Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          <---------TOE2(3)                 ----------------->AGL3                 <-----------------AGL3                 <-----------------AGL2                 ===================================================MADS_MADS                <------ZmHOX2a(2)               --------->ARR14(2)            <---------HSFB2a(2)                                                    --------->DAG2            --------->HSFB2a(2)                                 --------->CCA1(2) ---------->DOF2           <---------LBD16                           <----------DOF2  <---------ANAC58<--------------         <---------ARR14(2)                         <---------DAG2    <---------ANAC58---------------         --------->ARR14(2)                         --------------->AGL15    ----------->GT1        <---------GLK1(1)                           <---------------AGL15   <---------ZAT6      <---- ------->HSFC1(2)<-----------------AGL1            ================================================== --------HSFC1(2)------>ZmHOX2a(2)                 <-----------------AGL3 <---------ANAC46--------->ZAT18 --------HSFB2a(1)      <---------TOE1(3)          ----------------->AGL3 <---------ANAC58--------->ZAT14 ---ZmHOX2a(1) <---------ARR14(2)    ----------->RAV1(1)<---------ANAC46  <---------ANAC58<---------ZAT14 -----RAV1(2)--------->LBD16    <---------ANAC46   ----------------->AGL1--------->ATHB12 <---------ZAT18   gagtttcgacatttccggatccgtttaaggcatgttgtgcaacaaaacgaggtaccttttgtggagatagaagcttgagtggtaaaaagttgtacactct  15240200                      <----------DOF2                   --------------->AGL15                  <-----------------AGL3                  <-----------------AGL2                <---------YAB1                                   <---------MYB52(1)       ------>ZmHOX2a(2)                                  <---------ANAC58                <---------At5g28300 -AtSPL8      <---------ICU4                              <---------ANAC46               <-----------GT1 >AtSPL8     <---------ATHB12       <-------TEIL          <---------ANAC58          ------>ZmHOX2a(1) ------DOF2 <---------ARR11(3)    --------->YAB1       <---------DEAR3(1)     <<<<<<<<<TBF1 ===================================MADS_MADS      <---------TOE2(3) <-----------GT1=================   ttgcgatgatccaaaatcattcttcttttgggacaatgttcatatcagtgatcaaggatggcgttctgttttttctcttcttcttcctgattcacagttt  15240300                          <-----------GT1                      --------->YAB1                      <--------ATHB1              <---------YAB1                      <---------ICU4            <---------ICU4                     <---------ATHB51          --------->ICU4                     <---------ATHB12          <---------YAB1                     --------->ICU4          --------->YAB1                                       ---          <------ZmHOX2a(2)           --------->YAB1                                    <-----------GT1         <---------ARR11(3)          <---------ATHB12           --------->YAB1     <---------GLK1(2) ================HOX2a_HOX2a        <---------TOE2(3)<---------YAB1              --------->ICU4   ---   taaatcaactagatcaatatgcaataattctccattctaatgatatatgatgattatcaattgtcttcataacaatgcatacaaagattatttcaatacc  15240400            <--------HAHB4            -------->HAHB4            --------->ATHB51            <---------ICU4            --------->ATHB12            --------->YAB1            <---------AHL20(2)            -------->ATHB1           <---------ATHB51           <---------YAB1         --------->ATHB51         <---------ICU4         <--------HAHB4         --------->YAB1         -------->HAHB4         <--------ATHB1        <---------YAB1        --------->AHL20(2)        --------->ICU4        <---------ATHB51      --------->YAB1                                                           <-------TEIL     <---------AHL20(2)                                            ---------->DOF2 --------->AHL20(2)                                    ---------->DOF2      <---------ANAC58 --->MYB83 --------->ICU4           <---------ZAT6  ----------->RAV1(1)     <---------ANAC58 --->MYB46(1)            --------->GLK1(2)    --------->MYB52(1) <---------ATHB12    ----------->GT1   cacttaaataataattattagctagagactctagtctagagtcaaaaccaagggccacaaagaacaaatcaaagttttaggtgcgaattgtcaaaactaa  15240500                ---------->DOF2              --------->ANAC58                         --------->AtLEC2              --------->ANAC46                     --------->ARR11(3)                              <-              --------->ANAC58                     --------->GLK1(2)                           <-----     <---------PCF2                               <---------GLK1(2)            <---------GLK1(2)   <-  --------->ALFIN1                            ---------->DOF2      <----------DOF2      ---------->DOF2   aatagtggggcattatacgaaagaaccaagaatacagggagaagtagacaaagaatcttgcaaagtcttctttctgtgtttgattctcatcaaagacttc  15240600                                                                                                    <                                                                                                    -                                                  <-------GAMYB------>ZmHOX2a(1)                    -         <-----------RAV1(1)                     <---------ANAC46      <---------ANAC58             < *TSS  <----------DOF2                           <---------ANAC58      ----------->GT1              < --------DAG2                      ------>ZmHOX2a(1)          --------->TOE1(3)                     - ----ZAT14 ---------->ID1         --------->TOE2(3)           --------->TOE2(3)<---------TOE2(3)  --- ---------DOF2 <----------DOF2--------->KAN4(2)  <---------ANAC58      <---------ANAC58       <------   acttttgttctttgtcgcttcaattcaacgcttattcctaaattcgattttgcgttgtcaaattccttaaatttcgttacaaaggtttgatatttccgat  