Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        <---------SPL7                                          =======================HOX2a_HOX2a                                          ------>ZmHOX2a(2)                                         <------ZmHOX2a(2)                                        <---------ARR14(2)    <---------ANAC58                                        --------->ARR14(2)    <---------ANAC58                                        --------->ARR11(3)    <---------ANAC46                                        <---------ARR11(3)<------ZmHOX2a(1)                                     <------MYB83    <---------ANAC46   --------->ZAT18                                     <------MYB46(1)<------NtERF2       <-------TEIL                                   <--------P     --------->DEAR3(1)    --------->ZAT14            <-                                   --------->ALFIN1------>NtERF2        <---------ZAT14            <-                          <---------ARR14(3)  --------->HSFB2a(2)       <---------ZAT18            <-                          <---------ARR11(3)  <---------HSFB2a(2)      --------->ALFIN1       <------           --------->ARR14(2)     <---------SPL7  <---------DEAR3(1) <---------ANAC58      <---------DEAR3(1)      ------>ZmHOX2a(2)   --------->ARR11(3)------>ZmHOX2a(1)<------NtERF2     --------->ATHB12 <---- --------DOF2           <---------TOE1(2)========================HOX2a_HOX2a  <---------YAB1 <------NtERF2 -------DAG2  <-----------GT1    <---------ANAC46 --------->ANAC46   <---------ANAC58   ----------->HVH21   cttttcgatctcagatttacaaatcggaggtcttggggtagggatcctctcgacgccgtaggaggcgtttagggtgcaccaagattggatgagacggcgt  15091200                            <---------MYB52(1)                           <-------GAMYB                          <---------DEAR3(2)                          <---------MYB46(3)                         <---------DEAR3(1)                        <------NtERF2                       ------------>AtMYB77                      --------->ANAC46                     --------->LBD16                   <---------LBD16                   ------>ZmHOX2a(2)                  --------->ARR14(1)                  --------->CCA1(2)                  <------ZmHOX2a(2)                 --------->ARR11(3)                 <---------ARR14(2)             ----------->HVH21                 --------->ARR14(2)        ----------->HVH21      <---------ANAC58                 --------->AGP1          <------MYB83             <---------ANAC58                  <        <---------LBD16<-----------HVH21 <------MYB46(1)          <---------ANAC46                  < --------ANAC58  <---------ARR11(3)     <---------MYB46(3)    <---------ANAC58                      < --------ANAC58 --------->GLK1(1)       --------->MYB46(2)    <---------ANAC58                    <-- --------ANAC46 <---------GLK1(1) <---------ANAC58          <-----------GT1                      <--- ---ANAC46     ----------->ARR10  <---------ANAC46<---------ARR14(2)                --------->HSFB2a(2) --NtERF2   <-----------HVH21     <---------ANAC58--------->ARR14(2)                <---------HSFB2a(2)   agagtgtgattcggggtgagatccgcgtcggttatgtcttgtttggtgaccggacacgagtttttcttgcctgcaaatagccatttctcgatgctgtctc  15091300                                           ------>ZmHOX2a(2)              <---------MYB52(1)           =====================HOX2a_HOX2a             --------->LBD16              --------->GLK1(1)            <---------HSFB2a(2)      --------->YAB1           <---------LBD16        <----------DOF2        --------->KAN4(2)        ------>ZmHOX2a(2)                                   ================    <------MYB46(1)              ===============================HOX2a_HOX2a          ------>ZmHOX2a(2)    <------MYB83               --------->ARR14(2)        <------ZmHOX2a(1)   --------->GLK1(2)   <---------TOE2(2)           <---------ARR11(3)        ===================================HOX2a_HOX2a   <---------TOE1(2)           <---------ARR14(2)       <----------ID1      <---------GLK1(2) ---------ANAC58               --------->ARR11(3)     --------->CCA1(2)     --------->ARR14(2) ---------ANAC46               <---------AGP1       --------->CCA1(2)       <---------ARR14(2)   <--- ---------ANAC58              <---------CCA1(2)---------->DOF2             <------ZmHOX2a(1)     ---- ---------HVH21          --------->ZAT6  <---------ARR11(3)         --------->MYB52(1)          <---- --------RAV1(1)        <---------YAB1   --------->ARR11(3) ---------->DOF2=================HOX2a_HOX2a   tgtcgtaggttattccggtagagactatcactggatctttcatgatctccaaagagataggacaaaggaagaacggaggaatctcgatctcttcatccat  15091400      --------->LBD16                                 --------->AHL20(1)             <----------DOF2     --------->HSFB2a(2)                              --------->AHL20(2)          --------->ARR11(3)    <---------LBD16                                   <---------AHL20(1)          <---------ARR11(3)   ------>ZmHOX2a(1)                                  <---------AHL20(2)         <---------CCA1(2) =========HOX2a_HOX2a           <----------DOF2       --------->ARR11(3)        <---------AHL20(1) ------ICU4                  <------ZmHOX2a(1)        <---------ARR11(3)        <---------ARR11(3) ----->ATHB51          --------->At4g35610    ----------->TGA1          --------->MYB52(1)--------->TOE2(3) -----MYB52(1)       --------->ARR11(3)       ----------->HVH21---------->DOF2  --------->ARR11(3)   tattcctccggacatatgatgaagatgctgaggactttgacgagaaccctgacgaatatattgatcaaagaagctaagggaatatatctttttcttaata  15091500                                                                       <------MYB83                  <---------HSFB2a(2)                                  <---------ANAC46             <---------ANAC46                                          ----------->GT1             <------MYB46(1)                                           <------MYB46(1)             <---------ANAC58                                         <------MYB46(1)             <------MYB83----------->GT1                            <--------P             <---------ANAC58                                       --------->ALFIN1            --------->MYB59                         *TSS           <-------GAMYB        <---------MYB46(3)                          <------ZmHOX2a(1) <------MYB83---------->DOF2        --------->MYB111(1)                      <------ZmHOX2a(1)<---------MYB46(3)      -----------  <---------REM1(1)   ----------->ARR10      <<<<<<<<<MYB98 ---------->DOF2--------->AHL20(2)   caagttgtagtagttgggtttgggaagatgtgaattggtttgaataagttaggaggaagagagaaaggaggttgggtttaaatataaaggagatgtcaaa  15091600                ----------->GT1               --------->DAG2              ---------->DOF2           --------->AHL20(2)           <---------AHL20(2)          --------->AHL20(2)         <---------YAB1       --------->YAB1       -------->ATHB1                    <---------AHL20(2)       <--------HAHB4       --------->At5g28300       <---------ICU4      ----------->GT1                                                       <---       --------->AHL20(2) <---------ANAC55(2)                                                    ----       --------->ATHB51   --------->ANAC46                                                     ------      --------->ICU4      --------->ANAC58          <-----------GT1                       -----------      <---------YAB1      --------->ANAC55(1)    <---------ICU4      <---------At4g35610  <----------  ------------>CBF        --------->ANAC58  <---------YAB1           --------->At4g35610  =========== >GT1 <---------ATHB51   <---------LBD16 <---------YAB1           ---------->DOF2       ----------->GT1   aattcacaattattaaaaaagtcaaaacacggaaaatacaaatattattagttattacacactctttgtaaagctgtccctataactatatgctaaaaaa  15091700    <---------ARR14(2)    <---------ARR11(3)    <-----------ARR10    --------->ARR14(2)    --------->ARR11(3)           <---------ZAT6    --------->GLK1(2)           <---------YAB1                 <------ZmHOX2a(1)   --------->RVE1(1)         <---------YAB1              --------->MYB52(1) -------ID1            ----------->GT1                  --------->TOE1(2)                <---------At4g35610 ------->GT1         ---------->DOF2       --------------->AGL15               ====================== ---->DOF2       <---------AHL20(2)        <---------------AGL15               <----------DOF2 ---->AGL15      --------->AHL20(2)     <-----------GT1--------->MYB46(3)   ---------->ID1 -----AGL15     --------->AHL20(2) <---------YAB1      <---------MYB52(2)  <-----------GT1          < ==========================================================MADS_MADS      ----------->HVH21         -   agaaaaaatctgcccctatttaataaagtttattagtattatttactcatagaaggaacgaacgaggaacatagatttgaccttttattttcgctgatga  15091800                          <---------ANAC46                    ------->MYC3                    <-----------HVH21                    ------->MYC2                    <-------MYC2                    <-------MYC3                   ====================================bZIP_DOF                   <---------TGA1a                   --------->TGA1a           ==================bZIP_DOF           ---------->DOF2--------->ANAC55(2)      ----------->GT1     <---------ANAC55(2) <---------ANAC46  <---------O2 <------MYB46(1)   --------->ANAC46--------->DAG2 <---------ANAC58  =========================================bZIP_DOF <---------ANAC58  =========================bZIP_DOF <------MYB83      --------->O2  ---------->DOF2                  --------->MYB52(1)          ------- ============================bZIP_DOF            ---------->DOF2<---------MYB52(2)     --------->AHL20(2) ---------MYB46(3) --------->ANAC55(2)      <----------DOF2     --------->MYB46(3) <---------YAB1 -------->MYB55(2) <---------ANAC55(2)   <-----------GT1   ----------->GT1       ----------->GT1   gttgggtgaagaaaaaagaacacgtgagacgtatgaaaaggtttgacttttcaaagagagattgtaacaaacggataagaaaattgtgataaaatataaa  15091900                          <---------MYB46(3)                         --------->ALFIN1                         <---------DEAR3(1)                        <-------GAMYB                        <---------ABI4(1)                      <---------ANAC58                      <---------RAP2.6(2)                      <---------DEAR3(1)                      <---------ANAC46                      <---------DEAR4(1)                      <---------ANAC58                                     <---------GLK1(2)                      <---------DREB2C(2)                               <---------WOX13(1)                     <---------ABI4(1)                                --------->ATHB12                 ------>ZmHOX2a(2)                                  <---------WOX13(1)                <------ZmHOX2a(2)                                <---------YAB1        <------MYB83 <------NtERF2                               --------->AHL20(2)        <------MYB46(1) <------NtERF2                            <---------AHL20(2)        <---------     <---------MYB52(1)<---------MYB46(3)             <----------DOF2<---------AHL20(2)<----------DOF2 --->DOF2   <------NtERF2<---------AtMYB61 <---------ZAT14    <----------DOF2      ------>ZmHOX2a(1)   gagagccatttggtcgcgatcgtggcggtggtgaagacaagagtgtctactgtctgctttgtgtcttttaattgattgattcttcctctctttttacaca  15092000                                                                                     --------->ANAC58                                                                                     --------->ANAC58                                                                                    --------->SPL7                                                       <---------AHL20(2)           --------->SPL1(2)                                                       <---------YAB1             <---------SPL7                                                      --------->AHL20(1)         --------->TOE1(1)                                                      <---------AHL20(1)         --------->TOE2(1)                                                 <---------AHL20(2)             <---------------AtSPL3                                                 --------->AHL20(2)             --------->HSFB2a(2)                         <-----------GT1         --------->AHL20(1)             <---------HSFB2a(2)<-                      <---------ARR11(3) <---------ANAC46                       --------------->AtSPL3     ------>NtERF2    <---------GLK1(2)  <---------ANAC58                      <------------------SPL14    <---------ALFIN1  --------->ARR11(3) ----------->GT1--------->YAB1     <---------DAG2         <-- <-----------GT1    <---------TOE2(3)    <---------ANAC58           <---------ZAT14--------->SPL1(1) --GT1    <---------MYB52(1)     <-----------RAV1(1)  --------->AHL20(2)   <----------DOF2       <---   tttttgccacccgttttgacttaagattttccattttgttgtgtcgtaaaataaaatataatagtgagagtatacaacttttctcgtacggccttgtttc  15092100  Previous    Next  AGI:  At2g35930.1    Description:  U-box domain-containing protein. similar to U-box domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G52450.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO50157.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain U box; (InterPro:IPR003613) Range:  from: 15089934    to: 15091552    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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