Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  --------->ARR14(2)                                                                <---------ARR14(2)    ------>NtERF2                                                               <---------GLK1(1)<---------ANAC58                                                       --------->ANAC55(2)      <---------ANAC58                                                       <---------ANAC58        <---------DEAR3(1)                                 <---------ARR14(2)    <---------ANAC46      <---------SPL7                             <------ZmHOX2a(1)         <---------ANAC55(2)  --------->ETT(2)                 <---------MYB46(3)                    <---------ANAC55(1)  <---------ETT(2)                --------->ALFIN1<------ZmHOX2a(1)      <---------ANAC58     <---------ANAC58       <-             <---------AtMYB61  --------->ATERF1(1) --------->ARR14(2)      <---------ANAC58   <-----          --------->ALFIN1 --------->ALFIN1         --------->GLK1(2)    <-----------RAV1(1)  <------    --------->ALFIN1      <------ZmHOX2a(1)         <---------ARR14(2) ------>ZmHOX2a(1) <------ZmHOX2a(1) -------TaNAC69(2)    --------->ICU4               <---------GLK1(2)------>ZmHOX2a(1)<---------ANAC46   tatgaggtgagggtgatggtggtgatgaggaggaggaccccgatggagacaccgattccgtatcgaaatcctcctatgtcgtccgtgccgaggaggccgt  15080800                            <--------P                          --------->MYB55(2)                          --------->MYB52(2)                          --------->MYB111(2)                          <---------MYB46(3)                         <---------AtMYB61                         --------->ALFIN1                        <-------GAMYB                        <------NtERF2                       <---------MYB46(3)                      <---------DREB2C(2)                      <---------ANAC46                      <---------RAP2.6(2)                      <---------DEAR3(1)                      <---------ANAC58                      <---------ANAC58                      <---------DEAR4(1)                     --------->ATERF1(1)                     <------NtERF2                <---------DEAR3(1)                   <<<<<<<<<<MYB80               <---------ORA47(1)                   <------MYB83             ----------->HVH21                      <------MYB46(1)             <---------SPL7<-------GAMYB           <---------AtMYB61            --------->TOE1(1)                      --------->MYB59                                  -     --------->LBD16------>NtERF2               <---------ARR14(2)                                 --   <---------LBD16 <---------DEAR3(1)          <------NtERF2                                       <-   --------->SPL7  --------->ALFIN1           --------->LBD16                                 ------- <---------SPL7--------->SPL7                <---------ANAC46                                <------ZmHOX2a(1) --------------AtSPL3<---------ABI4(1)  <---------AtLEC2                                    --------- --GAMYB   --------->HSFB2a(2)<------MYB46(1)<---------ANAC58                       <------ZmHOX2a(1) ---MYB46(3)--------->TOE2(1) <------MYB83   <---------ANAC58        <---------AHL20(2)<------ZmHOX2a(1)   tgtagtccggcatctcggacggtggcggtggttggaaattgttcatggcgggtttggtttgatggttttgtttaatgggtttgggaggaggaagaggaga  15080900                                                                           --------->ANAC46                    <------NtERF2                                       <---------WRKY12                    <---------------------WRI1                          <---------WRKY38(1) -------->MYB52(1)  <---------At4g35610                            ---------->DOF2 ------->ICU4     <---------WRKY38(1)                            --------->YAB1 --------ATHB51   <---------WRKY45                              <---------YAB1                   ---- ---->GT1         <---------WRKY12                  --------->ARR11(3)  <---------WRKY45        ----- -->GT1         <-----------HVH21      ----------->GT1      <-------GAMYB<---------DOF5.7(2)<--------   aataatggagaggtttttggtcagcgatttgatataagacaatgtaaattgaagcatcttggggttatcaaaagtcaacgctaagagagagagagagaca  15081000                                                                       <-------GAMYB                    <---------TOE2(3)             --------->ICU4      <---------MYB46(3)             ------->MYC3                    --------->ANAC58         <------MYB83             <-------MYC3                    --------->ANAC58<---------ANAC58   <---------ARR11(3)         <-------TEIL                   --------->ANAC58     <---------ANAC58   <---------AHL20(1)     --------->ARR14(2)               ---------->DOF2        <---------ANAC46   --------->ARR11(3)     <---------ARR14(2)         <---------ANAC58 --------->ANAC58     ----------->GT1    <------ZmHOX2a(1) <------ZmHOX2a(1) --------->ANAC58<---------ANAC58        --------->AHL20(1) ----->MYB52(1)    --------->YAB1  <-----------HVH21    <---------ANAC58     --------->AHL20(2) ----->DOF2------->TEIL         <---------ANAC58 --------->ANAC58     <------MYB46(1)    <<<<<<<<<EIN3 --ID1--------->GLK1(1)     ---------->DOF2---------->DOF2----------->HVH21  <---------AHL20(2)   aagggaggaaatgcatgtgaatgaggataagaaagcttgtcaaagcaaagcaagaattgtgtgacttgtggatggttaaaaaaatattcaatgtataaat  15081100                                                    <-----------GT1                                               <---------AHL20(1)                                               --------->AHL20(1)                                               <---------AHL20(2)                                               --------->AHL20(2)                                               <---------ARR11(3)                                               --------->ARR11(3)                                              --------->AHL20(2)                                          --------->AHL20(2)                       ---------->DOF2                                          <---------AHL20(2)*TSS  <---------MYB52(1)        ---------             ----------->GT1          <---------CCA1(2)    --------->AHL20(2)   --------->YAB1    ---   tttctaatattgtattggtaatactgtaatagtataacgcatatataaatatattgacccattaattcgttgtttatttcaaacataaaacacttagttg  15081200                                    ----------->HVH21                                   <-----------HVH21                                  --------->ALFIN1                                    <---------TOE1(3)                                 --------->TOE1(2)                         ------>NtERF2                                <---------ANAC58                          <---------PCF5             <-------TEIL       <---------ANAC58                          <---------PCF2            --------->CCA1(2)   <---------ANAC46             <------ZmHOX2a(1)        <---------TOE2(3)      <------------CBF         <---------TOE2(3)   --------->CCA1(2)     --------->ATERF1(1) <------------CBF         ------->TEIL          <---------TOE2(3)       <---------ATERF1(1) >MYB52(2) <---------ARR14(2) <-----------GT1   <---------YAB1         --------->ALFIN1 --------->CBF         <---------ATHB12<---------ANAC46    <---------TOE2(3)          <---------YAB1   cacaattgaattggatacagggctaatgaatttaacgtgtgacatgtattaagatttgatttaggaatgtagggaggggccagtggctaagattagagaa  15081300                           --------------->AtSPL8                      <---------WRKY12                     <-------TEIL                      <---------WRKY38(1)                  ------->TEIL                      <---------WRKY45<-----------GT1  <---------------AtSPL8                       <    <---------At4g35610 <---------TOE2(3)              <---------------AtSPL3                     ---    --------->At4g35610<---------DOF5.7(2)       ---------->ID1            <----------DOF2 <---------AHL20(2)   ggtttacgctgaattagtttgaagtcaacgttgtacttatatactaatcttgttgtttatgtacgtttagttatctcctttattcaggcttatttaagtc  15081400            --------->ANAC58            --------->ANAC46            --------->ANAC58        <---------ANAC55(2)    <-----------HVH21                                                  --------->YAB1   <---------bZIP60(1)                              <---------ZAT6  <---------ZAT6   --------->bZIP60(1)                    ---------->DOF2     <---------YAB1 --------->YAB1                       <----------DOF2      <---------------AGL15 <---------ICU4                      <---------ANAC46      ========================================== ---------ATHB12                     <---------ANAC58      --------------->AGL15           <---------GLK1(1) ------>WOX13(1)                     <---------ANAC58     --------->TOE2(3)     <---------AHL20(2)   caatcatgtcacctaagcaacgtttagtttccttcacttgcttttaaagtcgcagtgttatcttattttagtattagaatatttaaaactttgaaatctc  15081500                                                                 <---------YAB1 --------->AHL20(1)                                               --------->ANAC58  <---------AHL20(2)                                               --------->ANAC58 <---------AHL20(1)                                       --------->DAG2 --------->AHL20(1)        --------->AHL20(2)                                      ---------->DOF2 <---------AHL20(2) ----------->GT1                                    --------------->AGL15       --------->AHL20(1)                                    ------>ZmHOX2a(1) --------->AHL20(2) <------MYB46(1)                                    <---------------AGL15       --------->AHL20(2)                  ---------->DOF2  ----------------->AGL2  --------->AHL20(2)   <---------AHL20(2)              <---------YAB1       <-----------------AGL3  --------->AHL20(1)  --------->AHL20(2) ---             --------->AHL20(2)  <---------------AGL15<---------AHL20(1) <------MYB83           <---- ================================================MADS_MADS <---------AHL20(2)  <---------AHL20(2) <--   tccatattagaagattaatataaagttttgtttttctcctaaaagtggcaagacaataaaataaaatataattgtaggtaaataatttgtatatactagg  15081600                                                     --------->AHL20(1)                                                     <---------AHL20(2)                                                     <---------AHL20(1)                         -----                                                    --------->YAB1                             ------                     <---------ANAC46               --------->AHL20(2)                        -------                     <---------TGA1a            --------->AHL20(2)                        --------->ANAC55(2)         <-----------GT1        <---------TOE2(3)   <---------AHL20(2)     <------ZmHOX2a(1) -------- ------>GLK1(1)      <---------O2               <---------AHL20(2)         ----------->GT1--------->ANAC46 --ZmHOX2a(1)        <---------ANAC58          --------->AHL20(2)    <---------YAB1  --------->WOX13(1) -------GLK1(1)      <---------ANAC58       <---------ANAC55(2)     -------->P     <---------ATHB12   aaatccaaatttaaccaattgagtcgtgggcattaacatttgtattacataaaattatattttggcaaactaccataggataaaaatcattcacttaacg  15081700  Previous    Next  AGI:  At2g35910.1    Description:  zinc finger (C3HC4-type RING finger) family protein. Identical to RING-H2 finger protein ATL2I (ATL2I) [Arabidopsis Thaliana] (GB:Q8RX29;GB:Q9SJ59); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G06490.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN70851.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 15080011    to: 15081160    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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