Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                      ----------->RAV1(2)                                                                                    <---------ZAT2                                                                                    <---------At4g35610                                                                                    --------->At4g35610                             <---------ANAC58                                   ------>ZmHOX2a(2)                             --------->ALFIN1                                 <---------ARR11(3)                             <---------ANAC58                                 <-----------ARR10                           <---------ANAC58                       <---------ANAC55(2)                   <-----------RAV1(1)                            <---------ANAC58  --------->ZAT2                <---------AHL20(2)                                --------->ANAC55(2)         --------->TOE2(3) <---------ANAC46           <---------ZAT14         --------->ARR11(3)      --------->ARR14(2)   <---------ANAC58         --------->REM1(2)       <---------YAB1       ----      <---------ARR14(2)<---------AtMYB61<---------CCA1(2)        <---------ANAC58<-----------RAV1(2) --->TOE2(3)   --------->AHL20(2)   ------>ZmHOX2a(1) <---------ARR14(2)  --------->YAB1      ------- >P--------->HSFB2a(2)<---------ANAC46 <---------CCA1(2)     <----------DOF2--------->ICU4------>ZmHOX2a(2)   tgtttgtggaacctctattaaatgttgtggtgtgtgtcctcttatctctcagtgtgtataccgctattacttactgtcatgatctcagctgatctataaa  15040300                                   --------->YAB1                                   <--------HAHB4                                   -------->ATHB1                                   -------->HAHB4              <---------TOE2(3)    --------->ATHB51              <---------YAB1       <---------ICU4              <---------TOE1(3)   <---------ATHB51            <---------ICU4        --------->ICU4            --------->YAB1        <---------YAB1     <---------YAB1             <---------ICU4   --------->YAB1               <--------HAHB4                                                     <-   <---------ICU4 <---------MYB46(3)                          --------->ANAC58                     <-  --------->ICU4 <--------P     --------->YAB1                --------->ANAC58                     <- ----->YAB1<---------ATHB51    --------->AHL20(2)         --------->TOE2(3)          <----------DOF2< -->YAB1   --------->ICU4      --------->ICU4            <----------ID1 --------->ICU4   <<<<<<<<<<MYB80   cataatcatgacaattatggttgtttgatgtgaataattattacatgtagttttttaaaaccacaaacaatgacatgtttagtctatctttggtttgaat  15040400                                                        <---------ICU4 <----------DOF2                                                       --------->AHL20(2)                                                       <---------AHL20(2)                                                  <---------WOX13(1)   ------>ZmHOX2a(1)          <--             ---------->DOF2                    --------->ATHB12    <---------ATHB12              <--    --------->YAB1  <---------ARR14(2)          -------->HAHB4     ------>MYB83               <------  --------->AHL20(2)--------->ARR14(2)          <---------ICU4     ------>MYB46(1)         --------->YAB1 --------ANAC58  --------->ANAC58              --------->ICU4    --------->MYB46(3)  --------->TOE2(3) --------ANAC46  --------->ANAC58              <---------YAB1    --------->AtMYB61  ----------->GT1-- --------ANAC58  --------->ANAC46            --------->YAB1<-----------GT1         <---------TOE2(3) ----------DOF2--------->MYB52(1)           <---------AHL20(2)   <---------ALFIN1  <---------TOE1(3)   tgcttttaataaccaaaaaacggaacttcaaaactcatccatggatataatgatggattaattaccaccaatccttttgagttttaacgtaaaacataat  15040500                                                                              --------->ANAC58                                                                              ----------->GT1      ------>ZmHOX2a(2)   <---------ALFIN1                                    --------->ANAC58    <---------ARR11(3)  <-----------GT1                            <---------------AGL15 <---------WOX13(1)   --------->AHL20(2)                           --------------->AGL15 -------YAB1  --------->YAB1     --------->ANAC58                 ----------------->AGL1 -------AHL20(2)    --------->YAB1         --------->MYB52(1)     ----------------->AGL2 ---ICU4     <---------YAB1      --------->ANAC58 --------->AHL20(2)  ---------->DOF2 ------->ATHB12   --------->AHL20(2)     <---------MYB52(2)  <-----------RAV1(1)   ----------->TBP <-   ttcattgatctcattctcataaaaataaacacctctcgccaaaactaacagtttatatatagactgtggccagaaagagcaagttatatatagacatact  15040600                                                                                                   --                                                                                                   --                                                                                                <----                                                                                                -----                                              --------->ANAC46                                -------                                        --------->AHL20(2)           --------->AHL20(2)      --------                                        <---------AHL20(2)         ----------->GT1           --------         <------------CBF              --------->AHL20(2)        ---------->DOF2         --------->TOE2(2)   <------ZmHOX2a(1)             --------->ANAC58            ---------->DOF2           --------->GLK1(2) --------O2     <-----------GT1  --------->ANAC58      <----------DOF2    *TSS         <-----------ARR10   cacgaggatgtcattgttttacattttgttccctcaagtcatttatttaagacacctctttcacaaagaaagaaaatagaagaaggaagaatctacgtta  15040700                                                                                      ------->GAMYB                                                                                      --------->AtMYB61                                                                                     <---------ATHB12                                                                                     --------->MYB46(3)                                                                                    -------->P                                                                                    ------>MYB46(1)                                                                                    ------>MYB83                                                                                   --------->MYB55(1)                                                                                  --------->DEAR3(1)                                                                                  --------->AtMYB61                                                                                  <---------MYB55(2)       <------ZmHOX2a(2)                                      <------MYB46(1)     <---------MYB111(2)      --------->ARR11(3)                        <---------ANAC58                  <---------MYB111(1)      <---------ARR11(3)              <----------DOF2         <---------MYB46(3)  <---------MYB46(2)     <------ZmHOX2a(1)               <---------ANAC58     --------->ALFIN1  <---------ARR14(2) ----->GAMYB                         <---------ANAC58   <---------ANAC58    --------->ARR14(2)     <- --------->HVH21            <---------AtMYB61   <---------ANAC58        ------>NtERF2<---------MYB55(2) -----DOF5.7(2)           <----------DOF2       <---------ANAC46     <---------At4g35610           -- ---->MYB52(1)           <---------ANAC46  <---------REM1(1) <---------AtMYB61    --------->MYB46(3) -->DOF5.7(2)            <---------ANAC58  <-----------RAV1(1)<------MYB83 <------ZmHOX2a(1)      <-- ->TOE2(3)               <---------ANAC58 <---------TOE2(3) <--------P <---------ANAC46   ----------- ->TOE1(3)              <------NtERF2<---------ANAC46   <---------ANAC58--------->LBD16--------->MYB52(1)   acggacaggatcatggagaagaaggtggctttggtgatggctttgatgttgcttatgtccgtgttggtttctgccgaggaaacaccaaccatcggacaga  15040800                    <----------DOF2                    <---------DAG2                --------->DEAR3(1)                --------->DREB2C(2)                ------->GAMYB               --------->DEAR3(2)           --------->LBD16          --------->ANAC58          --------->ANAC46          --------->ANAC58          --------->RAP2.3(2)                             <---------ZAT18          --------->RAP2.6(2)                             --------->ZAT18          --------->RRTF1(2)                              --------->WRKY38(1)         --------->RAP2.3(1)                           <---------bZIP60(2)        <---------At4g35610 <---------GLK1(2)          <---------ANAC58        --------->At4g35610------>MYB83                <---------ANAC46      <-----------RAV1(2)  ------>MYB46(1)             <---------ANAC58                     ---------      ---------->CDC5    <---------MYB59             <-----------HVH21            <---------ARR14(2)< --------ARR14(2) ------>MYB83                      <-----------RAV1(1)      <-----------HVH21      - ------->ARR14(2) ------>MYB46(1)               <-----------HVH21  --------->ARR14(2)      --------->MYB46(3) ----ZmHOX2a(1)--------->MYB46(3)         --------->KAN4(2)      <-----------HVH21--------->ARR14(2)< >HVH21 --------->ZAT2<-----------GT1   ------->TEIL------>ZmHOX2a(1)  ------>ZmHOX2a(1)<---------ETT(2)   ggatagactcagccgcaaccgactttaccaaattcttcgatgaacatgcccgtcctgtcgtggactccgtctcctctaccgtcaaatccgtctaccactg  15040900        --------->DAG2 <------MYB83 ----------->GT1 <------MYB46(1)                        <---------TOE1(2)                                           < >ZAT6 ---------->DOF2                 ------>ZmHOX2a(1)            ----------->GT1                -- ---------AtMYB61            --------->ARR11(3)                  <---------MYB52(1)   <-----------RAV1(1) -------->MYB46(2)           <---------ARR11(3)               <---------TOE2(3)   <----------DOF2  <- ---------MYB46(3)          <---------CCA1(2)               <---------WRKY12<-----------GT1      <---   gtttggtgataaagctaagtatgttgttttaaatctttctcctagtttctaattcacatggttcaacgttatgttatataacttctttttgttgttgttg  15041000                                                                                       ------>ZmHOX2a(2)                                                                                     <---------ARR11(3) ---------->ID1                                                                      --------->ARR11(3) -------GAMYB                                                                --------->YAB1 ------->MYB52(2)                                                           <---------ATHB12        < --------MYB46(3)                                                         --------->WOX13(1)        < ------ANAC46      --------->ALFIN1       <---------YAB1               <---------At4g35610 ----------   tttgttgtatatttgtagggaatggggactctagagatttgtttatgagcgaagaggtttggaaaacattttcagccaatcaagtttgatctccatgtac  15041100                                                                --------->ANAC46                                                                --------->ANAC58                                                                --------->ANAC58                    ---------->DOF2                          --------->ZAT14            <---------AHL20(2)                     --------->ANAC55(1)            --------->AHL20(2)                     --------->ANAC58        <---------AHL20(2)                         --------->ANAC46        --------->AHL20(2)---------->DOF2          --------->ANAC58  --------->MYB52(1)        ------    <---------YAB1 <---------AHL20(2)              ----------->GT1--------->ANAC46             ------ ----------DOF2<---------------AGL15     ---------->ID1 --------->MYB46(3)                <---------ATHB12 ---------DAG2<---------TOE2(3)   ------->TEIL     --------->ANAC55(2)                   ------>MYB46(1) ----->AtSPL8 <---------YAB1   ----------->GT1     <---------ANAC55(2)                   ------>MYB83   tactttatttttaattaatattaaaagaaaaagatgtatatttgtcttctaatacgtaacaactacacacaaaacagaaacaaataccacctatcaataa  15041200  Previous    Next  AGI:  At2g35760.1    Description:  integral membrane family protein. Identical to UPF0497 membrane protein At2g35760 [Arabidopsis Thaliana] (GB:Q8L924;GB:Q8W100;GB:Q9ZQP8); similar to integral membrane family protein [Arabidopsis thaliana] (TAIR:AT4G16442.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41794.1); contains InterPro domain Conserved hypothetical protein CHP01569, trans-membrane plant (InterPro:IPR006459); contains InterPro domain Protein of unknown function DUF588 (InterPro:IPR006702) Range:  from: 15039002    to: 15040386    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g35765.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G19500.1) Range:  from: 15040674    to: 15041170    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g35770.1    Description:  SCPL28 (serine carboxypeptidase-like 28); serine carboxypeptidase. Identical to Serine carboxypeptidase-like 28 precursor (SCPL28) [Arabidopsis Thaliana] (GB:Q8S8K6); similar to SCPL27 (serine carboxypeptidase-like 27), serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT3G07990.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68974.1); contains InterPro domain Peptidase S10, serine carboxypeptidase; (InterPro:IPR001563) Range:  from: 15041116    to: 15043597    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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