Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           --------->YAB1                                                  --------->YAB1        <<<<<<<<<ARR1                                                  <---------ICU4        <---------ATHB12                                                 <<<<<<<<<ARR1          <<<<<<<<<ARR2            <---   <---------GLK1(1)                             <---------ATHB12     --------->WOX13(1)        <---- ----->ICU4                --------->ZAT14       <<<<<<<<<ARR2        --------->YAB1           ------ ------YAB1   <---------ARR11(3)         ------>ZmHOX2a(1)           --------->MYB46(3)        ------ ----At4g35610--------->ARR11(3)       ----------->RAV1(2)--------->MYB52(1) --------->AHL20(2)<-----   tgatgaaatctcccaacatcttcgaccagtttagacttatctcctgttacaatcataacaaaaccgattcaacaatcatatatatatcagacgaatagat  15132300                                                                      --------->TOE2(1)                                                                      --------->ANAC46                                                                     ------>ZmHOX2a(1)                                                              ------>ZmHOX2a(2)                                                              ==============HOX2a_HOX2a                                                             <------ZmHOX2a(2)                                                             ===============HOX2a_HOX2a                                                            <---------AGP1                                                            <---------ARR14(2)                                                            --------->ARR14(2)                                                            <-----------ARR10  -------->ATHB1                                           <------ZmHOX2a(2)<---------ARR11(3) --------->ATHB51                                           =================================HOX2a_HOX2a                                           ====================HOX2a_HOX2a  <---------ICU4     <-----------GT1                      <---------ARR11(3)--------->ARR11(3) --------->ATHB12 ----TEIL                         <---------ATHB12      <------ZmHOX2a(1)  --------->ICU4 --ZmHOX2a(2)                   ------>MYB83            =============HOX2a_HOX2a     ------->TEIL --->ARR11(3)                   ------>MYB46(1)     <---------MYB52(1)--------->TOE1(1)--------->TOE1(2) --->AGP1                     <---------MYB59---------->DOF2--------->ARR14(3)--------->ICU4       -- ----ARR11(3)               ------->TEIL  --------->ARR11(3)<---------ARR14(3)<---------YAB1   >>>>>>   ccatttttaagcgtttaacaaatgcaaatgaacctaatgaagaagatcaaagacgttaggaagatctcgtcctcgtaagaattattgaacgtatgaagaa  15132400                                                                                           <---------AHL20(2)                                            <------ZmHOX2a(2)                              --------->AHL20(2)  <---------YAB1             --------->ANAC46                                  <---------MYB46(3) ------->GLK1(2)             --------->ANAC58                              <---------AHL20(2)    <--- >>>TBF1                     --------->ANAC58                 <------ZmHOX2a(2)<---------ICU4 <------   gaatatgaatggaattggtgtttttttcttcaaggaacccagagggatcaaaactgcaaatgagatcaaaaccatgtttaatggttacagagttttatta  15132500                                                                            ----------->GT1                                      --------->TOE1(3)                --------->ANAC58                                      --------->TOE2(3)                --------->ANAC58    ----------->GT1       <---------YAB1                         --------->LBD16    --------->AHL20(2) ------YAB1             ----------->GT1     <---------AHL20(2) <---------LBD16  --------->AHL20(2) ---YAB1 --------->AHL20(2)           <---------MYB59   --------->ALFIN1  ---------->DOF2   ttagaagagaaaaaaatatgtataagttgttataaacaaacctaaatttatggagagggtgtctctccgggttaagcaaagaaaaaataaacaaaaactt  15132600                                                  <---------------AGL15                           ---                                                  --------------->AGL15                         -----                                                 <-----------------AGL3                     <--------                                                 ----------------->AGL3                   -----------                                         <---------ANAC55(2)                             <---------AHL20(1)                                         --------->ANAC58                                --------->AHL20(1)                                         --------->ANAC58                               --------->AHL20(2)             ----------->GT1     <---------YAB1  <-----------------AGL2           --------->HSFB2a(2)           ---------->DOF2   --------->ARR11(3)  ===========================================MADS_MADS     ---------->DOF2     <------ZmHOX2a(1)       ----------------->AGL2           <---------HSFB2a(2)   <---------YAB1  ---------->DOF2       --------->ANAC55(2)       *TSS     --------------->AGL15----   tgaatatcaaagacaaagaaaaaaagaggaagattatgaagacgcgtaagttctaaaattggaatacatcagggtttagtttttttagaaatatataaac  15132700                                                                                                    <                                                                                            <--------                                                                                           <---------                                                                                          --------->WRKY38(1)                                                                                          --------->WRKY12                                                                                          -----------                              <---------DOF5.7(2)                                       <---------MYB52(1)                         --------->DAG2          --------->ANAC58          <---------ARR14(2)      <-                        ---------->DOF2        ---------->DOF2             --------->MYB52(1)     --- --------->CBF  <---------ICU4--------->MYB52(1) --------->ANAC58          --------->ARR14(2)     --- ---->ANAC46   <---------AHL20(2)          ----------->RAV1(1)            <------ZmHOX2a(1)<---------WRKY18(1) -AHL20(2)     --------->AHL20(1)     <---------ANAC58              <--------P      <---------At5g28300 >TBP          --------->AHL20(2)     <---------ANAC58          <---------ANAC46   <-----------GT1--- ----->TOE2(3)--------->AHL20(2)     --------->MYB52(2)        <---------LBD16   <----------DOF2<----   gtcaataaacaaacaaaaaaattacaaaaagtaaacggtttcttgccacaaaagctacttgaatttgggggtaagaggaacgggtttaccgtttgaccgt  15132800    <---------MYB52(1)   <-------GAMYB ---------At5g28300                                                                            <----- -At5g28300                                                                                  <------- --GT1                                                                                  <---------TOE2(3) >HVH21                     <---------YAB1                                              <---------YAB1 --------WRKY18(1)          <---------TOE2(3)                                     <---------AHL20(2) ------>WRKY38(1)          <-----------GT1                    --------->DAG2      --------->AHL20(2) ------>WRKY12       <---------MYB52(1)                      ---------->DOF2      --------->AHL20(1) -------->HVH21   ------>ZmHOX2a(1)                   <-----------GT1            --------->AHL20(2) -----MYB52(1) <---------YAB1                      ------->TEIL     ------>ZmHOX2a(1) <---------AHL20(2)   ttgaccgttgtctcattatcctcgttatttaacattgttcgacgcttcatatgaatttacaaaaaaagtccttgaagaatcaaattaattaagtttgact  15132900                 --------->ARR11(3)                 --------->AHL20(1)                                                    --------->GLK1(1)               <---------AHL20(1)                                                      <---------GLK1(1)           <---------AHL20(2)                                                    <----------DOF2           <---------ICU4  --------->At4g35610                                <---------ARR11(3)          --------->AHL20(2)                                                  --------->ARR11(3)          <---------ATHB12 <---------At4g35610        --------->ANAC58        <---------ARR14(2)        --------->YAB1    <-----------RAV1(1)         --------->ANAC55(2)    --------->CCA1(1)    ---    --------->ZAT6      <---------At4g35610           --------->ANAC58  <---------HSFB2a(2)       <--  <-----------GT1<---------ARR11(3)                   <---------ANAC55(2)  <---------GLK1(2)      <-- ----WOX13(1)  --------->AHL20(1)        --------->AHL20(2)--------->GLK1(2) --------->RVE1(1) <----- --WRKY18(1)  --------->AHL20(2)  ------>ZmHOX2a(1)   --------->ANAC46  --------->HSFB2a(2)    ------   gattttacactaataaatatatattcttctgctgtccttcaaaaaaaatactaaatacgaaattctataaactactagaatatcttttgaaatccattaa  15133000                                                                                             ------>ZmHOX2a(1)                                                                                            ---------                                                                                         <---------MYB52(1)                                                                                       <---------ANAC58                                                                                       <---------ANAC58                                                                                      ---------------    --------->At4g35610                                                          --------->AHL20(2) ------>ARR11(3)                                                                 <---------ATHB51 -------ARR11(3)         ----------->GT1                                         <---------AHL20(2) ---------ARR10<----------DOF2                                                  --------->AHL20(2) ----AHL20(2)  ------>ZmHOX2a(1)                         <-----------GT1        <---------AHL20(1) --->AHL20(2) --------->TOE2(3)                  <----------DOF2    --------->YAB1<---------ICU4<----   aatctcatctaaacatcctttattcaatggataatttgaagcaaacctagtcttttttttttccaaacaaacataaactcaaaataattccgttccttat  15133100                                        ------>ZmHOX2a(1)                                       --------->TOE2(3)       <-----------GT1                                      ------>ZmHOX2a(2)      <---------WOX13(1)                              --------->AHL20(2)          <---------YAB1                           -- >TOE2(3)                     <---------AHL20(2)   <---------YAB1                                  <- >AtSPL8                      --------->AHL20(1)  <---------AHL20(1)                              --- -----YAB1                   --------->AHL20(2)   <---------AHL20(2)      <---------ALFIN1-----------   taatccaaattctaagtttttcacacatgaaaaaaattgatcctaaatgtattattttttgtgattaacaatttccacacttaaaatttgtatagaaaaa  15133200  Previous    Next  AGI:  At2g36020.1    Description:  HVA22J (HVA22-LIKE PROTEIN J). Identical to HVA22-like protein j (HVA22J) [Arabidopsis Thaliana] (GB:Q8GXE9;GB:Q8LEZ1;GB:Q9SJ48); similar to abscisic acid-responsive HVA22 family protein [Arabidopsis thaliana] (TAIR:AT5G42560.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15836.1); contains InterPro domain TB2/DP1 and HVA22 related protein (InterPro:IPR004345) Range:  from: 15130233    to: 15132667    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version