Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-      --------->MYB52(1)                                                                          <--     <------ZmHOX2a(1)                                                                            ===   <---------TOE2(3)                                                                          -------   <---------ANAC55(2)                   ------>ZmHOX2a(2)                             ------>MYB46(1)   <---------------AtSPL8              --------->ARR14(2)                              ------>MYB83-- ---------YAB1                         <---------ARR14(2) --------->ICU4              ----------->RAV1(1) ------YAB1                            <---------AGP1     --------->AHL20(2)         ------->GAMYB=== ----->ICU4                       -------->ZAP1           <---------AHL20(2)        --------->MYB46(3)   ttattaaggaacggagaagttttttttttttttttgacctagatcggtgaagaagttgtattaattgttgtatcgcacaaactataaccaacaaaaaaaa  15184500                  ------>ZmHOX2a(2)                 --------->GLK1(1)                --------->ARR11(3)                <---------ARR11(3)                <---------ARR14(3)                <---------ARR14(2)                --------->ARR14(2)        --------->GLK1(2)<---------LBD16 --------ARR14(2)<---------GLK1(1) ----ZmHOX2a(1)--------->GLK1(1)                                                      <---------MYB52(2) =======================HOX2a_HOX2a                                             --------->AHL20(2) --->DOF2      <---------GLK1(1)--------->AtLEC2 <---------ANAC46        --------->ANAC58 ------->ARR14(2)<------ZmHOX2a(2)               <---------ZAT6          --------->ANAC58 --------->ZAT6 ========================HOX2a_HOX2a   <-----------GT1       <----------DOF2>>>>>>>>>>GT-3b  --------   ggatttgaagaatttggagatctcttatcgggcaatgcaaataacttcttagtgtggaatcaactttcatttcacaagaaaaataaaaactaacaccaaa  15184600                                                                         <---------MYB52(1)                                                                        --------->TOE2(3)     <---------ICU4                                                     <-------GAMYB     -------->ATHB1                                                    ----------->GT1            ---     --------->ATHB12                                                ------->TEIL               -----    <---------YAB1             <-----------GT1                       <---------At5g28300    <-------GAMYB   <---------ARR11(3)<----------ID1                          <------ZmHOX2a(2)             <---------MYB46(3) ->AtMYB61       ---------->DOF2                            <---------ARR11(3)       <----------DOF2   accaaaatcattgaaaactaaaagaaacaaatatttccaactaaattttgaagagagggagagatcaaatgtaccgttaatccaatgctttggaggttga  15184700                                                                                                   <-                                                                           <-------TEIL          ----          <---------AGP1     ----------->HVH21                     --------->At4g35610          <---- -------->GT1        <---------YAB1                            <---------ARR14(2)        --------->YAB1 ----->DOF2       --------->ICU4            <---------YAB1    <---------CCA1(2)       <----------DOF2   aagtgaaaactaggtctgtgaagatgattcactgactcgactgattcagattgcaattcttcgtaaatctgatgaaatgcatcaattcctttgatatttt  15184800                                                                                            ---------                                                                                            ---------                                                                                          <---------MYB52(1)                                                                                          <-------GAMYB                                                                                        <---------ANAC58                                                                                        <---------ANAC46                                                                                        <---------ANAC58                                                                                ------>ZmHOX2a(2)                                                                               <------ZmHOX2a(2)                             <---------ICU4                                    --------->At4g35610                             --------->YAB1                                   --------->ARR11(3)                            <---------YAB1                                    --------->GLK1(2)                         <---------ATHB12                                     <---------ARR14(2)                         <---------ATHB51                                     <-----------ARR10             <---------------AtSPL8                                           <---------ARR11(3)  <---------ANAC46       --------->ICU4                                       <---------AGP1<--------  <---------ANAC58  --------->ANAC58                                          --------->ARR14(2)  <---------ANAC58  --------->ANAC46                                         <------ZmHOX2a(1) --------WOX13(1)   --------->ANAC58 ----------->GT1                      <-----------RAV1(2) ----->ATHB12<---------ICU4 --------->ICU4                       ===================HOX2a_HOX2a -----YAB1--------->ATHB12--------->YAB1                         ------>ZmHOX2a(2)   --------->ALFIN1   gattgcttaaattgattagtacaagcaataataataagacagaaataacatttgaaatagccattgatccaaagactcaggatctgagtggcgtttgtta  15184900                    <---------AHL20(2)                                  <-----------TBP            --------->ZAT14                                             --------->AHL20(2)            --------->REM1(2)                                       ----------->GT1         <---------ANAC58                                           --------->ICU4         <---------ANAC46                        *TSS         ---------->ID1                        - >MYB52(2)  <---------ZAT14             ----------->GT1      <-------GAMYB                    <------ZmHOX2a(1) -->GT1  <---------ANAC58              --------->GLK1(2)    --------->MYB52(2)              --------- -MYB46(3) --------->ALFIN1      <------ZmHOX2a(1)          <---------MYB46(3)             <------ZmHOX2a(1)   aatgtttttggccgtgtagtatttaagttgaataaggagagaatgtgataagtggaagtagtttgttgtaatgtttatataggcgaaatatgaggaggaa  15185000                                                    <-----------GT1                                                <---------RVE1(1)                                           --------->LBD16                              --------->YAB1   --------->ARR11(3)                              --------->TOE2(3)<---------GLK1(2)                             ----------->GT1   <---------ARR11(3)                            <---------TOE2(3)----------->ARR10     XXXXXXXXXXXXXXXXXXXX>MIR861-5P                        ========================HOX2a_HOX2a     <--------HAHB4                <------                        =======================HOX2a_HOX2a      --------->YAB1               --------                        --------->YAB1  <------ZmHOX2a(2)      <---------YAB1 <-------TEIL   <-------                 --------->ICU4        --------->ARR14(2)    --------------->AGL15   <-------GAMYB -------->MYB52(1)    <---------TOE2(3)<---------ARR14(2)    <---------------AGL15  --------->LBD16 --------------->ANAC81 <------ZmHOX2a(1)------>ZmHOX2a(2)  <-----------------AGL3<---------LBD16  <-   gataacagaaacatagataatttttaggataatgttaatccgatccgaagatttttactctcactataattagagaaatatacatccggttgaaattaaa  15185100           --------->MYB55(2)          <---------DEAR3(1)         <------NtERF2        <---------RAP2.3(1)        <---------ORA47(2)        <---------ATERF1(1)       <---------DEAR4(1)       --------->ETT(1)       <---------DREB2C(2)       <---------DEAR3(1)      <---------ORA47(1)     <-----------HVH21    <------MYB83    <------MYB46(1)   --------->MYB59        --------->ARR11(3)                       ------->TEIL   <---------MYB46(3) ------>ZmHOX2a(1)                    --------->YAB1--------->AHL20(2)   <---------AtMYB61 --------->TOE2(3)                     --------->TOE2(3)  ---------->DOF2 ---AHL20(2)<-------GAMYB<---------CCA1(2)               <---------ARR11(3)  <---------AHL20(2) ->AHL20(2)<---------MYB46(3)                            --------->ARR11(3)  --------->AHL20(2) --AHL20(2)<---------DEAR3(2)                           <---------CCA1(2)<---------YAB1   --------->HSFB2a(2) --------YAB1        <---------ANAC46                 --------->YAB1     <---------AHL20(2)   tatgtttggtcggcggtttgattccttatatctagggttttctcatgtgtaatcaaacatatcttaatggatgttttaattaaagtgtgttactggaata  15185200                                       <---------MYB52(1)            <---------AHL20(2)                                      <-------GAMYB               --------->AHL20(1)                                     <---------ANAC58             <---------AHL20(1)                <                                     <---------ANAC58             --------->ARR11(3)                -                                  <---------ARR14(2)              <---------ARR11(3)             ----                 --------->YAB1   --------->ARR14(2)       <---------ANAC58            --------->GLK1(2)            <------MYB46(1)       --------->GLK1(2)        <---------ANAC46            <---------ARR11(3)            <------MYB83      <---------TOE2(3)            <---------ANAC58            --------->ARR11(3)           --------->MYB59<----------DOF2          --------->bZIP60(1)                --------->RVE1(1)           <---------TOE2(3)----------->HVH21      <---------bZIP60(1)              --------->AHL20(2)   tgtgtatatagattaggtttcataacttctttgacgattccgttgctcaaatgaagtcatggcttgaatattttttttttttaaaaaaaaatctaacaag  15185300                                                                                         --------->AHL20(2)                                                                                         <---------AHL20(2)                                              --------->MYB52(2)                      <--------HAHB4                                            <--------P                                --------->ATHB12       --------->YAB1                       <---------MYB52(1)                        <---------ICU4      <---------AHL20(2)                  <---------MYB46(3)                          --------->YAB1      <---------YAB1                   <---------ANAC58                              <---------YAB1   <---------AHL20(1)                  <---------ANAC58                              --------->ICU4 <   --------->AHL20(1)     <<<<<<<<<TBF1<---------ANAC46                              <---------ATHB12 ---------AHL20(2)    <-----------GT1 <---------TOE2(3)                          <---------MYB52(2) - -------->AHL20(2)<---------AHL20(2) <-----------GT1                      <-----------HVH21        -- ----->YAB1  <---------AHL20(2)    <---------AHL20(2)                <---------AHL20(2)--------->TOE2(3)   aattatatattatagtttattttttttcttcttctaatttaacgtggttagtttagcaaatttcaaactatatttttgtcacaactaatcattaatttct  15185400  Previous    Next  AGI:  At2g36190.1    Description:  ATCWINV4 (ARABIDOPSIS THALIANA CELL WALL INVERTASE 4); hydrolase, hydrolyzing O-glycosyl compounds. similar to ATCWINV2 (ARABIDOPSIS THALIANA CELL WALL INVERTASE 2), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT3G52600.2); similar to ATCWINV2 (ARABIDOPSIS THALIANA CELL WALL INVERTASE 2), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT3G52600.1); similar to beta-fructofuranosidase [Daucus carota] (GB:CAA49162.1); similar to cell-wall invertase [Populus alba x Populus grandidentata] (GB:ABY81289.1); similar to cell-wall invertase [Populus alba x Populus grandidentata] (GB:ABY81288.1); co Range:  from: 15181809    to: 15184949    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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