Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   ----                                                                                                 ----                                                                                               <-----                                                                                              -------                                                                                              <------                                                                                             --------                                                                   <---------At4g35610       --------                                                                   --------->At4g35610  --------->MYB46(3)                                                          ---------->DOF2          --------->ANAC55(2)                                                        <----------DOF2       <---------ICU4 --------                                                       <---------ANAC46    --------->YAB1    --------                                                       <---------ANAC58   <---------ATHB12 ------>MYB46(1)                                                       <---------ANAC58  --------->ANAC58  ------>MYB83                                                 <---------ZAT2   <---------ATERF1(1)----------->HVH21                        --------->ANAC58         --------->At4g35610     --------->ANAC46--------->AtMYB61                        --------->ANAC58         <---------At4g35610     --------->ANAC58<---------ALFIN1 ----->HVH21        <------ZmHOX2a(1)            --------->ZAT2<---------ARR14(2)  <---------ANAC55(2) ->O2            <---------LBD16           --------->At4g35610 --------->ARR14(2)<-----------GT1-----   acattcaactaaacacataccaggataagcatgtaatgctccaatagctgcagcttggcttaaagggtctgctccaagcattatcacatgaccacccgta  15202200        <----------DOF2                                                                             - ----->ANAC58                                                                        --------->ANAC46 ----->ANAC58                                                                        --------->ANAC58 ----MYB52(1)                                                                        --------->ANAC58 -->LBD16                                                                       <----------DOF2     < -----HVH21                                                                   ======================= ->ANAC58                                                                     ------>ZmHOX2a(1)  ---- ->ANAC55(1)                     <---------At4g35610                          ======================= ->ANAC58         <----------DOF2--------->LBD16        --------->ANAC55(2)------>MYB46(1)     ------ ->ANAC46--------------->AtSPL8<---------LBD16          <---------ANAC55(2)------>MYB83   --------->ANAC58 ---->SPL7     <---------ARR11(3)--------->At4g35610   <-------TEIL     --------->MYB46(3)--------->ANAC58   agcccatcttctttgtacatctttgcatactcttccgcagacttatccgattcaaaattcgtaacgagaactgaaccatcctctttcaagtcacgaagtg  15202300                                                                                  ------->GAMYB                                                                                 --------->MYB46(3)                                                                               --------->MYB52(1)                                                                            --------->ANAC58                                                                            --------->ANAC58  ------>ZmHOX2a(2)                                                         --------->ANAC46 <------ZmHOX2a(2)                                      <-------TEIL     --------->ZAT18 -------->ARR14(2)                                     <------ZmHOX2a(2) <---------ZAT18 ---------ARR14(2)                                    --------->AGP1   --------->ANAC46      -------- ========HOX2a_HOX2a  ---------->ID1                  <---------ARR11(3) <---------ZAT14     <------- ----->ALFIN1      <---------DAG2     <---------bZIP60(1)             <---------At5g28300    <------- =======HOX2a_HOX2a<----------DOF2    --------->ANAC46--------->ARR11(3) --------->ZAT14     -------- --->ALFIN1     <-----------GT1       --------->bZIP60(1)            <-----------GT1        <------ZmHOX2a(1)   tggatccaactatctgtttcacttttccctatcgaaaatcacatcacacagagatagatccataaatgaattcactgcactcaacagccagtgaggattt  15202400                                             --------->ANAC58                                             --------->ANAC58             --------->TOE1(2)                                            --------->SPL7              ------->TEIL                                          --------->DEAR3(1)       <---------At4g35610                                          ----------->HVH21        --------->At4g35610                                         --------->ANAC58          --------->ZAT2    ----------->GT1        <---------YAB1--------->ANAC58     --------->CCA1(2) ->ARR11(3)            <---------DAG2    --------->ANAC46    --------->ARR14(2) --ARR11(3)            --------->TOE2(3)<---------LBD16      <---------ARR14(2)                  <--- --ARR14(2)         <---------CCA1(2)   ------->TEIL     <---------At4g35610               --------->GLK1(2) ->ARR14(2)  --------->ATHB12 ------->TEIL<---------SPL7 --------->At4g35610     <---------MYB46(3)   tctaatcggtgaaattgatttcataccttatgaatatcgatgcacggacggaattgaacagcagatatgagctgaaccctcgatggtttagagactctga  15202500                                --------->HSFB2a(2)                                <---------HSFC1(1)                                <---------HSFB2a(2)                              ----------->RAV1(2)                     <---------ZAT2                           <<<<<<<<<TBF1                      --------->ATHB12                         <-----------------AGL3               --------->ATHB51<---------ARR11(3)                <---------ZAT14 --------->HSFC1(1)           <---------YAB1   --------->ARR11(3) <---------ANAC58     <---------GLK1(2)                  <---------ANAC46 ---------->DOF2 <---------ANAC58   <---------YAB1                 --------->ATHB12   --------->At4g35610 ------At4g35610--------->ZAT18<---------LBD16  --------->AtMYB61     <---------At4g35610   gatgcttgatgaacagagagctctgattcttcttctggaaccaagtgagaccaccattggagtataattgggagctcaaagttctcatctttggaactga  15202600                         --------->ARR14(2)                         --------->GLK1(2)                         ------->TEIL                         <---------ARR14(2)                        <---------CCA1(2)                      <---------ANAC55(1)                      <---------ANAC46                      --------->ANAC55(2)                      <---------ANAC55(2)                      <---------ANAC58                                         <---------YAB1                      <---------O2--------->HSFC1(1)  --------->CCA1(2)  ----------->GT1                      <---------ANAC58  --------->GLK1(2)             <---------MYB52(1)                   ----------->TGA1  <---------ARR11(3)           <---------LBD16                 *TSS <---------bZIP60(2)             <---------GLK1(1)  <------MYB83              ----------->RAV1(1) --------->HSFB2a(2)<---------ARR11(3) <---------AtMYB61     -------           --------->ANAC58       <---------HSFB2a(2)--------->ARR11(3) --------->MYB59<---------GLK1(1)           --------->ANAC58       >>>>>>>ZML2       <<<<<<<<<RAP2.2 --------->LBD16    --------->GLK1(1)      <---------ICU4 ----------->STF1--------->ARR11(3)        --------->KAN4(2) <------------CBF     --------->ICU4----------->HVH21 --------->ARR14(2)--------->MYB52(1)<------MYB46(1)  -----------   aactgtaatcagtaagcaccagtgacgtatctggttctagatattctagggtttagatatcggtttattccggtttggtttaaaattggaaatcgataaa  15202700                                                                                                   --                                                                                                  ---                                                                                                  ---                                                                                                  <--                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                                                -----                                                                                                -----                                                                                                <----                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               ------                                                                                              ------>NtERF2                 <-------TEIL                                         --------->O2            <------    ----------->RAV1(1)                                               <---------O2            <------    <---------ALFIN1                                           <---------YAB1                 ------- -->YAB1   <-----------GT1      *TSS                        --------->DOF5.7(2)         --------->At4g35610 >GT1  --------->TOE2(3)   --------->MYB52(1)              --------->TOE2(3)---------->DOF2 <--------   aatgcccaacatttatcgattcgtttgacaaacagagagtgatgcgatggaacaagaagaacgttatcagtctcgtctcaaagtctcatcatcttccggc  15202800        <---------ALFIN1     --------->ANAC46     <---------ANAC55(2)     --------->ANAC55(2)     --------->bZIP60(1)     --------->ANAC58                                          ================HOX2a_HOX2a     --------->ANAC58                                         <------ZmHOX2a(2)     <---------bZIP60(1)                                     <---------ARR14(3)  --------->ARR14(2)                                         --------->ARR14(2)  <---------ARR14(2)                                         <---------ARR11(3) ------->DEAR3(1)                                            <---------ARR14(2) ------>RAP2.3(1)                                            --------->ARR14(3) ------>ATERF1(1)                                            --------->ARR11(3) ----NtERF2                                                 <---------GLK1(1) -->NtERF2  <-----------HVH21                            --------->LBD16 ------RAP2.3(1)                                        <---------ANAC46 ------ATERF1(1)                                ---------->DOF2------>ZmHOX2a(2) ---->RAP2.3(2)                           ===========================HOX2a_HOX2a ---->DEAR3(1)                            ------>ZmHOX2a(1) --------->GLK1(1) -----DEAR3(1)                       ------>MYB83  --------->HSFB2a(1) --->RAP2.3(1)   --------->TOE2(2)   ------>MYB46(1)    --------->HSFB2a(2)  <---------ALFIN1 --->ERF1 <------NtERF2     <---------MYB59    --------->AtMYB61           ----------->RAV1(1) --->RRTF1(1)    --------->TOE1(2)<---------ANAC55(2)   <---------HSFB2a(2)------>NtERF2 --->ATERF1(1)  ----------->RAV1(2)<---------MYB111(1) <---------LBD16    --------->ANAC46 --->RAP2.6(1)  <---------ANAC55(2)<---------MYB59 --------->HSFC1(2)     ----------->HVH21 ---ATERF1(1)<---------MYB52(1)--------->ARR14(2)  <---------HSFC1(2)     <---------ETT(1) ---RAP2.3(1)--------->DOF5.7(2)  --------->ANAC55(2) --------->MYB52(1)------>ZmHOX2a(1) -->LBD16------>NtERF2   <-----------GT1  ============================HOX2a_HOX2a -LBD16 --------->DEAR3(1)<---------At5g28300 --------->ANAC46=================HOX2a_HOX2a   gccgattacgccaccgttacctgagatttaccgaatacctaatcctccaccaaagcttccggagatctcaattcctccgacacttacgctctctccatct  15202900                                                                                                 ----                                                                                                -----                                                                                                -----                                                                                                <----                                                                                               <-----                                                                                              -------                                                                                              <------ZmHOX2a(2)                                                             ----------->RAV1(1)             <-------                                                          --------->ANAC46                   --------                                                          --------->ANAC58                   <-------               --------->TOE2(3)                          --------->ANAC58                   --------     --------->ANAC46                                   --------->MYB52(1)                   --------     --------->ANAC58          <---------KAN4(2)        ---------->DOF2           ------>ZmHOX2a(1)     --------->ANAC58      <---------HSFB2a(2)        <---------MYB52(2)          ===================   --------->ZAT6          --------->HSFB2a(2)      --------->ZAT6            <---------GLK1(1)------   <---------ALFIN1      ------>ZmHOX2a(1)      <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)===================HOX2a_HOX2a   cccaaacactccaatttcgtcaatttcctcgagaacaatctccctcaccatcaaacactaacgccacaaactcttcttggattcctccgttccaagatcc  15203000    ------>MYB46(1)    ------>MYB83  ------->GAMYB --------->MYB46(3) ----->LBD16                                           --------->ANAC58 ---->ANAC46                                           --------->ANAC46 ---->ANAC55(2)                                      --------->ANAC46 --------->ICU4 -----ANAC55(2)                                --------->ZAT2         <---------YAB1 --TEIL  <----------DOF2                       <------NtERF2     --------->ANAC55(2) -->CCA1(2)                                    <---------At4g35610<---------RAP2.6(3)    <---------HSFB2a(2) --ARR14(2)                                    --------->At4g35610<-----------TGA1       --------->HSFB2a(2) ->ARR14(2)                          --------->AHL20(2)--------->ANAC58<---------ICU4   <---------LBD16 --ARR11(3)           <---------YAB1 <---------AHL20(2)----------->HVH21       --------->GLK1(2) ->AGP1--------->At4g35610      ------>NtERF2  <---------ZAT2<----------DOF2  <---------GLK1(2)     < ->ARR11(3)         <---------ICU4 <----------DOF2 <---------ALFIN1<---------MYB52(1)  ============== =HOX2a_HOX2a      --------->ICU4 <-----------------AGL3  <---------ALFIN1  <---------YAB1          - >ZmHOX2a(2)--------->ZAT14    --------->DEAR3(1) --------->ZAT14--------->ANAC46      ------>ZmHOX2a(1)   gtaaccatccgctctacgctcattatgacttcgccgtctttaattgggcagctacactcgacactttccgtcatgatcacgattctttcctctggatgtc  15203100  Previous    Next  AGI:  At2g36230.1    Description:  APG10 (ALBINO AND PALE GREEN 10); 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase. Identical to 1- (HIS6) [Arabidopsis Thaliana] (GB:O82782); similar to unnamed protein product [Vitis vinifera] (GB:CAO15905.1); contains InterPro domain Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase, eukaryotic; (InterPro:IPR011858); contains InterPro domain Ribulose-phosphate binding barrel; (InterPro:IPR011060); contains InterPro domain Ankyrin (InterPro:IPR002110); contains InterPro domain Histidine biosynthesis; (InterPro:IPR006062); contains InterPro domain Aldolase-type TIM barrel Range:  from: 15200773    to: 15202617    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g36240.1    Description:  binding. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT1G09900.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14560.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 15202732    to: 15204343    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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