Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                <---------MYB52(1)         --------->ARR14(2)         <---------ARR14(2)    <------ZmHOX2a(2)                                               ----------->RAV1(2)   <---------ARR14(2)                                        <---------MYB46(3)   --------->AGP1                                      --------->ANAC58                   -----------   --------->ARR14(2)                                  --------->ANAC58         <------ZmHOX2a(1)  --------->At4g35610  <-----------------AGL2         ------>NtERF2 <---------At4g35610<---------ICU4 ------ZAT2  --------->TOE2(3)         ---------->ID1--------->DEAR3(1)     ------>ZmHOX2a(1) ----->At4g35610       <-----------------AGL3       --------->ATERF1(1)   =============HOX2a_HOX2a ------At4g35610   --------->YAB1------->TEIL       --------->MYB46(3)    ------>ZmHOX2a(2)   gctcagatccaaatcccttaatcaaactaaaaatggaccttgttgttttgagtagccacccatttgttccatctgatcctaaggactaaacattgtaaca  15072500                                                                                                    <                                                                                                 ----                      <---------AHL20(2)                                                        <----                     <---------YAB1                                --------->YAB1          -------->P                <---------DAG2               --------->YAB1      ------>MYB46(1)           ------>MYB83                <----------DOF2             <------ZmHOX2a(2)    ------>MYB83              ------>MYB46(1)            <---------ATHB12        --------->ANAC58          <---------ANAC55(2)         --------->MYB52(1)          --------->WOX13(1)        --------->ANAC58     --------->YAB1     --------->YAB1--------->MYB55(1)          --------->YAB1            --------->ANAC46     <---------ICU4    <-------TEIL  --------->AtMYB61 >GT1    --------->MYB46(3)  ----------->RAV1(1)  ------->TEIL--------->ANAC55(2)       --------->MYB46(3)   tagcaatgtcaacaatcacttttattatttgcaacaaaacgctacgatcatcaacctagtcatcacctatcaccatattcataaaaacaaaccaaccgtt  15072600                                                                         --------->ANAC58                                                                         --------->ANAC58                                                                       ---------->DOF2                                                                     <---------MYB52(2)                                                                  --------->MYB46(3)        --------- --------->ICU4                              ------>MYB46(1)     XXXXXXXXXXXXXXXXXXX>MIR773B* ---------TOE2(3)                            ------>MYB83------>ZmHOX2a(1)                  <-------- ----->AHL20(2)                            --------->AtMYB61<---------ETT(2)      ------>MYB46(1) ------DOF2   ---------->DOF2              <---------MYB59  --------->ETT(2)      ------>MYB83-------   ttaatgtttaaaattcgaaagctctgattttgaaaacagattgaaccaaaccattgttcctgtagacaacaactaaagcaaacccactagtcaaaatcta  15072700                                                                                    <---------DAG2                                                                                    --------->TOE1(3)                                                                                    --------->TOE2(3)                                                                                    <---------MYB59                                                                         --------->LBD16                           ------>MYB46(1)                              <---------------AGL15                           ------>MYB83                                 --------------->AGL15                         <---------MYB59                               ----------------->AGL3        --------->ANAC58 --------->AtMYB61                    ----------->GT1     ------->TEIL        --------->ANAC58 ------->GAMYB                        --------->ANAC58--------------->AtSPL8 >GLK1(2)               --------->MYB46(3)                    --------->ANAC58<---------------AtSPL3 -ARR11(3)             -------->P                           ---------->DOF2   --------->DAG2       <- -->TOE2(3)           --------->WOX13(1)      ---------->DOF2--------->DAG2  ---------->DOF2       <-   aatctgaaacaagacaagtagaatcaaccaaacaagtcgaaactaagacaaagtgaatgaagaaaagcaaaattccacaaaaagtaccttatcagtcgat  15072800                                                  --------->ANAC46                                               <------ZmHOX2a(2)              <---------ARR14(2)              --------->ARR11(3)              ---------->TaMYB80              <---------ARR11(3)           <---------ANAC46                <---------TOE1(2)       ---------->DOF2                   <xxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                     <----   <----------ID1                      <-------TEIL                                             ----- ---------->DOF2    <---------DAG2  <---------HSFC1(2)                             --------->DAG2 --------TOE2(3)    <----------DOF2 --------->HSFC1(2)               ---------->DOF2         <------- --------YAB1 --------->ARR14(2) ---------->DOF2  --------->ZAT6 ---------->DOF2  ---------->DOF2   taagaaagacaaagcgtatatgctttttctctactaaaagcttcgtaagatcacactactggcaagagaaagaaagagagaagaaaaagcgaagagcgac  15072900                                                               ---------->DOF2      <---------REM1(1)                                       <---------WRKY12           <---------ICU4     --------------->AtSPL8                                 --------->TOE2(3)         --------->YAB1     <---------------AtSPL3                        <---------DAG2                ------------>CBF   < -----O2          --------->ALFIN1       ---------->DOF2    <-----------HVH21  <---------ETT(2)  ---- ---->O2 ------->TEIL               ----------->GT1<----------DOF2          <---------REM1(1)    ---- ---ID1 <-----------GT1          ---------->DOF2 *TSS      --------->ANAC46--------->ARR11(3)  <-----   gagtcttgttgtacctctctgtgtgggaatgagagcaaaggaaaaaagatgggctttttcaacgtcaaaggagagaagatgtagacaataaccattacca  15073000                                      <---------DAG2                                  --------->WRKY12           --------->DEAR3(1)     ----------->HVH21                                     --------->YAB1        <---------ALFIN1          --------->WRKY38(1)                               <---------YAB1    --------->LBD16          <---------ARR11(3)                                    <---------AHL20(2)   --------->HSFB2a(2)       --------->ARR11(3)                                    --------->AHL20(2)   <---------HSFB2a(2)      <------MYB46(1)                                       --------->YAB1  <---------LBD16        <---------MYB52(1)      --------->ZAT6                   <---------AHL20(2) --------->MYB52(1)      <<<<<<<<<MYB98<----------DOF2                        --------->AHL20(2) -----------GT1     <----------DOF2 ---------->ID1                            --------->AHL20(1) -->MYB46(1)  <---------ALFIN1  <----------DOF2  <-----------GT1              <---------AHL20(2) -->MYB83 --------->ANAC58  <------MYB83       <-----------GT1               --------->AHL20(2)   <-- ----MYB59--------->ANAC58 --------->MYB59    <-----------GT1         ------->TEIL--------->AHL20(2)   aattaccggaacaccccctcttcttttgttaggtctttgaccttttttttatcactctctcgctcactaatgaactcaaattaattaaaattataagaca  15073100                                               ---------->DOF2                                           <---------ANAC55(2)                 --------->ANAC58       <---------GLK1(2)                                    --------               <---------ALFIN1         <---------ARR11(3)                                  <--------            <-----------GT1    <---------GLK1(2)                        <--------P <---------TOE2(3)          --------->GLK1(1)    <---------ARR14(2)                    --------->MYB59<-----------RAV1(1)          <---------GLK1(1)    --------->ARR14(2)                    <---------TOE1(3)     --------->ANAC58   <---------ICU4--------->ANAC58       <---------ARR14(2)           <---------AtMYB61     --------->ANAC58  <---------ATHB12     --------->YAB1   --------->ARR14(2)           <---------TOE2(3)    --------->WOX13(1) -------MYB52(2) --------->ANAC46       --------->ARR11(3)      <---------ATHB12 <---------AHL20(2)   actaatcagtagatttcccaccctataatcacagatactcaagatacttaaaagtctaaactcccaatgtttaggttgctaaatttatgttgcaatcaac  15073200                                                                        <---------TOE2(3)                                                                   -------->HAHB4                                                                   --------->ATHB12                                                  --------->At5g28300<---------WOX13(1)       -------            --------->YAB1                       ----------->GT1  <---------ATHB12           --------     ----------->GT1                             --------->YAB1   --------->ICU4             <-------MYC3  --------->DAG2                         ----------->GT1          <---------YAB1             ------->MYC3 ---------->DOF2 ----------->GT1     --------->DAG2         --------->ANAC58                 ------->MYC2 ->YAB1    <---------ATHB12         ---------->DOF2       ---------->DOF2 <------ZmHOX2a(1)  <-------MYC2 -ATHB12   <---------ATHB51     <---------ZAT6--------->YAB1--------->ANAC58     --------->ALFIN1 <--   aaaaaaagggtcaataatgtggtcaaaagagtgagtgataaaggggtataatggtaaatagaaagcaaatgattgaggaagaagtgtttggagaacgtgg  15073300                                                                        --------->TCP11(2)                                                                        <---------PCF2                                                                        --------->TCP16(1)                                                                        --------->PCF5                                                                       <---------TCP16(2)                                                                      --------->WRKY38(1)                                                                  <-------MYC3                                                                  ------->MYC3                                                                 <---------ANAC58                                                                 <---------ANAC46                                                                 --------->O2                                                                 <---------O2                                                                 <---------ANAC58                                                                 ================================MYC_MYB                                                                 <---------TGA1a                                                                ------>NtERF2                                                                <------NtERF2                       <                                                                --------->LBD16                     <                                                               --------->DEAR3(1)                   <                                                              <------NtERF2                         -                                                           --------->MYB46(3)                       <                                                           <---------LBD16                          <                                                   --------->bZIP60(2)--------->ZAT18               <                                                   --------->ANAC58   <---------ZAT18               <                                                   --------->ANAC46  --------->ALFIN1               -                                            --------->ANAC58 <---------ATERF1(1)                    -                                   <---------MYB52(2)    --------->ARR14(2)                         <                               ---------->DOF2     --------->ANAC58 --------->REM1(2)             <--                               ============================================bZIP_DOF              ----                             <---------MYB52(1)  <---------ALFIN1--------->TGA1a                 ----                            ===============================================MYC_MYB              <----                            <-------GAMYB =================================bZIP_DOF             <----                            <-----------HVH21 --------->PCF2 ------>NtERF2                     <-----                           --------->ANAC46 --------->ANAC58--------->ANAC46              <---------MYB52(1) -->ALFIN1             <---------GLK1(1)  ---------->DOF2==================MYC_MYB       ============ ->TOE1(2)             --------->GLK1(1)--------->YAB1   --------->MYB52(1)              <-------GAMYB --------ARF1   <------ZmHOX2a(1) <---------At4g35610    -------->P--------->ALFIN1    --------->SPL7   gagagaagaagagagagaggagagggtctccgttacagcgaaccataagccccacgacatacccgccgcgtgtggaccccattacttcgtccgttattgc  15073400  Previous    Next  AGI:  At2g35880.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G32330.3); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G32330.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G32330.1); similar to Os06g0606800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058026.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44238.1); similar to Os11g0571900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001068122.1); contains InterPro domain Targeting for Xklp2 (InterPro:IPR009675) Range:  from: 15070067    to: 15072949    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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