Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   --------->ALFIN1                                                                               <---------ANAC46                                                                               <---------bZIP60(2)                                                                               --------->TGA1a                              --------->DAG2                                   <---------TGA1a                       <---------ANAC58                     <---------ANAC46   --------->O2                       <---------ANAC58                     <---------ANAC58   <---------O2                       <---------ANAC46                     <---------ANAC58----------->HVH21              ---------->DOF2---------->DOF2          --------->GLK1(2)  <------ZmHOX2a(1)        --- <----------DOF2     <---------ANAC46                <---------GLK1(2) --------->MYB59    --------->TOE1(2)   ggtctttggagggagagaaagttttgtgtggaaaaggagcaaaatgaagtttagagattctgtcttgggagattaggaacgacgtggaagaacataagac  15307700                  --------->LBD16                                                      --------->ANAC58                 <---------LBD16                                                       <---------ANAC55(2)                <---------LBD16                                                        --------->ANAC58              <-----------GT1                                                          --------->ANAC55(2)         <---------CCA1(1)                                                            <---------LBD16         <---------RVE1(1)                                                        <---------------AtSPL3        <---------ARR11(3)                                                     <---------AHL20(2)        <---------GLK1(2)        ---------->DOF2       --------->AHL20(1)   ------->TEIL        --------->ARR11(3)     --------->ARR11(3)     --------->YAB1 <----------DOF2  --------->SPL7       <---------RVE1(1)   ---------->DOF2            --------->AHL20(2) --------->ANAC55(2) -------->HVH21<---------At5g28300              ----------->GT1      <---------DAG2 <---------SPL7   atgacagagagattttttaccgggaaactaaaagataaagaaacttggtggagaaataatattagttagggctttatgtattttttggtacggaagttgc  15307800                                                 <---------GLK1(1)                                                 --------->CCA1(2)                                                --------->ARR14(2)                                           <-------GAMYB                                         <---------ANAC58                                         <---------ANAC58                  --------->ARR11(3)   <----                                         <---------ANAC46                  <---------ARR11(3)   <----                                     ------>ZmHOX2a(1)          ------>NtERF2             --------->At4g35610             ---------->DOF2  <----------DOF2   <---------ARR14(2)  --------->O2          <---------At4g35610   agagaagaaatggaagaaagtgatgaattcttctttgtccttggcgtttggatatgtgtttcattcggccatgtgaagatgtctctcttctcttctgact  15307900                                                                                          <---------AHL20(2)                                                                                       --------->TOE2(3)                                                                                      --------->ATHB12                                                                                      <---------ICU4                                                                                      --------->YAB1                                                                                      <--------HAHB4                                                                                     --------->ICU4                             <------MYB46(1)                                         <---------ATHB12                             <------MYB83                                          --------->WOX13(1)                    <---------AHL20(2)                                          <---------ARR14(2)       <---------ANAC58     <---------AtMYB61                                   ------->TEIL       <---------ANAC58    <---------WOX13(1)                                   --------->ARR14(2)       <---------ANAC46  --------->ATHB12      <-----------GT1         --------->AHL20(2)--------->AHL20(2) -----DAG2         --------->AHL20(2)   <---------AHL20(2)             <---------AHL20(2)<---------AHL20(2) ------DOF2        --------->YAB1       <---------YAB1        ----------->GT1   --------->GLK1(2)   ttttgagtttcgtctggtctattatatggattggtgtttttttttattgttactcttgttgaaaatgtaaaatttaaatacgaatccatcattaaatgta  15308000                                                                      --------->MYB52(2)                                 --------->CCA1(2)           <-----------GT1                       <----------ID1                     --------------->AtSPL8                     <---------DOF5.7(2)              <---------CCA1(1)              --------->TOE2(3)                     --------->MYB52(1)               <---------RVE1(1)<---------ANAC46            <-                  --------->At4g35610                <---------ARR11(3)<---------ANAC58      ------->TEIL                  <---------At4g35610   <---------ARR14(2)<---------------AtSPL8 --------->YAB1   <--            --------->ICU4      --------->ARR14(2)   --------->ARR11(3)<---------ANAC58   <---------YAB1          ---------->DOF2       <---------ARR14(2)  <<<<<<<<<RAP2.2  *TSS     <XXXXXXXXXXXXXXXXXXXXMIR868   agttagatgtggaaaagatgagctaacgacaagagatttgcagaaatgaaatttagatattttgtaccatgttccttgcattatcaacatttatgaattt  15308100                               <---------At4g35610                           <----------DOF2                       <----------DOF2                    <---------ARR11(3)             ------------>CBF          --------->HSFB2a(2)                    --------->ARR11(3)     <---------ANAC58                  <---------HSFB2a(2) ----------GT1     <---------CCA1(2)       <---------ANAC58     <---------TOE2(3)     <---------ANAC46 ---------GT1      <---------GLK1(1) ------------>CBF         <---------AHL20(2)   --------->ICU4   <   taaactcttctcttccccttgatatctttcttttgctgatacaatgcttgatagtcaattttgtttaatgtgaaactatctagaaatgatgtgtttttaa  15308200                    <---------ICU4         --------->ATHB51        <---------YAB1                  <---------ICU4          --------->ZAT14        <---------AHL20(2)             --------->AHL20(1)      <---------DAG2     <---------AHL20(2)                <---------AHL20(1)      <----------DOF2    --------->AHL20(2)        ------>ZmHOX2a(2)            <---------ZAT18------->TEIL -------TEIL     --------->YAB1       --------->YAB1 <-------GAMYB     --------->ANAC55(2)          <   aattcattttataattgaatcatatttatcgatcggccaaaaatattacttagacagttagaccactttacttatgtatcaacaatttagttttcgataa  15308300                                                                      --------->DOF5.7(2)                                                                     <-------GAMYB                                                                --------->DAG2                                                       --------->KAN4(2)                                                      --------->HSFB2a(1)                                                      --------->HSFC1(2)<---------DOF5.7(2)                                                      <---------HSFC1(2)---------->DOF2                                           ------->GAMYB   <---------YAB1                                         --------->At4g35610--------->YAB1                         <-    <---------TOE2(3)                --------->TOE2(3)<---------HSFB2a(1)                         ---    <---------TOE1(3)               --------->YAB1----------->GT1   ----------->GT1<----------DOF2--- -----------HVH21        ---------->DOF2<xxxxxxxxxxxxxxxxsmallRNA(i)<---------MYB46(3)            ---   catgtcaaggtttatgagtttcgaactcaaagtctcaaacatcaactgcaagtggaaaattctcataaggtcgttaaagaactgtctttataaaaaaccc  15308400                                            ---------->DOF2                                      <----------ID1                                      ----------->GT1                <---------AHL20(2)                               <---------------AGL15              ------->TEIL --------->MYB52(1)            --------------->AGL15           <---------ANAC55(2) --------MYB52(2)             ----------------->AGL3           --------->ANAC55(2)               <--- ------>ANAC46                ----------------->AGL2        <---------MYB52(1)                   ---- ------>ANAC58                ----------------->AGL1   <----------DOF2                      <-------- ------>ANAC58      <----------DOF2 ---------->DOF2  <----------DOF2 --------->AHL20(2)<----------DOF2   aaggaacggacattagatagctctttcaattgtccaaaaaaagaaaaaaagatggctctttcgttatgtatttaaatgaattgccactgcttctacgatt  15308500            <---------ZAT6           <---------YAB1         <---------ICU4     --------->AHL20(2)     <---------AHL20(2)   --------->TOE2(3)                                   <-----------RAV1(1)  <---------ICU4                                   --------->AHL20(1)                         <------  --------->YAB1                                   <---------AHL20(1)                        <-------  --------->ATHB12                                 --------->ARR11(3)                      <---------WRKY18(1) --------->ICU4                                  --------->AHL20(1)                       --------->WRKY45 <---------ATHB12                                <---------AHL20(1)                       --------->WRKY12 ------AHL20(2)  <---------YAB1              <---------AHL20(2)                           --------->WRKY38(1) ----->AHL20(2)<-----------GT1  --------->AtLEC2--------->AHL20(2)            --------->AHL20(2)  <-- -YAB1  --------->ICU4 --------->YAB1       --------->AHL20(2)             ------->TEIL  --------->DOF5.7(2)   aaaatcattaattagtattactataacataattcatggaaacaagattaaatatatattgttgcaaacaaacaaatgaacttaaataatacgttgacctg  15308600  Previous    Next  AGI:  At2g36470.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G27770.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15960.1); contains InterPro domain Protein of unknown function DUF868, plant (InterPro:IPR008586) Range:  from: 15306441    to: 15308069    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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