttatgaagttttgtctagagagattccaagttggtatttggtcctctgcttgcgagttagtctctgattaattttcaataatttcaatctcttcctct  15335100  Previous    Next  AGI:  At2g36550.1    Description:  similar to NLI interacting factor (NIF) family protein [Arabidopsis thaliana] (TAIR:AT2G36540.1); similar to unknown [Populus trichocarpa] (GB:ABK92897.1); contains InterPro domain NLI interacting factor (InterPro:IPR004274) Range:  from: 15334626    to: 15335881    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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