Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                <---------AHL20(2)                                                              --------->ARR11(3)                                                              <---------AHL20(1)                                                              --------->AHL20(1)                                                           --------->YAB1                                                           --------->AHL20(2)               --------->ICU4                             <---------YAB1        <----------DOF2             --------->YAB1                    <---------ARR14(2)            <-----------GT1  -------            --------->AHL20(2)                 --------->ARR14(2) ----------->GT1     --------->AHL20(2) ---------AHL20(2)                --------->AHL20(2)  <-------GAMYB     --------->AHL20(2)    <------ -------->AHL20(2)           <-------TEIL  <-------TEIL --------->YAB1  <---------AHL20(2)    -------   atttatataccaaaataaaaattaacaaaaattcattttaaaacatacatatttgctgttataatatatagttataaattttcttttttaaaatagtatc  15120600                                          <---------YAB1                                          <---------AHL20(2)                             <---------AHL20(2)                                         --------->TOE2(3)                               --------->AHL20(2)                                       --------->AHL20(1)                                <---------YAB1                                       <---------ARR11(3)                             --------->ICU4        ----------->GT1                --------->ARR11(3)                             --------->ARR11(3)        --------->YAB1            ----------->GT1      --------->ANAC58               <---------ARR11(3)       --------->ICU4         --------->ARR11(1)  --------->WOX13(1)  <-----------HVH21 --------->TOE2(3) -->ARR14(2)           <---------ANAC46--------->ICU4  --------->ANAC58               --------->AHL20(1) ---ARR14(2)           <---------ANAC55(2)--------->AHL20(2)     --------->AHL20(2)   <---------AHL20(1) -->GLK1(2)           --------->MYB59  <---------AHL20(1)    --------->AHL20(2)  ----------->GT1 ----   tgtagagcaattgttatatggagttatgtatagatttggaaaatattaatatccatcaagaaataaaaaaaatgtcattcccatggaaaatattaatatc  15120700                                                       --------->YAB1         <---------ARR11(3)                                                       --------->AHL20(2)     --------->ARR11(3)                                                      <---------YAB1  <-----------GT1            ----                                                     --------->AHL20(1)      --------->YAB1      <---             <---------MYB52(1)                      --------->AHL20(2)    ------>MYB83         <----       <---------ZAT14              <---------DAG2   <---------AHL20(2)    ------>MYB46(1)      ----- ----->WOX13(1)   ---------->DOF2   <----------DOF2 --------->YAB1--------->TOE2(3) <----------DOF2 <   catcaagagttctctgttagcaaagtagaattttaaaactttttttttgtcaaattataatataaaaacattaaaccaaatatcatcttttaactaagaa  15120800                    <---------TOE1(3)                    <---------TOE2(3)                   ---------->DOF2                <-------GAMYB              <---------TOE2(2)            <-------GAMYB                            <---------AHL20(2)           --------->MYB52(2)                   <---------AHL20(1)           --------->MYB55(2)                   --------->AHL20(1)                <---------ARR11(3)           <---------MYB46(3)                   --------->AHL20(2)                --------->ARR11(3)          <-------TEIL                          <---------AHL20(2)                --------->AHL20(1)       <---------YAB1       <-----------GT1    <---------AHL20(2)                <---------AHL20(2) <---------YAB1<---------MYB46(3)           <---------AHL20(2)                 <---------AHL20(2) ----->ARR11(3)<------MYB46(1)             --------->AHL20(2)                  --------->AHL20(2) ------ARR11(3)<------MYB83--------->AHL20(2)  --------->AHL20(2)            --------->AHL20(2) -----GLK1(1) <---------TOE1(2)            <---------AHL20(1)                <---------AHL20(2) ---->GLK1(1)<---------MYB52(1)            <---------AHL20(2)              <---------AHL20(2) ----------DOF2--------->MYB52(2)    --------->TOE2(3)                     --------->AHL20(2)     ---   atctttattatgttcgttggttaaagtaatttactatattcttaattaattttattttttttgtttgaatttagtatatatatatatattctaacataga  15120900                                      <---------YAB1                                    --------->YAB1                                    --------->AHL20(2)                                   <---------ATHB12                                   <---------ATHB51           --------->At4g35610<------ZmHOX2a(2)         --------->DAG2      <---------ARR14(2)                                          <-----------        ---------->DOF2      --------->ARR14(2)               ----------->TBP        <---------LBD16   ----------->GT1       --------->ANAC46<---------TOE2(3)  <---------AHL20(2)      ----------->RAV1(2) ---------->DOF2        <---------LBD16---------->DOF2      --------->AHL20(2)     -------->P -------->GT1 <-----------HVH21------>ZmHOX2a(2)          --------->AHL20(2)    <---------DAG2   ttgtaaagaaaaaagctgtcacaatctacgggatccaattataaaggtaaactaatgcaaatttatatatagccatagccagccttacctggattgtgta  