Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            --------->ALFIN1   ---------->DOF2 ----------GT1 -->AHL20(1)                                                                                        - ---AHL20(1)                                   --------->YAB1                                     <-- -->AHL20(2)                              <---------ATHB12                       --------->AtLEC2 --- ---AHL20(2)                            --------->WOX13(1)          <---------AHL20(2)            ---   ttaacaaaagaagtggccacgaagaatggaattttgttgtatcaatgaagcataagtagtaccatagtattttaaaattcgaaatgcaaatcaaatttca  15066400                                                                    <---------YAB1                                                                  <-----------GT1                                                         <---------ICU4                            --------->YAB1               --------->ATHB51                      <-----                     ----------->GT1                     --------->ATHB12                     ------>ZmHOX2a(2)             ----------->GT1<---------ICU4               <--------ATHB1             <---------TOE2(2)    ----------->RAV1(1)    <---------YAB1                -------->HAHB4             <---------TOE1(2)   <---------bZIP60(1)     <---------ATHB12             <---------YAB1              --------->SPL7   --------->bZIP60(1)   --------->WOX13(1)             --------->ICU4            <---------SPL7 ---------->HVH21 --------->YAB1                        <---------ATHB51         <---------ANAC58 -------O2   <---------ANAC46                      <---------At4g35610           <---------ANAC58<--- ------>O2<-----------RAV1(1)            <---------ZAT18<---------ATHB12        --------------->AtSPL3 ------>ANAC46   <---------YAB1----------->GT1     --------->At4g35610          <---------------AtSPL3   acgtgacaacatatgttgtataatagttaatcatagtaaatagcacacattgcagctaataattggatttacaattgtttgagtcgtacgttttgatctg  15066500                                                                             ========================                                                                             <---------TGA1a                                                                             <---------O2                                                                             --------->TGA1a                                                                   <---------At4g35610                           <---------HSFB2a(1)                     --------->At4g35610          --------->AHL20(2)                                   <-----------HVH21      --------->ANAC46     --------->HSFB2a(1)          --------->ETT(2)     --------->O2      --------->ANAC58     <---------HSFC1(2)           <---------ETT(2)--------->ANAC58      --------->ANAC58     --------->HSFC1(2)        --------->GLK1(1)  --------->bZIP60(2) ------RAV1(1)           ---------->DOF2            --------->ARR11(3)  --------->ANAC46 ------MYB52(1)  ---------->DOF2                    <---------ARR14(2)  --------->ANAC58   ttgtttacaagaaaaaatacaaagatggaaagttctaacttcaagtgaagttcagatatcgaccgagtcagaacacgacacgaggctcgaagacagaggc  15066600                                                                                                -----                                                                                          --------->ANAC55(1)                                                                                          --------->ANAC46                                                                                     --------->ANAC58                                                                                     --------->ANAC46                        ----------->GT1                                              --------->ANAC58                        --------->ANAC58                            --------->ANAC58 ================                    --------->ANAC58                                --------->ANAC58 ----------->HVH21              ----------->RAV1(1)                            --------->MYB59         --------->O2         <---------MYB46(3)                             --------->LBD16              --------->bZIP60(2)  --------->ZAT14   --------->ANAC58                  <-----------------AGL1    ----------->HVH21  <---------ZAT14------->GAMYB<-----------GT1         <------NtERF2 --------->ANAC46 --------->TGA1a  <---------At4g35610   --------->ANAC58            <---------ARR14(2)   --------->ANAC58 --------->ANAC55(2) ========================MYC_MYB <---------DAG2     --------->ARR14(2)   --------->ANAC58 <---------ANAC55(2)   atagtgctgagttgttcaacagaagcaagtaaaaaccttttgtctgagagagaggctccgagttaggcataagccaaacaacttgacacgacacataacc  15066700                                                                                <---------AHL20(2)                                                                                --------->AHL20(2)                                                                               --------->AHL20(2)                         <-----------GT1                              --------->ANAC58                    <----------DOF2            --------->AHL20(2)     --------->ANAC58                    <---------DAG2             <---------AHL20(2)     --------->ANAC46               <---------MYB59       --------->AHL20(2)              ------>MYB83         --------->REM1(2)       --------------->AGL15               ------>MYB46(1)      <---------ANAC46  <-----------GT1        --------->AHL20(1)   <---------ALFIN1            ----- <---------ANAC58------>MYB83    <---------------AGL15             <---------MYB55(2)       --------- <---------ANAC58------>MYB46(1)----------------->AG               --------->MYB46(3)    <---------TOE2(3) ---->TOE2(3) --------->ANAC46  ----------------->AGL3            --------->ANAC58    --------->AHL20(2) ==============================bZIP_DOF   --------->AHL20(2)      --------->ANAC58    <---------AHL20(2)   tttgcttctcgtgtagacccaactttttacccttaccaaaaatataaaataaaatatgcaaaaaacacacccactcaaaaattaaaattttaatgaaaga  15066800                                                                                                   --                                                                                                  <--                                                                      ------>MYB46(1)           <----                                                                      ------>MYB83             ------                                                                    <---------MYB46(2)         <-----                                                                    --------->AtMYB61          ------                                                                    --------->MYB46(3)         ------                                                                    <---------MYB111(1)        <-----                               <----------DOF2                     --------->ANAC58            <-----                        --------->GLK1(2)                          --------->ANAC46            ------                       <---------GLK1(2)               --------->ANAC58                        ------                    --------->YAB1                     --------->ANAC58                        ------                   --------->At4g35610                 --------->ANAC46       <-----------GT1 ------- ----->DOF2     --------->At4g35610       *TSS------>ZmHOX2a(1)    --------->ANAC58    --------->ATHB12 ->DOF2    --------->ANAC46   <------------------------ANAC81    <----------ID1  <----------DOF2-----   aagaagaaacttcacatcagcatcagaatctctctttctctctctctccttcttcacaagcaaaaaaacaccaaaccatttttctttcttcattgtgccg  15066900    <----------DOF2 ------->HSFC1(2) -------ALFIN1 -----RAP2.6(3) --->ATERF1(2) ----ATERF1(2)                         <---------GLK1(1) ---------->DOF2                       <----- --->At1g77200                 ------>NtERF2          ----------->RAV1(1)              --------->AtMYB61 --->DEAR3(1)                 --------->ANAC46       <------NtERF2                  --------->DEAR3(1) ----ETT(1)                   --------->RAP2.6(2)   <---------RAP2.3(1)             --------->AtMYB61 ----bZIP60(1)                ------->GAMYB   ------>ZmHOX2a(1)                     <---------ALFIN1 ----->HVH21                  --------->DEAR3(1)    ------>NtERF2                  --------->MYB46(3) --->bZIP60(1)                --------->DREB2C(2)  <---------bZIP60(1)           --------->ANAC46 --->RAP2.3(3)               --------->MYB46(3)    --------->PCF2               ------>ZmHOX2a(1)  -- -->DEAR3(2)                <---------ATERF1(1)    --------->bZIP60(1)    ------>ZmHOX2a(1)    <----- ->NtERF2 <---------ALFIN1 <---------ALFIN1------>ZmHOX2a(1)           ------>ZmHOX2a(1)       <-----   acacttctttcccctctctctctctctctccaccgccatggattcctcctatggcgccacaaagttccttctcctcctcttcctcaccacctccattgcg  15067000                                                                ------>ZmHOX2a(1)                                                                --------->LBD16                                                                --------->HSFB2a(2)                            <-----------HVH21                 ----------->RAV1(2)  --------->ZAT2                          --------->LBD16                --------->At4g35610      --------->AGP1        --------->ANAC46 <---------ANAC46                <---------At4g35610   --------->ANAC46 ----RAP2.6(2)          <---------LBD16                <---------CCA1(2)    <---------REM1(2) ------->RAP2.6(2)     --------->MYB52(1)            --------->TOE1(1)      --------->ZAT14 ----ANAC58   --------->MYB46(3)                     --------->TOE2(1)      <---------ZAT14<---------ARR14(2) ----ANAC58   <---------MYB52(2)                    ------>ZmHOX2a(1)   --------->ZAT6 --------->At4g35610   accgcattacccgataacaaaccagtaccgggtcaaataaactcaaactcagtcctcgtagctctcctggactctcactacacagagctagcagaactag  15067100                                                                               <---------ANAC58                                                                               <---------ANAC46                                                                       --------->MYB52(1)                                                                    --------->AtLEC2                                                                    --------->ANAC55(1)                                                                    --------->ANAC46                    --------->ARR14(2)        --------->ANAC46      --------->ANAC58                -            ------>ZmHOX2a(1)         ----------->GT1               --------->ANAC58  --------->ANAC58      <---------ARR11(3)              <------MYB46(1)               <---------ANAC55(2)             -      --------->ARR11(3)     ---------->DOF2--------->ANAC46      <---------ALFIN1    --------->ANAC58   --------->DAG2   <---------ARR14(2)<------MYB83             --------->ANAC46<---------ANAC58    <-  ---------->DOF2--------->HSFB2a(2) <---------MYB46(3) <-----------ARR10    ------>NtERF2        ---   tcgaaaaagctctccttctccagaccctcgaagaagcagttggtaaacacaacatcacaatcttcgcaccacgcaacgatgccttggaacgaaacttaga  15067200                                         <---------ICU4         <---------ARR11(1)            --------->ARR11(3) --------------->AtSPL8         --------->ARR11(3)           <---------CCA1(2)<---------YAB1        <---------CCA1(2)   --------->ANAC58      <---------ICU4 <---------ALFIN1           --------->ANAC58      --------->YAB1 ----->MYB46(1)<---------ANAC58   --------->TOE2(3) <---------YAB1        --------->TOE2(3) ----->MYB83<----------DOF2 --------->ANAC46<-----------GT1     <---------ALFIN1 --------ALFIN1<---------ANAC58   --------->TOE1(3)<----------DOF2 <---------GLK1(2)         ------>ZmHOX2a(1) ------>MYB46(3)    --------->HSFB2a(2)<---------ARR11(1) <---------TOE2(3)------>ZmHOX2a(1)---------   cccactcttcaaatctttcttgctcgaaccaagaaacctcaaatctttacaatctttattaatgttccacattcttcctaaacgaatcacttctcctcaa  15067300  Previous    Next  AGI:  At2g35860.1    Description:  FLA16 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 PRECURSOR). Identical to Fasciclin-like arabinogalactan protein 16 precursor (FLA16) [Arabidopsis Thaliana] (GB:Q8RWC5;GB:Q9SJ64); similar to FLA15 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 15 PRECURSOR) [Arabidopsis thaliana] (TAIR:AT3G52370.1); similar to fasciclin-like arabinogalactan protein 14 [Gossypium hirsutum] (GB:ABV27485.1); contains InterPro domain Beta-Ig-H3/fasciclin (InterPro:IPR000782) Range:  from: 15066842    to: 15069201    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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