Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                <---------------AGL15              ------>ZmHOX2a(1) --------ARR14(2)               <----------DOF2 ------->ARR14(2)   --------->YAB1                       --------->YAB1 -----AtLEC2  --------------->AGL15                --------->YAB1   ---------->DOF2                --   ataacctctgtgtttcctacattgagaatcacatctttctcagtccaactcaaacagaatcaaaatttgacaaagcgatttcatttctcatgagaccaga  15321000                    <------MYB83                    <------MYB46(1)                                         --------->ARR14(2)                   <---------TOE1(2)                                        <---------ARR14(2)                  <--------P                                               --------->GLK1(1)              <---------ANAC58                           <---------ZAT6    <---------GLK1(1)              <---------ANAC58            --------->GLK1(2)            --------->ANAC58   --------->ANAC55(2)   <---------ARR14(2)                     --------->ARR14(2)  <---------STY1(2) --------->LBD16   --------->ARR14(2)                     <---------ARR14(2)  --------->At4g35610  ---------->DOF2 ------->YAB1 <---------ANAC46  ----------->HVH21      <---------ANAC46--------->ANAC58   <---------ANAC55(2)   atcaaaatcccctcttacttgtaggtattggagtctgaccagagaatatgagggatgcagtgttagctagagcaagcaaatccccaaaagacaagtgatc  15321100                                    --------->ANAC58                                    --------->ANAC58                <---------ICU4                                  <---------AtLEC2                  --------->ZAT6                       --------->MYB46(3)                 --------->WOX13(1)         <---------ARR14(2)     ------>ZmHOX2a(1)     <-----------GT1         --------->ARR14(2)   ----------->RAV1(2)  <---------ANAC55(2)        <---------CCA1(2) <---------ARR14(2)       --------->ANAC55(2)        --------->GLK1(1) --------->ARR14(2)   --------->TOE2(3)   <---------ATHB12      --------->YAB1 =====================RAV  <---------MYB59   --------->ANAC46           ---------     <---------ATHB12----------->RAV1(1)     <---------ARR11(3) --------->MYB46(3)          <--------   aagaccactcatatccttgttcccaacaaatctcctgcatgcatcaataccttacttaaccaattacccatcactactctttgaaatttctcaactttag  15321200                                                                               <---------ANAC58                                                                   ------>ZmHOX2a(2)                                                --------->MYB46(3) ==================================                                               ------>ZmHOX2a(1)  <------ZmHOX2a(2)                                               ==========================HOX2a_HOX2a                                               ===========================HOX2a_HOX2a                                             ------>ZmHOX2a(2)    ===================================      <----------ID1                 <---------ARR11(3)          --------->ARR14(2)           <------    --------->DAG2                  --------->YAB1  <---------ANAC46----------->GT1   <---------ANAC58   ---------->DOF2  ================================HOX2a_HOX2a----------->ARR10<----------DOF2  ---- >TOE2(3)           ------>ZmHOX2a(1)--------->ARR11(3)--------->REM1(2)       <---------ANAC58 <---- --DOF2       <---------DAG2       <---------YAB1<---------ALFIN1<---------ARR14(2)   <---------ANAC58   aacaaaaaagcacaaacctttcctccaattgactgctatgatattgatcctccaccgtgtatgggcagatcggtgaaaatggcttcatgggtgtctgagg  15321300          --------->MYB111(2)          <---------MYB46(3)         <--------P        <-------GAMYB       <---------MYB46(3)      <---------TOE2(3)<----------DOF2 ==HOX2a_HOX2a    <---------ZAT2 ==HOX2a_HOX2a    --------->At4g35610                                   --------->ZAT14 ---TOE2(3)<-------GAMYB                                          <----------DOF2       --------->YAB1 ----->GLK1(1)    <---------At4g35610     <-----------GT1         <---------DAG2  --------------->AGL15 --ZmHOX2a(1)  ---------->DOF2     ------>ZmHOX2a(1)           <-----------GT1    <---------------AGL15   aatccatggaggttgttgaaagctgctttcttctctcctctgtttctccatttctgactctatttttacttttcttcactcttacttaaatcagaaccat  15321400                                               <--------ATHB1                                               --------->AHL20(2)           <---------AHL20(2)                                               <---------ICU4              <---------AHL20(1)                <----------DOF2                --------->YAB1              <---------AHL20(2)       <               <---------HSFB2a(1)            <---------ATHB51     <------ZmHOX2a(2)           <-----               --------->HSFC1(2)             <---------ATHB12    --------->ARR11(3)      <---------YAB1               <---------HSFC1(2)     --------->DAG2        ---------->DOF2--------->AHL20(2) -------               --------->HSFB2a(1)   ---------->DOF2  ------------>CBF------------>CBF  <-----------GT1     --------->DAG2            --------->ANAC46--------->ATHB51   <---------ARR11(3)    --------->YAB1    ---------->DOF2       <-----------GT1 ------------>CBF --------->AHL20(2)        <---------ICU4--   ttgagaaaaagcttggaactttctattttttccactgcaaaaagttcaataatttcttcaataaaagagatcaccaattttttttaaaaatcacgatttt  15321500                                                         <------------CBF                                                        --------->ATHB12                                                  --------->LBD16                                                 --------->HSFB2a(2)                                                 <---------HSFB2a(2)          <------NtERF2                <----------DOF2                  --------->ANAC46            ------>NtERF2           <------ZmHOX2a(2)                    <---------LBD16              ----------->RAV1(1)          --------->ARR14(2)                  ------>ZmHOX2a(2)             --------->ETT(2)          <---------ARR14(2)                 <------ZmHOX2a(2)              <---------ETT(2)          --------->AGP1                     --------->GLK1(1)              --------->bZIP60(1)          --------->ARR11(3)                 <---------GLK1(1)              <---------bZIP60(1)         --------->At4g35610                --------->ARR11(3)           --------->ALFIN1        ----------->ARR10                   --------->ARR14(3)         --------->ALFIN1    --------->YAB1                          <---------ARR14(2)         <---------ANAC58             <   --------->ICU4                           --------->ARR14(2)         <---------ANAC58            <- ---------AHL20(2)      --------->LBD16     <---------ARR11(3)     <---------ANAC58               --- ----AHL20(2)   <---------DAG2             <---------GLK1(1)       <---------ANAC46               <-- -->AHL20(2) <---------ALFIN1       ---------->DOF2<---------MYB52(1) <---------MYB46(3)         ---- ------->AHL20(2)     <---------LBD16      --------->GLK1(1)       <---------ANAC58             <----   ataaaatgatcagatccacttttttctggggttttagagaaagagagatctccggaagtcattgattttgggtgagtggcgacatgaacgattaatccgt  15321600       ---------->DOF2     ----------->HVH21   --------->At4g35610   <------MYB83   <------MYB46(1)   <---------ANAC55(2)   <---------ANAC46  --------->MYB46(2)  --------->MYB111(1)  --------->MYB111(2)  --------->MYB55(2)  --------->MYB59  <---------MYB46(3)  --------->MYB52(2)                                                                           <----- <---------MYB55(1)                                                                           ------- ---------MYB52(1)                                                                         <---------AtMYB61 ------GAMYB                                       ----------->GT1                         <---------YAB1 ------>MYB52(2)                               ----------->GT1                        --------->YAB1 -------MYB46(3)                              --------->DAG2       <---------ICU4    <---------ATHB12 ----->SPL7               <-------TEIL       ---------->DOF2      <-------TEIL    --------->ATHB12 -----MYB52(1)   <----------DOF2     ----------->GT1     <----------ID1  --------->ZAT6    <---------   tcgttaggtgaaagagagactttttagattcacaacaaaatgtaaaaaaaagtaagaaaaaaacaaaattcattaccagtagaatcaatggttatggtgg  15321700                   --------->MYB55(2)                   <---------MYB46(3)                  --------->ALFIN1                  <---------AtMYB61                <------MYB46(1)                <------MYB83                <---------ANAC46               --------->MYB46(2)       <------ZmHOX2a(2)        ------------>MYB.PH3(2)        --------->ARR11(3)       <---------ZAT6<--------P        <---------ARR11(3) ----MYB46(3)  <---------DEAR3(1)<------ZmHOX2a(1)                                               ---- -->ALFIN1 --------->MYB52(2)    ==============HOX2a_HOX2a                          ----------->GT1 --RAV1(1) --------->MYB59 <---------YAB1             <---------MYB52(1)        ---------->DOF2 -----   tgatggagagagttagttcggtggtagctatgagaggataagatcactgatgcttcgtttcttctcttggaatcgatgaagttaaagagtaatatagaaa  15321800                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                   <-                                       <-----------RAV1(1)                                 <---------HSFC1(2)                             <---------ARR14(2)                                            --------->HSFB2a(1)                             --------->ARR14(2)<---------ANAC46           <---------MYB46(3)     <---                            <------ZmHOX2a(1)  <---------ANAC58         <---------MYB52(1) <---------HSFB2a(1)          <---------MYB59  ----------->GT1<---------MYB46(3)       --------->MYB52(1)      --------->HSFC1(2) <----------DOF2   ---------->DOF2    <-------MYC3                 <-----------GT1       ---------->DOF2 ----->DAG2   <---------ANAC46        ------->MYC3    <-----------GT1<------------MYB.PH3(1)  <------ ----->DOF2 --------->MYB52(1)--------->CCA1(2)<---------ANAC58 --------->YAB1         xxxxxxxxxxxxxx   aagcttttttggcctaacgtataaagaagaggatataacatgtgttgttgtgtgtttcactatttttcataaccgtttgtttatgtagggcgaaagttcg  15321900  Previous    Next  AGI:  At2g36490.1    Description:  DML1/ROS1 (REPRESSOR OF SILENCING1); DNA N-glycosylase/ DNA-(apurinic or apyrimidinic site) lyase/ protein binding. Identical to Protein ROS1 (ROS1) [Arabidopsis Thaliana] (GB:Q9SJQ6;GB:Q7Y1X6); similar to DME (DEMETER) [Arabidopsis thaliana] (TAIR:AT5G04560.2); similar to DML2 (DEMETER-LIKE 2), 4 iron, 4 sulfur cluster binding / catalytic/ endonuclease [Arabidopsis thaliana] (TAIR:AT3G10010.1); similar to DME (DEMETER) [Arabidopsis thaliana] (TAIR:AT5G04560.1); similar to repressor of silencing 1 [Nicotiana tabacum] (GB:BAF52855.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46558.1); similar to unnamed protein product [Viti Range:  from: 15315100    to: 15321351    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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