Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          <------NtERF2                                       ------>NtERF2                                       <---------RAP2.3(1)                                      <---------DEAR3(1)                                      <---------RAP2.6(2)                                        <---                                      <---------RAP2.3(2)            --------->ANAC58            <--- ---------AHL20(2)           --------->LBD16                         --------->ANAC58            <--- ------->AHL20(2)           <---------ANAC46                 <---------------AtSPL8    <---------At4g35610 ------->ICU4        --------->YAB1  --------->RAP2.6(3)  <---------AHL20(2)          --------->ANAC58 --------ATHB12 <---------ANAC46   --------->DAG2        --------->AHL20(2)           --------->ANAC58 --RAV1(1)    ------>ZmHOX2a(1)  ---------->DOF2         <---------AHL20(2)   <---------YAB1     <---   aataaatagagtaatccttcgtataataagccgtagaaaggcggctattgttgaagtttttaaattgtaccacgaccaatattgttgtaagctactacta  15173500                                                <---------ANAC58            --------->LBD16                                                <---------ANAC58           --------->ANAC46                                                <---------ANAC46           --------->ANAC55(2)                                                <---------bZIP60(2)       <---------LBD16                                              <---------TGA2(2)    --------->AHL20(1)                                             ----------->HVH21     <---------AHL20(2)                             <---------YAB1  ----------->TGA1      --------->AHL20(2)                        --------->GLK1(1)   <-----------HVH21      <---------AHL20(1)                        <---------GLK1(1)  --------->ANAC46       <---------AHL20(2) ------ANAC58 <---------------AGL15    ------>ZmHOX2a(1)          --------->AHL20(2)           <----- ------ANAC46 --------------->AGL15   --------->TOE1(2)        <---------AHL20(2)          <---------TOE2(3) ------ANAC55(2)<---------YAB1   <---------MYB46(3)   --------->GLK1(2)  <-----------GT1   --------->MYB59 ------ANAC58<---------YAB1--------->YAB1  --------->ANAC55(2)--------->AHL20(2)     ---------->DOF2   cgtgtgtatcaagtttttataaatggaaatcatagttgttcctacgcgtgacgtagaatctatattaaataaattttacggagtatgcaaagtaaggtac  15173600                                                                             --------->YAB1                                                                             <---------ICU4                                 <-------TEIL                                ---------->DOF2                              <------MYB46(1)                                <--------ATHB1                              <------MYB83                                  <---------ATHB12                             --------->MYB59  ----------->HVH21             <---------ATHB51                      <----------DOF2       --------->ANAC55(2)        --------->TOE2(3)      <------          <------ZmHOX2a(1)  <---------------AtSPL8           --------->TOE2(3)            <---------AHL20(2) --TEIL --------->MYB59  --------->ATHB12   <---------ANAC55(2) --------->AHL20(2)     ----------->GT1   atgagtgaattaggacacatacaactttgatttggtacatgacaacaagtgacaatatgaagaacattaaaaacatcaataatgcccaaaggtttaattg  15173700                <------NtERF2      <---------AHL20(2)      --------->AHL20(2)     <---------AHL20(1)                                           --------->AHL20(2)     <---------AHL20(2)                                          <---------YAB1     --------->AHL20(2)                                   --------->YAB1--------->ZAT6  --------->AHL20(2)                                <-----------GT1   <-----------GT1  <---------AHL20(2)                           <---------YAB1    <---------AHL20(2) --------->AHL20(2)                       --------->TOE2(3)     <---------AHL20(1)           -------- ---WOX13(1)   <---------MYB59  <---------ATHB12--------->YAB1<---------YAB1 ---------->DOF2 <-------   acattaatttaattgggccgaacttaattttccaatagtttcaacctctataataaacactcttaatattatttacactaaaaggcccaaaggttataga  15173800                                            <-----------------AG                                            ----------------->AGL3                                        <---------ETT(1)                                        ----------->HVH21                                       ------>ZmHOX2a(2)                                      <------ZmHOX2a(2)                                     <---------ARR14(2)                                     --------->AGP1                                     --------->ARR14(2)       --------->REM1(2)                                    --------->At4g35610       --------->ZAT14                --------        ------>NtERF2            <------ZmHOX2a(2) <---------TOE2(3)                        <--------       --------->DEAR3(1)      <------ZmHOX2a(1)  --------->DAG2   <-----------HVH21        ---------       ----------->HVH21       ==============HOX2a_HOX2a      <---------ZAT14            --------->ARR14(2)      --------->DEAR3(2)     <---------TOE2(3)   ---------->DOF2  <---------ANAC58       <---------ARR14(2)     <---------At4g35610   ---------->DOF2  <-----------------AGL1<---------ANAC58     <---------DEAR3(2)  ---------->DOF2       --------->YAB1--------->CCA1(2) --------->ANAC58            ------>ZmHOX2a(1) ->HSFB2a(2)        ----------->GT1----------->ARR10*TSS--------->ANAC58        --------->ANAC46   -- --HSFB2a(2)   ---------->DOF2 ===============HOX2a_HOX2a    --------->ALFIN1 <---------ALFIN1------>NtERF2   aaattagagccgacccataaaaccgataataaaggatcagatccgacccgataaaggtaagcagtgtagcgtcgcatcatacactccttcggttcccgac  15173900                                                                        <---------ARR14(2)                                                                        --------->ARR14(2)                                                                    <------NtERF2                                               --------->ANAC58   --------->DEAR3(1)                                         --------->RAP2.6(3)     <---------LBD16       <----------DOF2                   --------->DDF1         ------>NtERF2       <---------DAG2         --------->At4g35610   ----------->HVH21 <---------MYB46(3) ->LBD16                      <---------At4g35610<---------ARR11(3)--------->LBD16               <--- -HSFB2a(2)                <-----------HVH21<------NtERF2     --------->ZAT18                    ---- >HSFB2a(2)  <-----------GT1 <---------DEAR3(1)--------->ANAC58 <------NtERF2                <------- ----->TEIL<-----------GT1--------->ANAC46--------->ETT(1) <---------GLK1(1)       <---------ARR11(3)   gaatcgctgcttttttctctctctctctccgtcgctgaaaaatgtcggcaagacctgaaggaagtccgccggaggttacgctcgagacctccatgggtcc  15174000                                                                       --------->YAB1              <-                                                                      <-------TEIL                 --                                                           ------>NtERF2                          ---           --------->ARR14(2)                              --------->ANAC46                       <--    <-----------HVH21                         --------->YAB1------>NtERF2                         ---   --------->DEAR3(1)              --------->MYB52(1)    <---------LBD16                   ------->TEIL <---------At5g28300             <----------DOF2         --------->RAP2.6(3)            --------->ANAC58 -------DOF2             <----------DOF2  <---------WRKY12 --------->LBD16              --------->ANAC46 -->ZmHOX2a(1)           <---------DAG2  <------ZmHOX2a(2)<---------RAP2.6(2)           --------->ANAC58 --PCF2    <---------ARR14(2)---------->ID1   --------->TOE2(3) ----------->HVH21<---------At4g35610-   tttcaccgtcgaggtttctctctctcactttttcgcttatcggatcaacgataacacattccggccatgacattcatatatagagcttacacgaacttga  15174100 -----ZmHOX2a(2) ------->CCA1(2) ------>AGP1                                --------->HSFB2a(2)                       <---------TOE2(3) -------ARR11(3)       <-----------GT1      --------->HSFC1(1)                    <----------DOF2 ------>ARR11(3)  --------->YAB1            <---------HSFB2a(2)   <------ZmHOX2a(1)   <---------TOE1(3) ----->ZmHOX2a(2)<---------YAB1   --------->YAB1             <----------DOF2     <----------DOF2   gatctagatttcattctctataattctacattccaattgtatttttctcgaatcgagcttaaactttaggattttagaacggggttttagggtttacaat  15174200                                                                  <---------ANAC58                                                              <---------HSFB2a(1)                                                             --------->HSFC1(2)                                                             --------->HSFB2a(1)                                                             <---------HSFB2a(1)                                                            <-----------ARR10                                                            <---------ARR14(2)                                                           <------NtERF2                                                          --------->LBD16                                                         --------->LBD16                                                         <---------HSFB2a(2)                                                         <---------ATERF1(2)                                                         --------->HSFB2a(2)                                                  <---------ARR11(3)                                                  --------->ARR11(3)   --------->At4g35610                                               --------->LBD16--------->HSFB2a(1)                                               --------->HSFB2a(2)<---------ANAC58                                         --------->ANAC46--------->ETT(1)           ----------->GT1                                       <---------ALFIN1 <---------LBD16<---------At4g35610                          <---------At4g35610 --------->LBD16<---------HSFC1(2)--------->LBD16                 <---------ICU4        --------->ZAT6  --------->MYB52(1)    <---------LBD16<--------     ------>ZmHOX2a(2)    --------->At4g35610--------->LBD16--------->ARR14(2)--------->LBD16--------   gttttgatctgtgtgtcaatttttactcagatgtattacaaacactccccgagaacttgccggaacttccttgagctatcccggagaggttactatgaca  15174300                                                                             <---------YAB1                                                                        --------->ATHB12                                                                        <---------ICU4                                                                       --------->ICU4                     <---------TOE1(3)                 <-------GAMYB   <---------YAB1                     <---------TOE2(3)            <---------DAG2     --------->YAB1         =========              --------->ARR14(2)                  <----------DOF2   ===============================HOX2a_HOX2a              --------->GLK1(2)               <---------ZAT14       <------ZmHOX2a(2)       <------ZmHOX2a(1) -YAB1       <---------GLK1(2)                --------->ZAT14      --------->ARR11(3)     <---------TOE2(3) ->YAB1   --------->ANAC46                    <---------ZAT18      <---------ARR11(3)     <---------TOE1(3)   acgttctgtttcacagaatcgtcaaggtatgttttctgtgtgtttcagtctacttttcgttgtacttaagatcatcattgtgatgaagttttaaggaaat  15174400  Previous    Next  AGI:  At2g36120.1    Description:  pseudogene, glycine-rich protein Range:  from: 15172516    to: 15173544    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g36130.1    Description:  peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative. similar to CYP71 (CYCLOPHILIN71), chromatin binding / histone binding / peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] (TAIR:AT3G44600.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15869.1); contains InterPro domain Cyclophilin-like (InterPro:IPR015891); contains InterPro domain Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; (InterPro:IPR002130) Range:  from: 15173852    to: 15175576    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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