Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               <<<<<<<GRF7      <---------TOE2(3)                                                    ------>ZmHOX2a(1)    ---------->DOF2                                                        ----------->HVH21   <---------AHL20(2)                                                <---------YAB1 -------->AHL20(1)                                          --------->AHL20(2)              <-------- ---------AHL20(1)                                     ----------->GT1   <---------ICU4 <---------AHL20(2) ------->AHL20(2)              ---------->DOF2 --------->YAB1   ----------->GT1         <---------YAB1   aatatataaaggaaacacttactactaggcataaaaagtttggaagaaataataagagagaaaaaaatgttataatcctgacattgtttttttattgtta  15082300                                                  <-----------HVH21                                               <---------MYB46(3)                                              <---------AtMYB61                                            <------MYB83                                            <------MYB46(1)                                            <---------ANAC46                                           --------->MYB111(1)                                           <---------AtMYB61                                           --------->MYB111(2)                                           --------->MYB46(2)         <---------YAB1                                           <---------MYB46(3)       --------->ATHB12               --                                           --------->MYB55(2)       --------->YAB1         <------MYB83                                         <---------MYB52(1)        --------->ICU4          <------MYB46(1)                                 <---------ZAT18 --------->bZIP60(1)<--------HAHB4        --------->MYB111(2)                                 --------->WRKY12<---------bZIP60(1)<---------ICU4        --------->MYB46(2) -ZAT6                           --------->WRKY38(1)               <---------ATHB12     <---------MYB52(1)   actcactcttggaataagttgtccaagtctcatagttgactcagtttggtggtgtcacaaattagttccatcattactaatttgctatcagtttggtgat  15082400                                                      <---------ARR11(3)                                                      --------->ARR11(3)                                                     --------->YAB1                                                    <---------ATHB12                                                   <---------TOE2(3)                                            <---------LBD16                                       <---------ARR11(1)                                       <---------ARR14(2)                                       <---------ARR11(3)                                       --------->ARR11(3)                                       --------->ARR14(2)                                       <-----------ARR10                                      --------->GLK1(1)                              ---------->DOF2 --------->LBD16                       ------->TEIL                 ----------->GT1      <---------GLK1(1)                        <---------ANAC46               ------>ZmHOX2a(2)      <---------CCA1(2)            <---------------AGL15            < ----->TEIL  --------->ARR11(3)--------->DAG2 ------>NtERF2        --------------->AGL15  -----------   gtatcaaatactgttgatctagtaatttcacaaaaagcgcatatcttccggctaatgatattagatttactcatatgtgtaatgtgtatgtatggttgaa  15082500                                                        ----------->GT1                         -----             <------MYB46(1)                            <---------ZAT6                    --------->ANAC58             <------MYB83 --------->YAB1              ----------->GT1                     --------->ANAC58            --------->MYB59 <---------CCA1(2)       <---------ZAT14                     ---------->DOF2 ---------REM1(1)  --------->ANAC46                 --------->ZAT14                 ------------>CBF >GT1       <---------TOE2(3)  --------->YAB1--------->ARR11(3)      --------->AHL20(2) <---------ATHB12   agttgaagctaaattaggtttaagtcactcatatcatatgtgtgtgttatcttgtatagtgtaatacaaaattcaatacaaaattttccaataagcaaaa  15082600                                                                                         <---------DAG2                        <-----------GT1               --------->ANAC58                   <----------DOF2                    --------->TOE2(3)             <---------YAB1                 --------->ANAC58          <---------ANAC58                   <---------ICU4 ------->GAMYB        --------->ANAC58   <-----------TGA1 --------->TOE1(3)        --------->YAB1--------->MYB46(3)  <---------ALFIN1   <-----------HVH21<----------DOF2         <-------TEIL ----------->RAV1(1)  <---------REM1(2) ----- ---->YAB1<---------ANAC58           <----------DOF2  --------->ANAC58      *TSS --------->ANAC46   atagtcgtcagtgcgagttcaactttaaactgtttcaaactttatattcattacgaatgcaacagtccctctcttgtttctccacgcttcgctttctcct  15082700                                              ------>NtERF2                                             --------->RRTF1(2)                                             --------->RRTF1(3)                                             --------->RAP2.3(2)                                             --------->RAP2.6(2)                                             --------->DEAR3(1)                                            --------->RAP2.3(1)                              <-------                                           --------->ABI4(1)                                ---------                                           ------>NtERF2                                    <------NtERF2                                          --------->ANAC46                                --------->ALFIN1                                       --------->ANAC46   --------->MYB52(1)              <---------DEAR3(1)                                       <---------ALFIN1  ------>ZmHOX2a(1)                <---------ANAC46                                   <-----------HVH21   --------->bZIP60(2)        <---------DEAR3(1)                                  <----------DOF2     ------>NtERF2            <---------MYB46(3)                              ------>ZmHOX2a(1)<---------MYB52(1)             <---------AtMYB61                           ---------->ID1 --------->DEAR3(1)                  --------->ALFIN1                     <---------At4g35610 --------->DEAR3(2)       ------>ZmHOX2a(1) <------NtERF2 --- ->ZmHOX2a(1)        --------->At4g35610 --------->MYB46(3)      <---------MYB59  <---------MYB46(3)   tccattttcttccaaactctctccgcttcgtcctctctttcacaccgccgctatgcctcctcacggtcctaattctcaaggtggtcgtcgaggcggaggt  15082800                                         <---------DEAR4(1)                                         <---------DREB2C(2)                                    <---------ANAC58                                    <---------MYB46(3)                                    --------->MYB52(2)                                    <---------ANAC58                                   --------->ALFIN1                                  <-----------HVH21                                  <-------GAMYB                                 <---------DEAR3(2)                                 <---------MYB46(3)                                <---------DEAR3(1)                               --------->ATERF1(1)                               <------NtERF2                               <---------At4g35610                               --------->At4g35610                              <---------RAP2.6(1)                              <---------RRTF1(1)                              <---------ORA47(2)                              <---------RAP2.3(1)                              <---------DEAR4(2)                              <---------ATERF1(1)                              ------>NtERF2                             <---------RAP2.6(2)                             <---------ATERF1(2)                             --------->ATERF1(2)                             <---------DEAR3(1)                             --------->DEAR3(1)                             <---------RAP2.3(2)           <------NtERF2                             <---------RRTF1(2)        ------>NtERF2                             --------->ALFIN1          <------NtERF2                             <---------RAP2.3(3)       --------->ATERF1(1)                             <---------RRTF1(3)       ------>NtERF2                             <---------ANAC46         <---------RAP2.3(1)                            --------->At4g35610      <---------RAP2.3(3)                            <---------ABI4(1)        <---------RAP2.3(2)                            <---------At4g35610      <---------ANAC46                            --------->ATERF1(1)      <---------ANAC58                            <------NtERF2<---------DEAR3(1)--------->ALFIN1                            --------->DEAR4(2)       <---------RAP2.6(2)                            --------->DREB2C(1)      <---------ATERF1(2)                           <---------ATERF1(1)       --------->ATERF1(2)                           <---------RRTF1(1)        <---------ANAC58                           <---------RAP2.6(1)       <---------DEAR3(1)                           <---------DEAR4(2)        <---------DREB2C(2)                           <---------ERF1<---------RAP2.6(2)                           <---------ORA47(2)        --------->ATERF1(1)                          --------->DEAR3(1)        --------->RAP2.6(3)                          <---------RAP2.3(3)       <------NtERF2                          <---------RRTF1(2)        --------->ATERF1(1)                          <---------RRTF1(3)       <---------ATERF1(1)                          <---------RAP2.3(2)      <---------ERF1                          <---------RAP2.6(2)     <---------DEAR3(1)                          <---------DEAR3(1)      --------->ALFIN1                          <---------ANAC46      <---------MYB46(3)                          <---------ATERF1(2)  --------->ALFIN1                          --------->ATERF1(2)--------->MYB55(2)                          --------->ALFIN1   <---------MYB46(3)                         <---------ABI4(1) <------NtERF2--------->ATERF1(1)                  <-------                         ------>NtERF2   <---------ANAC46 --------->LBD16              --------->ALFIN1                         <------NtERF2  <---------ABI4(1) <---------LBD16             --------->REM1(2)                         --------->RAP2.3(1)<---------DEAR3(1)                       <---------ANAC46                        <---------ATERF1(1)<-------GAMYB<---------LBD16              --------->ALFIN1                        <---------DEAR4(2)<---------MYB46(3)                       ------>ZmHOX2a(1)              --------->ALFIN1<---------ERF1<---------AtMYB61                    ------>ZmHOX2a(2)         <---------DEAR3(1)<---------RAP2.3(1) <---------AtMYB61                <------ZmHOX2a(2)         <---------MYB46(3)------>NtERF2<------NtERF2<---------RRTF1(2)        --------->ARR14(2)        --------->SPL7 <---------DEAR3(1)<---------ANAC58 <------NtERF2        --------->ARR11(3)       <---------MYB52(1)--------->ATERF1(1)--------->ALFIN1                   <---------ARR14(2)    <---------LBD16   <---------LBD16 --------->ALFIN1<---------SPL7          <---------PCF2 --------   ------>ZmHOX2a(1)  --------->ATERF1(1)<---------ANAC58<---------DEAR3(1)  ----------->ARR10 --AtMYB61  <---------ANAC46--------->RAP2.3(1)<---------DEAR3(1)        <---------MYB46(3)  -------- >ATERF1(1)<------NtERF2<---------RAP2.3(1)<---------ABI4(1)            --------->ALFIN1--------->REM1(2) ------>KAN4(2)   <---------SPL7<---------AtMYB61--------->ATERF1(1)    <---------AtMYB61    <-------   cattcctccggtcgtcgtggtggacgcggcggcggcggtcgtggcggtggtggtggcggccggggggaacagcgatggtgggatcctgtgtggagagctg  15082900                 --------->ZAT2                 <---------ZAT2          --------->At4g35610          <------NtERF2         --------->ANAC58         --------->ANAC58         ------>NtERF2      ------>NtERF2     --------->ANAC46<---------TOE2(3)                  <-------TEIL      --------->ATHB12 --At4g35610     --------->At4g35610            --------->GLK1(2)       <---------TOE1(3)   <-------- ->At4g35610----------->RAV1(1)                <---------ARR14(2)       <---------TOE2(3)<---------ANAC55(2) ->ZAT2  --------->ANAC46       <-------TEIL   --------->ARR14(2)      <-----------GT1   --------->ANAC55(2) --ZAT2 --------->ATERF1(2)<---------WOX13(1)  <---------GLK1(2)     --------->AHL20(2) <-------TEIL   agcgtttgcgccagcaacaagctgaggtaattgatacattgttcttgtagattctgagttcattacttcaatttaacgattagacattgatacataattt  15083000                    --------->ICU4                    <---------YAB1                  --------->YAB1<---------At4g35610    --------->At4g35610       <-----------RAV1(2)    <---------At4g35610 <---------AHL20(2)  <-----------RAV1(2)<---------ICU4                                                        <------ZmHOX2a(1) -ICU4           <---------ZAT6 --------->At4g35610   --------->ATHB12                  <------ZmHOX2a(1)   cgaatcagatgatgaagtagtcataatttatctcagatggaagtacttgatgagaatgaatggtggaacaagattgagcaatggaaaacaggaggagaac  15083100                                     --------->At4g35610                                     <---------At4g35610                                  <------ZmHOX2a(2)                                 <---------ARR14(2)                                 <---------ARR11(3)                                 --------->ARR11(3)                                 --------->ARR14(2)                                        --------->ARR14(2)                                <---------GLK1(1)                       <----------DOF2    <---------ARR11(3)                               ----------->ARR10          <----------DOF2   <---------ANAC58                           --------->LBD16               <---------ANAC58   <---------ANAC58              ----------->GT1--------->REM1(2)           <---------ANAC58   <---------ANAC46        -              --------->YAB1--------->ALFIN1 <---------DAG2     <---------At4g35610        --------->ARR11(3) --------->CCA1(2)        <---------ANAC46   <----------DOF2    --------->At4g35610       <---------CCA1(2)   aagagatgctaattaagcgtaattttagccgtggagatcagcaaacactttctgatatggctttgcagatgggtctttacttgtaagtctctatatcttc  15083200  Previous    Next  AGI:  At2g35920.1    Description:  helicase domain-containing protein. similar to ATP binding / helicase/ nucleic acid binding [Arabidopsis thaliana] (TAIR:AT5G04895.1); similar to ATP binding / helicase/ nucleic acid binding [Arabidopsis thaliana] (TAIR:AT2G01130.1); similar to helicase domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G48650.1); similar to hypothetical protein OsJ_030604 [Oryza sativa (japonica cultivar-group)] (GB:EAZ16395.1); similar to hypothetical protein OsI_032853 [Oryza sativa (indica cultivar-group)] (GB:EAY78894.1); similar to putative ATP-dependent RNA helicase [Oryza sativa] (GB:AAG16852.1); contains InterPro domain Protein of unknown func Range:  from: 15082676    to: 15087891    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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