15121000                                                                      --------->AHL20(2)                                                                      <---------AHL20(2)  -----------                                                         <-----------ARR10             --------->DAG2                   <---------AHL20(2)                    --------->ARR14(2)           ---------->DOF2      --------->ARR14(2)          *TSS     <<<<<<<<<TBF1 <---------ARR11(3)   --------->DAG2      <---------ARR14(2)   <---------AHL20(2)            <---------ARR11(1)  ---------->DOF2 -CBF --------->GLK1(2)    --------->AHL20(2)           <---------CCA1(2) --------->AHL20(2)   gccaaacaaatctgtatacatttttttttttaatttgtatacttcttcttcacttcccatatctatctatatataaataaaaagttgagaaagtgacaga  15121100                                                                            <------ZmHOX2a(2)                                                                           --------->ARR11(3)                                                                           --------->GLK1(2)                                                                           --------->ARR14(2)                                                                           <---------ARR14(2)                                                                           <---------AGP1 --------->LBD16                                                                           <---------ARR11(3)                                                                           <-----------ARR10        <                                                                          <------ZmHOX2a(1)       <--                                                                       =============HOX2a_HOX2a   ---                                                                       <------ZmHOX2a(1)<---------At4g35610                 ------------------------>ANAC81                    <-----------RAV1(2) --------->At4g35610            ---------->DOF2   ---------->DOF2                      <-------TEIL         <---------LBD16     ------------------------>ANAC81                <----------ID1--------->CCA1(2)  --------->At4g35610   ---------->DOF2<----------ID1            --------->MYB52(1)    --------->GLK1(2)  <---------At4g35610 >HVH21---------->DOF2---------->DOF2     --------->ARR11(3)   <---------YAB1------>ZmHOX2a(2)   <---   accaaaaaagaaagaaaagaaggaaaaagacagaaagagagagagataatggaagagacaaaatcaagattcaggaggatctgtgtcttctgcggaagca  15121200     ----------->RAV1(1)  --------->LBD16                                -------->P <----------DOF2  --------->ANAC46                               ------>MYB83  ------>NtERF2                                --------->AtMYB61 --------->HSFB2a(2)         --------->At4g35610 ------>MYB46(1)                     --------->AHL20(2) <---------LBD16             --------->ZAT14   <---------MYB111(2)                   <---------AHL20(2) <---------ETT(1)            <---------At4g35610--------->MYB55(1)              ------>ZmHOX2a(1) --------->ATERF1(2)         --------->ZAT2    <---------MYB55(2)            ---------->ID1 <---------HSFB2a(2)      <---------At4g35610  <---------MYB111(1)  --------------->AGL15   <-------- ---------LBD16          <---------DEAR3(1)    --------->MYB46(3)   <---------------AGL15   <-------- -------ARR14(2)      --------->ANAC46        --------->MYB46(3)   <-----------------AGL2   <-------- ------>ARR14(2)    --------->YAB1         --------->MYB46(3)      ----------------->AGL3 <---------- ------GLK1(1)      <-----------GT1        --------->DEAR3(1)    <-----------GT1--------->ICU4-------   gttccggcaacaaaaccacttatcacgacgctgctctccaactcgcccaccaactggtttctctttatttccacatttagtccttatttaaataactaac  15121300           <---------ZAT14   <---------YAB1  --------->AHL20(2)  <---------AHL20(2) --------->AHL20(2)           <---------GLK1(1) --------->YAB1          --------->At4g35610 <---------AHL20(2)      <---------At4g35610 ----MYB.PH3(2)     <---------YAB1 -MYB59    --------->ZAT14    --------->GLK1(1) -MYB52(2) <---------ZAT18   <---------ARR14(2)        <---------AHL20(2)                         <-- -GT1      --------->ZAT18   --------->ARR14(2)      <---------YAB1                          <------- -->MYB52(1)      --------->YAB1                   <---------ZAT6  <----------DOF2       ------->TEIL   taattaaaattagtgcactattatgttagcagatttcggtttactagtatttagtattatatgctaagtcttttctatgttttttgcaatgcatttcacc  15121400       ---------->DOF2                                         --------->At4g35610             ------ --------->At4g35610                                           <---------At4g35610          --------- -------MYB52(1)                                           <-----------GT1          ------->TEIL ---- ----GT1--------->DAG2                           <------ZmHOX2a(1)       <-------TEIL       ---------   attagctaaaaaagggctatacaaggtttttgtgtgatatgtatagaagtaggaactatatatacagctcatatatacataaaacgtatgtccatagtaa  15121500  Previous    Next  AGI:  At2g35990.1    Description:  similar to carboxy-lyase [Arabidopsis thaliana] (TAIR:AT5G06300.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN67407.1); contains InterPro domain Conserved hypothetical protein CHP00730 (InterPro:IPR005269) Range:  from: 15121034    to: 15123855    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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