Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              --------->LBD16                                           <---------HSFB2a(2)                                           --------->HSFB2a(2)                                           --------->ANAC46                                          <---------LBD16                                        <---------ARR14(2)                                        --------->ARR14(2)                               --------->KAN4(1)                  <----------DOF2       --------->GLK1(2)             --------->CCA1(2) --------->GLK1(1)            --------->ARR14(2)<---------KAN4(2)--------->GLK1(1)       <----------DOF2            <---------ARR11(3)--------->ARR14(2)                 --------->WRKY18(1)            --------->ARR11(3)<---------ARR11(3)               --------->bZIP60(1)  <-------TEIL <-----------GT1--------->ARR11(3)               <---------bZIP60(1)         --------->LBD16 ---->GT1   <---------ARR14(2)<---------ARR14(2)          <---------At4g35610             <---------ANAC46   aatatacatatacagatatacttttctagtgggatattcaagtatccggaaatcgaatgcctctgaggtcatgcttttgctaaatattcttcccgtggac  15165200                                                                                      ---------->DOF2                                                                                    <---------YAB1                  --------->ATHB12                                                <---------ICU4                  --------->YAB1                                                  --------->YAB1                 <---------ATHB12       --------->ARR11(3)                       --------->ICU4               --------->WOX13(1)       <---------ARR11(3)                     --------->WOX13(1)            --------->ARR11(3)  --------->AHL20(2)            <-------TEIL   ------>ZmHOX2a(1)            <---------ARR11(3)  <---------AHL20(2) <---------ANAC58         --------->TOE2(3)         --------->AHL20(2) <---------AHL20(2)     <---------ANAC58--------->YAB1<---------ATHB12   attttcttacataaaatctatcatttgtttttatttttttaaaatctataatttcgttctaaaattcatttatagtctcctcaatcatgaaagtttagtt  15165300                                        <-----------GT1            <---------AHL20(2)       <---------ICU4           <---------AHL20(1)        --------->YAB1                          <---------TGA2(1)           --------->AHL20(2)       <---------YAB1                           --------->bZIP60(1)           <---------AHL20(2)     --------->YAB1                             --------->TGA2(1)           --------->AHL20(1)    <---------YAB1                              <---------bZIP60(1)       --------->AHL20(2) <---------ARR11(3)                           <---------AHL20(2)        <---      --------->AHL20(2)  --------->ARR11(3)                          <---------AHL20(2)         <---  <---------ATHB12        --------->GLK1(2)                           --------->AHL20(2)        ----- --------->ANAC46        --------->RVE1(1)                        --------->AHL20(2)            <----   tccaaacaataaataaaatttgacaaaaaatctatatgataataactcaatcgaagacttgaagtacttaaaataaatgatgtcagtaatatcacataga  15165400                                                                            <---------AHL20(1)                                                               --------->ATHB51         ----------->TGA1                                                               <---------ICU4     <---------TOE2(3)                                                              <---------YAB1--------->AHL20(2)        ---------->DOF2                                   ------>NtERF2     <---------AHL20(2)      - ------CCA1(1)                                            ----------->RAV1(1)<---------YAB1<---------ANAC46 ------RVE1(1)                                           <---------ETT(1)  --------->YAB1 <---------TOE2(3) ---->ARR11(3)                                           --------->ANAC46  --------->AHL20(2)     --- -----ARR11(3)                                <---------ICU4  --------->ICU4--------->AHL20(1)  <----   tatttttaaaaaaagagtcgaaattttcttatttgtttatgtcactaatcttttcaactccgacataattgtctctattatattaagaaaatgacgttaa  15165500                                                          --------->DAG2                                                       --------->AHL20(2)                                                   <---------YAB1                                                <---------YAB1                                               <------------CBF                                              -------->ATHB1                                              --------->ATHB51                                        <---------ZAT6 <---------AHL20(2)                                      --------->MYB52(2) ---------->DOF2                                    <---------MYB52(1) --------->YAB1 ---------->GT1                --------->ARR14(2)----------->GT1                                 ---- ------->DOF2                  <---------ARR14(2)--------->YAB1 ---------->DOF2              <------- -----TOE2(3)   ------->TEIL<---------ALFIN1 <---------YAB1----------->GT1             ---------->DOF2   gaaagaaaaaaaacaatgtatcaacttgccccagtttcggtagtggtattattgtaataaaaagtaaaaagatggaattttgtcaaacaaaaagactttg  15165600                                        *TSS      --------->YAB1                  --------->ZAT14      --------->TOE2(3)                  <---------ZAT14    <---------YAB1                      <---------ICU4                 <-----------HVH21  --------->ARR11(3)                   --------->YAB1                --------->ANAC46    <---------ARR11(3)                  <---------ATHB12        <---------AHL20(2)         --------->RVE1(1)          <---------ATHB12        ----------->TBP            --------->CCA1(1) <---------ICU4     --------->ICU4  <---------ANAC46      ----------->TBP    <---------WOX13(1)       <---------ICU4      --------->YAB1    --------->O2 ------>ID1 <-----------GT1   --------->TOE2(3)  <---------AHL20(2)  --------->ICU4     <---------O2 ---DOF2--------->AHL20(2) <-----------GT1   --------->AHL20(2)<---------ICU4   ---------->CDC5   acgctcttatataaatacccttcactgattaaccaaaatatcattaactaaataatcactcccaattagtactaatcatcactcagggcaacgtgaacag  15165700                                                                          <---------bZIP60(1)      --                                                                          --------->bZIP60(1)      <-                                                                       --------->bZIP60(1)         --                                                                       <---------ETT(2)            --                                                                       --------->ETT(2)            --                                                                       <---------bZIP60(1)         --                                                    <---------AHL20(2) --------->TGA2(1)           --                                                   --------->AHL20(2)  <---------TGA2(1)           --                                            --------->MYB52(1)        --------->RAP2.6(3)          <-                                      --------->AtMYB61             ----------->HVH21              <-                     ------>ZmHOX2a(1)<---------ALFIN1              ----------->TGA1     <---------CCA1(2)                    <---------ALFIN1 --------->MYB46(3)        --------->ORA47(1)     ---------------                  ------>ZmHOX2a(1)  <---------MYB55(2)    <---------ALFIN1 <---------YAB1--------->ARR11(3)        ----------->GT1 ------>ZmHOX2a(1) --------->At5g28300 --------->DEAR3(1)  <---------GLK1(2)--   agtctagagatggctaattcctcctccttctccccctctaccaccgtaacagatttaatctccaccgtccatgacgacatcatagagtctcacatcttga  15165800            --------->ATERF1(1)                                                                     -          --------->ANAC46                                                                          -         <------NtERF2                                                                              <         --------->RAP2.3(1)                                                                        <        <---------ORA47(2)                                                                          -        <---------ERF1                                                                              <        <---------DEAR4(2)                                                                          -        <---------ATERF1(1)                                                                         >        ------>NtERF2                                                                               <        <---------RAP2.3(1)                                                                        >>        <---------RRTF1(1)                                                                         --       --------->ANAC46                                                                            --       <---------DEAR3(1)                                                                          --       <---------RRTF1(3)                                                             <---------ARR11(3)       <---------RAP2.3(2)                                                            <---------ARR14(2)       <---------RAP2.3(3)                                                 ==========================    ----------->HVH21                                                      ------>ZmHOX2a(1)       <-   <---------HSFB2a(2)                   ------>ZmHOX2a(1)                 ----------->RAV1(2)     ==   --------->HSFB2a(2)                 --------->bZIP60(2)               ------>ZmHOX2a(2)         <- ------->ANAC58                       ------>NtERF2                     <------ZmHOX2a(2)          -- --------ANAC55(2)                   <---------ALFIN1                  <---------ARR11(3)          <- ------->ANAC46                      --------->DEAR3(1)                <---------GLK1(2)         <--- ------->ANAC58                     --------->ORA47(2)                 --------->ARR11(3)      <----- ------->ANAC55(1)                  --------->ATERF1(1)                --------->ARR14(2)      <----- ------->ANAC55(2)                  --------->DEAR4(2)                 <---------ARR14(2)      <----- ------->O2 <------NtERF2          <---------RAP2.3(1)                 --------->AGP1 --------->ARR14(2) ------->bZIP60(2)                 <---------ATERF1(1)                <---------GLK1(1)       <------ --------O2------>NtERF2           ------>NtERF2                      --------->GLK1(1)       ------- --------TGA1a  --------->TOE1(3) <---------ANAC58                   ----------->ARR10--------->ARR11(3) -------->TaNAC69(2)       <---------CCA1(2)<---------CCA1(2)       --------->YAB1    <-----------ARR10 ------->TGA1a  --------->TOE2(3) <---------ANAC58   <---------ICU4<---------ATHB12   --------->GLK1(2)   cacgtctcgacggcgcaaccttagcatccgtctcttgcgcctcctcacatcttcatcatctcgcttccaatgagatcctctggtccaaaatctgccgatc  15165900 ------>MYC2 ------>MYC3 -------MYC2 -------MYC3 ------>PIF5 -------PIF5 ------>MYC4 >>>>>>>>>AtbZIP1 -------MYC4 >>>>>>>>HY5 ------->ANAC46 ------->PIF3(3)                                                      --------->SPL7              --- ------->O2                                                           <-------TEIL                <-- =HOX2a_HOX2a                                                         --------->ZAT14             --- --------PIF3(3)                                                      <---------ZAT14            <--- ========================================bZIP_DOF                  --------->LBD16             ------ --------TGA1a     <---------MYB46(3)                              <---------DEAR3(2)          <----- ------->TGA1a     --------->ABI4(2)                              --------->ATERF1(2)         <------ --------O2       --------->ALFIN1                                <---------ATERF1(2)      <--------- ------ALFIN1     <---------AtMYB61     ------>NtERF2            <---------LBD16           --------->SPL7 -----------PIF3(2)--------->MYB55(2)  --------->DEAR3(1)       --------->MYB52(1)        <---------MYB52(1) -ZmHOX2a(2)     <---------MYB52(1)    ----------->HVH21       --------->DEAR3(1)        <---------SPL7 ------------PIF3(1)----------------------->TaNAC69(2)         ------->GAMYB        --------->ETT(2) ---ARR14(2)    --------->LBD16        --------->ANAC46       --------->MYB46(3)  ------>ZmHOX2a(2)-- -->ARR14(2)  <---------LBD16 <----------DOF2                 --------->DEAR3(2)--------->ARR11(3)---   cacgtggccttcttgctccggtggttctcgttctttcttctccgacgcttattctatggtggaaaccgccggtacagtctctgatctcgaccgtccgttt  15166000                     ------>ZmHOX2a(2)                   <---------ARR11(3)                   --------->ARR11(3)                   --------->ARR14(2)           --------->ANAC46           --------->DEAR3(1)          <---------LBD16        ------>ZmHOX2a(2)       <---------GLK1(1)      --------->ARR11(3)      <---------ARR11(3) ------>ANAC46     <---------AGP1                                                <------NtERF2 -------HSFB2a(2)  <-----------ARR10                                             --------->ALFIN1 ------>ANAC55(2)  <---------ARR14(2)                                          <---------ANAC58 ------LBD16--------->LBD16 --------->ZAT14                                    <---------ANAC58 --->ARR14(2)   --------->ALFIN1                                               <---------ANAC46 ----ARR14(2)  --------->LBD16                             --------->REM1(2)  <------NtERF2 ---MYB52(1)------>NtERF2   <---------ZAT14             <---------ANAC46     ------>NtERF2 --------AGL1 --------->DEAR3(1)                        <---------ANAC58    <---------DEAR3(1)     <- ------->LBD16<---------ANAC46                          <---------ANAC58 ----------->HVH21        <-- ------>HSFB2a(2) <---------CCA1(2)                    <-----------------------TaNAC69(2)    --------   ccggaattgatctccgccgtggatcttcactacagagggaagttgatttttagtagagtcgtgaagacggagactacgacggcgtggtttaagagttcgc  15166100  Previous    Next  AGI:  At2g36090.1    Description:  F-box family protein. similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT2G27310.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15864.1); contains domain SSF81383 (SSF81383) Range:  from: 15165640    to: 15166718    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version