Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           <---------DAG2              <---------ANAC58         <----------DOF2          ------>ZmHOX2a(1)   <------------CBF              <---------ANAC58                                                ----  --------->ATHB12         <----------DOF2  <-----------GT1                                ---------- <---------YAB1<-----------GT1   <---------ANAC58                  <---------YAB1       --------->MYB52(1) ------->REM1(1)     --------->YAB1  <---------ANAC58 --------->YAB1                --------->YAB1   tacatcattgactttatttacaacgatgactttgtccttgcctatgttacattgtatcatcatctatttttgattcgaagagccaataagaaaccgaaaa  15047400                                                                                                    -    --------->ANAC46                                                                               --    --------->ANAC58                                                                       ==========    --------->ANAC58                                            --------->ARR11(3)         ------>ZmHOX2a(2)   <---------LBD16                                              <---------ARR14(2)        =========== <---------REM1(2)                               --------->TOE2(3)                        <------ZmHOX2a(2) <-------TEIL     <---------At4g35610       <---------GLK1(1)  <---------CCA1(2)         --------->ARR14(2) ----------->AtSPL3                 <---------MYB52(2)     <-----------HVH21             <---------ARR14(2) ->GT1            --------->At4g35610 --------->MYB52(1)  --------->ANAC46            <---------ANAC46   acgtacacggactcttacttagctaaacaactcgagtaactaatggttatcccttaatacatgtcatatctagactctagtcatcgtttcggatccaaat  15047500                                                                  <---------ANAC46                                                                  --------->ANAC55(2)           --------->ANAC55(2)                                    <------MYB46(1)           <---------ANAC55(2)                                    <---------ANAC55(2)         ------------->DYT1                                       <------MYB83       <-----------HVH21                                          <---------ANAC55(1)      --------->WOX13(1)                           <---------AHL20(2)    <---------ATHB12                              --------->AHL20(1)  --------->WOX13(1)                              <---------AHL20(1)                              --- ----->ZmHOX2a(1)                                 <---------AHL20(2)              xxxxxxxxxxxxxxxxxxx ------->TOE2(3)                                  --------->AHL20(2)--------->ALFIN1            ----- ======HOX2a_HOX2a                             --------->YAB1  <---------MYB52(1)xxxxxxxxxxxxxxxxxxx>smallRNA(si3) ======HOX2a_HOX2a                         --------->ANAC46---------->ID1   ------------------------>ANAC81   tcctcaatcagtcatgtgattttgtagagagacataaaacaatacacaaaaataaaattttgtccattaggtgttgaagataaaaaaaaaaaaaaaaaaa  15047600                                                                                                -----                                                                                        ---------->DOF2                      ---------->DOF2                 <---------ANAC58             <---------------AGL15         <---------ZAT6        --------->DAG2         <---------ANAC58             --------------->AGL15 --------->ALFIN1    <---------WRKY12     --------->ANAC58                         ================== ------>DAG2         <---------WRKY38(1)  --------->ANAC46                        --------->ZAT18 x>smallRNA(le3)   <-----------HVH21      --------->ANAC58                        <---------ZAT18   - ----->DOF2   <---------YAB1  ---------->DOF2       <---------YAB1        --------->MYB46(3)    <----   aaggtgtgcaagtgttatcaaggtcaaagaaaaaaagttcgaacacgagacttcatgcttgaagagagaaacagtaaccactagaccactaaaagaaatt  15047700                            ----------->GT1                           <---------TOE2(3)                         ---------->DOF2                        <---------AHL20(2)                     --------->AHL20(1)                     <---------AHL20(1)                    <---------------AGL15             --------->AHL20(2)             <---------AHL20(2)    <---------AHL20(2)                              <---------ICU4     --------->CCA1(2)----------->TBP                                            ------->TEIL    <----------ID1  --------------->AGL15                   --------->ATHB12    <---------GLK1(2)   - ---->AHL20(2)    <---------AHL20(2)  --------->ARR11(3)   <-------TEIL         <---------CCA1(2)---- ===================================MADS_MADS         ----------->RAV1(1) <---------GLK1(1)   ------- --------->DOF2   --------->AHL20(2)  <---------ARR11(3)  *TSS       <------ZmHOX2a(1)        ------- -----AHL20(2)  <---------YAB1     --------->AHL20(2)--------->REM1(1)  <------ZmHOX2a(1)     -------   tataaagctacaagttttattaatatataaaggaaaataaaatctctaaaaccctacaacattcatttggaggaggagacctgaatctttgcaatctcgc  15047800                               <-----------GT1                   <------ZmHOX2a(2)        <---------DEAR3(1)<---------YAB1   --------->MYB52(1) <---------At4g35610              --------->TGA1a                 <----------DOF2  --------->ARR14(2)  --------->At4g35610              ===========================================bZIP_DOF  <---------ARR14(2)  --------->ZAT2                   <---------O2                <---------GLK1(2) ------>GAMYB     --------->ARR14(2)                   <---------TGA1a          <-----------RAV1(2) ------->RAV1(1)  <---------ARR14(2)            --------->ARR14(2)       <-----------HVH21 -->ANAC58        <---------ARR11(3)            <---------ARR14(2)      --------->AtMYB61   <-------- -->ANAC58        --------->ARR11(3) <---------ANAC58  --------->O2  <---------ALFIN1<-------TEIL -->ANAC46      ----------->ARR10    <---------ANAC58------>NtERF2 ------>ZmHOX2a(1)<---------ARR11(3)   aacagaaacggcgatgggaagatcagctctgattcacttgcttcgctcccaatcccgacgtctctcttcctccaccttcacttcaggttctttttttctc  15047900                   --------->LBD16                   <---------HSFB2a(2)                      ---------->DOF2                  <---------ANAC46                     <---------LBD16                  <---------LBD16                      <---------ANAC46                  --------->HSFB2a(2)                 <---------LBD16     --------->SPL7        <----------DOF2            --------->YAB1--------------->AGL15    --------->RAP2.6(3)    <-----------GT1--------->HSFB2a(2)        <-----------GT1--------->DAG2    <----------DOF2 --------->ZAT14  <---------HSFB2a(2)   <---------ANAC46--------->LBD16  --------->MYB52(1) <---------ZAT14 <---------LBD16  <---------ATHB12   <-----------GT1  <---------ICU4 ---GT1<---------DAG2             <------ZmHOX2a(2)  --------->MYB52(1) ------>ZmHOX2a(1)        ----   cactatacacctttcattttccgggaaacaagtccgatcatggtgtttatacaatttacgggaaaagctcaatccttacggctttagagtagaaatggct  15048000                                                                                    <---------------AtSPL8          <----------DOF2                                                    <---------WOX13(1)  --------->AHL20(1)                                                       --------->ATHB12  <---------AHL20(1)                                                      <---------YAB1  <----------DOF2  --------->ARR11(3)      <-----------GT1                        <---------DAG2<------MYB46(1)  <---------ARR11(3)     <---------CCA1(2)                       <----------DOF2   ---------->DOF2 ----->At4g35610     <---------ANAC46    --------->MYB46(3)     <---------DAG2 <------MYB83         <   gctatatattgtctttatgggttttgtatatccattttctcaaaccactctcgtgattttggtttcccttttcgatttgattggtgaaagtactttgcat  15048100                                                                                        --------->ZAT14    --------->At4g35610                <-----------GT1                            <-----------GT1    <---------At4g35610            --------->AHL20(2)                 --------->ANAC58 <-----------HVH21 ---------->DOF2          <---------ANAC58                            --------->ANAC58 <---------MYB52(1) ---------MYB52(1)        <---------ANAC58                <------ZmHOX2a(2)      <-----------GT1   ccgataagctgaaatagatttgaaattgacttgagcattatataccatagcttaatctggatcagaaatggcaggctagggtttttcccgttcacttgta  15048200                                   <---------ZAT6                       --------->ANAC58                       --------->ANAC58                      --------->MYB46(2)                         --------->ALFIN1                 <--                      --------->MYB59              <---------ARR14(2)    --------->ATHB12         <--                    <---------MYB52(1)             --------->ARR14(2)  <----------DOF2       --------                  <---------MYB46(3)          --------->MYB52(1)<-------GAMYB                --------   gcattttgagttttagcaattggttaggcaatatgtagtcttggtctcaaacggatttgaaactggggttgtgcttcatttggatgagaaatggcaagtt  15048300  Previous    Next  AGI:  At2g35790.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO68985.1) Range:  from: 15047758    to: 15049202    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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