Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            <---------ANAC58                                                                          <---------RAP2.3(3)                                                                          <---------RRTF1(3)                                                                          <---------RAP2.3(2)                                                                          <---------ANAC58                                                                 <------NtERF2                                                                 <----------CDC5                             <---------ARR11(3)                 --------->At4g35610                             <---------GLK1(2)                  <---------At4g35610                      <----------DOF2                          <---------DEAR3(1)                   ------>NtERF2                              <---------PCF2                 --------->ATERF1(1)                          --------->ZAT18                 --------->DEAR4(2)                         <---------DEAR3(1)   <---------ZAT2                 <------NtERF2                              <---------RAP2.3(3)  --------->ZAT2                <---------At4g35610                         <---------MYB46(3)   --------->At4g35610       <---------At4g35610--------->HSFB2a(2)              <---------ANAC46      <---------At4g35610   ------>NtERF2--------->At4g35610                        --------->ALFIN1 <---------At4g35610     - -------->SPL7  <---------DEAR4(2)                       <---------ANAC46 <---------RRTF1(2)      --- ---------HVH21 <---------ATERF1(1)                     <-----------RAV1(1)<---------RAP2.3(1) ------ ----->ANAC46  <---------DEAR3(1)     --------->ARR14(2)--------->ALFIN1  <---------RAP2.6(2) ------- ->P   --------->At4g35610<---------HSFB2a(2)         <-----------RAV1(1)<---------LBD16      <------   cgtcccgactgctgaaggcgctgcctttctagatacttgggattcacatggatgctatgtggtgggcgctgagattgcggctcagctctggctgtggata  15313000           --------->MYB46(3)     --------->At4g35610     <---------At4g35610  <---------At4g35610  <---------ZAT2                                                 --------->LBD16  --------->At4g35610                                           <---------ANAC58  --------->ZAT2                                                <---------ANAC58             -------- -------->MYB46(3)                                 --------->At4g35610                    <---------HSFB2a(2) -------->RAV1(1)                       <----------DOF2         <---------ANAC46          --------->HSFB2a(2) --->CCA1(2)                ---------->DOF2        <---------At4g35610              --------->LBD16 -->ARR14(2)      <----------DOF2    <---------ARR11(3)        <---------LBD16      <---------TOE1(2) ---ARR14(2)      <---------DAG2     --------->ARR11(3)   --------->ALFIN1     <----------DOF2   caacagctgctgaaccatcacttttagcattaaagccaagttctttctcaataagctgaagtgtttgcggatgaaagactcctttccaggttccaaaaag  15313100                                          --------->TOE1(3)                                       --------->ANAC58                                 <---------ANAC46                                 <---------ANAC58  ------>NtERF2                  <---------ANAC58                   ---------->DOF2  --------->LBD16         <---------WRKY12--------->TOE2(3)    ----------->GT1                    <-- <---------ANAC46         <---------WRKY38(1)         --------->TOE1(3)                          ---- -->DOF2            <------ZmHOX2a(1)  --------->ANAC58<-----------HVH21                 ------->TEIL   atgccgcatgttagaatgcataggagggtcaacttgcctgtaagccttaacaaaaaccttcagagaagtaaaaagagggtgatcagagatgaatttgcta  15313200                                            <-----------RAV1(2)                                          --------->TOE2(3)                                       ------>MYB83----------->RAV1(2)                                       ------>MYB46(1)                                     <---------MYB52(2)                                     <---------MYB111(2)                                     <---------MYB55(2)                                     <---------MYB46(2)                                     --------->AtMYB61      ---------->DOF2                                     --------->MYB46(3)   --------->ANAC58                                     <---------MYB111(1)  --------->ANAC58                                    --------->ANAC58      <------NtERF2                 --------->YAB1     --------->ANAC58     ------>NtERF2<---------TOE2(3) ----ZmHOX2a(1)  <---------ICU4   <----------ID1  <---------ZAT2  <---------ANAC55(2) ------->GT1  --------->YAB1  ---------->DOF2     <------NtERF2   --------->ANAC55(2)   ggaaaaaaacattctataaccatgactatcaacaaagcaccaaacctcaggcagcctggcaccaaagtacttaatgtaatcccttccgatgttcttcaca  15313300                          <---------GLK1(2)                         --------->HSFC1(2)                         --------->HSFB2a(1)                         <---------HSFB2a(1)                         <---------ZAT2                         <------NtERF2                         <---------HSFC1(2)                 --------->ALFIN1             --------->ZAT14             <---------ZAT14             <-------TEIL--------->At4g35610       --------->ARR11(3)         <---------------AtSPL8                    <---------ARR11(3)             ---------->DOF2----     ----------->HVH21   <---------At4g35610   <---------AtLEC2   --------->At4g35610  ------------>CBF   atgctgtctaacaggtacagtgttggcagcttctgatcacttggtacctgcatgatattcttcaaatcagataacccagaagaaaaaaggccaatttgat  15313400                                --------------->AGL15           --------->DAG2                                <---------------AGL15          ---------->DOF2                               <-----------------AG          --------------->AGL15                               ==============================================MADS_MADS                   <---------GLK1(1)                 <---------ATHB12      ---------->DOF2                   --------->GLK1(1)          ---------->DOF2<---------------AGL15      ----------->GT1         ------->TEIL  <---------YAB1<---------ARR11(3)      --------->DEAR3(1)- -->ZmHOX2a(2)    <---------ARR11(3)---------->DOF2  ------------>CBF    --------->YAB1             -   ctcatagagagtaacatcgagatttccacatgagcctctaaaggtaatgaaagaaatcaataacttaaagtagaatcaaaagcacagaccaagatgacat  15313500                                                                                           <---------ANAC58                                                                                         --------->ICU4                                                                                     ------------>CBF                                                                                    --------->YAB1                                <---------GLK1(1)                              --------->ZAT14      --------->ZAT6            --------->GLK1(1)                              ------------>CBF   --- -------->ANAC58  --------->GLK1(2)   ------------>CBF                         <---------ZAT14    <-- -------->ANAC58 <---------GLK1(2)   ----------->RAV1(1)                   <---------ALFIN1<---------ANAC58   tcaagctaatactaacacatattctgacaactagaaatccaacaatagacacagataaccattagacgatgtaaacaacactgcaatagcaattcttgtc  15313600                                                <---------ANAC58                                                <---------ANAC58        --------->ANAC46                    <---------ANAC58        <---------ALFIN1            <------------CBF       <---------REM1(2)        ------>ZmHOX2a(1)                                   <----------DOF2      <---------ALFIN1  <-----------RAV1(2) <---------ANAC58                  <---------ANAC58     <---------REM1(2) ================HOX2a_HOX2a                            <---------ANAC58 ------>ZAT14          <------ZmHOX2a(2)<---------ANAC58              ---------->DOF2 <---------ANAC46 -------ZAT14      <---------WOX13(1)   <---------ANAC58  ---------->DOF2  --------->WRKY12   ttcactctccacacagacttgatggatcaggctccttctattgagtgcttccttgctacccaaagactgaataaaagttgacttggctttgtggagagca  15313700                 ------>NtERF2                 ----------->RAV1(1)                 --------->MYB52(1)             --------->RAP2.6(2)             ------->GAMYB             --------->DEAR3(1)             --------->ANAC46            --------->DEAR3(2)        --------->YAB1            --------->MYB46(3)  --------->TOE1(3)          --------->ARR14(2)    --------->TOE2(3)          <---------ARR14(2)  ------>MYB83                                         <-------TEIL         <---------ARR14(2)   ------>MYB46(1)                                     --------->CCA1(2)     <---------At4g35610      -------->P              ---------->DOF2     --------->DAG2     --------->At4g35610 --------->GLK1(2)          <---------YAB1       ---------->DOF2 --------->At5g28300------->GAMYB     --------->AHL20(2)              ----------->GT1   tgcggtaagcagaaaccgccaacagaaaatccaacctcaataaaaacagagcttatgaaagcccttgctaaatggtaaagtgagatacaaaaaactctaa  15313800                                                      <---------At4g35610                                                --------->ICU4                                     <-                         <-----------GT1      <---------ANAC55(2)                                  <-             <---------REM1(2)                --------->ANAC55(2)                                  <-             <---------ZAT14                --------->YAB1                                         <-             --------->ZAT14           --------->ZAT14--------->At4g35610                     -------    ---------->DOF2 --------->YAB1 --------------->AtSPL8                        ------->TEIL <------   cgctgataaagagactacacactcatataaccaaaactcagtacaatcacatgatgagctgatatatgcattcttgatatatgaacatgaacaaaatggt  15313900  Previous    Next  AGI:  At2g36480.1    Description:  zinc finger (C2H2-type) family protein. similar to pre-mRNA cleavage complex-related [Arabidopsis thaliana] (TAIR:AT4G04885.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15965.1); contains InterPro domain ENTH/VHS (InterPro:IPR008942); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087); contains InterPro domain Regulation of nuclear pre-mRNA protein (InterPro:IPR006569) Range:  from: 15309883    to: 15313353    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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