15240700         ---------->DOF2      --------->ANAC58      --------->ANAC58  ------>ZmHOX2a(2) <---------GLK1(1)                                                     <---------GLK1(2) --------->GLK1(1)                                                     <---------ARR14(2) <------ZmHOX2a(2)                                                 <---------MYB52(1) ---------ARR14(2)           <-----------GT1                  <---------ALFIN1 -------->ARR11(3)         <-----------HVH21                  --------->AtMYB61 -------->ARR14(2)        --------->bZIP60(1)              <---------ALFIN1 ---------ARR11(3)    <------NtERF2                  --------->GLK1(1) --------->ARR14(2) ---------ARR14(3)   ------>NtERF2                   <---------GLK1(1)<---------At4g35610    <------- -------->ARR14(3)   <---------RAP2.6(3)        --------->LBD16   <-----------HVH21         <-------- -------->ARR10     <---------ANAC46           --------->ANAC46  --------->ANAC46           <-------- ---At4g35610     ------>NtERF2               <---------LBD16 --------->DEAR3(1)       --------->YAB1   gagatctccagcaaagacgatgccgtcgatgtcaccttcttcagtttccacggagaaatctccacctccgtcagatacttcaatggctatagtagctttc  15240800                                        <---------GLK1(2)                                     <---------ALFIN1                                     ----------->RAV1(1)                                    <------NtERF2                                   --------->ABI4(1)                                   <---------ATERF1(1)                                   ------>NtERF2                                  --------->RRTF1(2)                                  --------->RRTF1(3)                                  --------->RAP2.6(2)                                  --------->ATERF1(2)                                  --------->ANAC46                                  --------->DEAR3(1)                                  --------->RAP2.3(2)                                  --------->DREB2C(2)                                  --------->RAP2.3(3)                                  <---------ATERF1(2)                                 --------->ORA47(2)                                 --------->ERF1                                              --------    --------->ZAT18              --------->RAP2.3(1)                                ----------->GT1 ---DOF2                        <---------ATERF1(1) --------->KAN4(2)              --------->DAG2 -ANAC58      XXXXXXXXXXXXXXXXXXXX>MIR847          <---------ICU4                 ---------->DOF2 -ANAC58 --------->ZAT14       --------->DEAR3(1) <---------YAB1           <---------HSFB2a(1)   gataactccactactcacttctcttcttctccatcgccgccacattctcttgatcattccagtgaatcggagaaggaagatgcgaaaagtaaacccgaga  15240900                           <---------TOE2(3)                     --------->DAG2                   ---------->DOF2                --------->LBD16                               --------->YAB1                ------>ZmHOX2a(1)                          --------->YAB1                <---------HSFB2a(2)                        <---------ICU4                --------->DEAR3(2)                --------->HSFB2a(2)                     --------->YAB1                 <---------ARR14(2)               <---------LBD16                         <-------TEIL                    --------->ARR14(2)            <---------ARR14(2)<---------ARR14(2)    <---------MYB46(3)               <---------MYB46(3)            --------->GLK1(2)<------ZmHOX2a(1)     <---------AtMYB61                --------->ALFIN1 ->LBD16    --------->ARR14(2)--------->ARR14(2)<---------AtMYB61            ---------->DOF2     ----   gtagaagaaacaagaatcctggaaaggttgaggaaactccatctccgattgtggtggttcataatcacaatcgctctgtgaaagaagtggttccgacgag  15241000                                              --------->At4g35610                                              <---------At4g35610                                         ------>ZmHOX2a(2)                  --------->HSFB2a(2)   <------ZmHOX2a(2)                  <---------HSFB2a(2)  --------->ARR14(2)             <---------MYB46(3)        --------->ARR11(3)                             --------->ALFIN1             <------MYB83              <---------ARR14(2)                          --------->ALFIN1           <--------P                 ------->GAMYB                        <------ZmHOX2a(1)        <     <---------ANAC58                --------->MYB46(3)              <---------ARR11(3)   ---------->DOF2     <---------ANAC58              --------->MYB52(1)    <----------DOF2<---------HSFB2a(2)         -   --------->ALFIN1               <---------WRKY12   <---------RAP2.6(2)--------->HSFB2a(2)--------->DAG2 ------>DOF2 <------MYB46(1)      <---------WRKY38(1)<---------ANAC46--------->ARR11(3)----------->GT1   aaagagtgcgagagttggttctgggagaagtagtggccaacgatctggagctgtttcggctattttgagaaggtctaggagagaagaggtggtaaagttt  15241100  Previous    Next  AGI:  At2g36325.1    Description:  hydrolase, acting on ester bonds. similar to GDSL-motif lipase/hydrolase family protein [Arabidopsis thaliana] (TAIR:AT5G03610.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15945.1); contains InterPro domain Lipase, GDSL; (InterPro:IPR001087); contains InterPro domain Esterase, SGNH hydrolase-type (InterPro:IPR013830) Range:  from: 15238472    to: 15240360    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g36330.1    Description:  Identical to UPF0497 membrane protein At2g36330 [Arabidopsis Thaliana] (GB:Q84WP5;GB:Q9SJM5); similar to integral membrane protein, putative [Arabidopsis thaliana] (TAIR:AT5G62820.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64343.1); contains InterPro domain Protein of unknown function DUF588 (InterPro:IPR006702) Range:  from: 15240601    to: 15242532    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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