Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         <---------ATHB12                                     --------->WOX13(1)                             ------------>CBF                             <---------YAB1                                                        --                            --------->TOE2(3)                                                     <--                           --------->YAB1                                                        ----                          <xxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                 ---------                          <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                           <---------              <------------CBF    --------->YAB1---------->DOF2                 --------->ATHB12<<<<<             <---------GLK1(2)    --------->TOE2(3)                   <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)             <---------ICU4<xxxxxxxxxxxxxxxxxxxsmallRNA(l2)          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) --------->LBD16      --------->GLK1(2)     *TSS  <<<<<        <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)--------->LBD16       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)        <xxxxxxxxxxxxxxxxxxsmallRNA(se3)     <---------HSFB2a(2)--------->YAB1 <---------YAB1   <<<<< -------->AHL20(2)        <---------YAB1<---------ICU4       <----------DOF2   ------>ZmHOX2a(1)<<<<<   aaaaaaatagcctcagaattgcagaagtatcatcaatgttaatcagtcccgaaagatggtgttcttttataatctgatgtcctcattggctaaatacaat  15037000                                                                                    --------->LBD16                                                                                   --------->ANAC58                                                                                   --------->ANAC46                                                                                   --------->ANAC58                                                                                <---------ALFIN1                                                                                <---------ARR14(2)                                                                               ------>NtERF2                                                                               <---------At4g35610                                                                               --------->ABI4(1)                                                                               --------->At4g35610                                                                              <xxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                              --------->DEAR3(1)                                                                             --------->ATERF1(1)                                                   <---------ATERF1(1)       <------NtERF2                                                   <---------DEAR3(2)        --------->RAP2.3(1)                                          ------>ZmHOX2a(2)      ---------->DOF2--------->ARR14(2)                                         <------ZmHOX2a(2)    --------->At5g28300 <---------LBD16                                        --------->ARR11(3)   ----------->GT1<---------ATERF1(1)                                        <---------AGP1----------------->AGL1------>NtERF2                                        <---------ARR11(3)--------->MYB52(1)<---------RAP2.3(1)                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  <---------DEAR3(1)                                    <xxxxxxxxxxxxxxxxxxxsmallRNA(fl3)      --------->DEAR3(1)                                    <xxxxxxxxxxxxxxxxsmallRNA(se3)         --------->ANAC46                                    <xxxxxxxxxxxxxxxxxxsmallRNA(fl3)       --------->O2--------->ANAC58    ----------->GT1                 <xxxxxxxxxxxxxxxxxxsmallRNA(se3)       --------->ANAC58 ---->ZmHOX2a(1)                    <xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)--------->bZIP60(1) -------MYB59                       <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)     <---------bZIP60(1) ----->YAB1                         <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     <---------O2--------->ANAC58 --->CBF                           <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)     --------->ANAC58 --GT1                             <xxxxxxxxxxxxxxxxxxxsmallRNA(i2)       --------->ATERF1(1) <<<<ARR1                          <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)    <---------ATERF1(1) <<<<ARR1                          <xxxxxxxxxxxxxxxxxxxsmallRNA(se3)    ----------->HVH21 <<<<ARR2                          <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   --------->DEAR3(1)          < <<<<ARR2         >>>>>>>>>MYB2    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)--------->At4g35610       ----   cctaactagataaaactgaaaaccaaaatacaggggaatatagatctcatggccggtcccaaacggtaaaagcagcgacgccgctccgcaaggcaatgga  15037100                                 --------->ANAC58                         --------->MYB52(1)                      --------->ANAC46                     <---------------AGL15                    <-----------------AGL1                    ----------------->AGL1                    --------->ANAC58                    --------->ANAC58                                                --------->DOF5.7(2)                  --------->CCA1(2)                                               <---------ANAC58                  --------->GLK1(1)       --------->At4g35610              <----------DOF2                 <---------ARR14(2)       <---------At4g35610             <---------ANAC58                 <---------ARR11(3)    ---------->DOF2          --------->ANAC58  <---------ANAC58                 --------->ARR14(2)   <---------STY1(1)         --------->ANAC58  <---------ANAC46                 --------->ARR11(3)   --------->STY1(1)       <---------ANAC58 ----------->TGA1 ---------YAB1 --------->ANAC58  --------->ANAC58             <---------ANAC58 ----------->HVH21 ------>TaMYB80--------->ANAC58---------->DOF2         <-------TEIL       <---------ANAC58         <x   atatgagagccaatagcaagatacccaaaacggagaagccctagagctccatcaacgtccatgggcatgcccaattgctttgtgacgtttactagtggat  15037200                                                                     <---------MYB52(2)                                                                --------->bZIP60(2)                                                                ----------->GT1                                                                <---------TGA1a                                                                --------->TGA1a                                                                --------->ANAC58                                                                <---------bZIP60(1)                                                                --------->bZIP60(1)                                                                --------->ANAC55(1)                                                                <---------ANAC55(2)                                                                --------->O2                                                                --------->ANAC55(2)                                                                --------->ANAC58                                                                --------->ANAC46                                                           --------->bZIP60(1)                                                       --------->ARR11(3)                                                      <---------GLK1(1)                                                      --------->GLK1(1)                                                   ----------------------->TaNAC69(2)                 <---------WOX13(1)         <---------ANAC46    <---------O2     --------->YAB1                         <---------ANAC58<-----------HVH21    <---------ATHB12       ===============================================bZIP_DOF  --------->WOX13(1)       <----------DOF2  <---------ANAC58<-----------TGA1                      --- xxxxxxxxxxxxxxxxxxxxsmallRNA(i2)       <---------GLK1(2)  <---------bZIP60(1)          --------->TOE2(3)   tatgcaatcacaatttcagattgctccatctttttagtaatagattccttggagagaaatctcgtcacgtaactaatccctaacttgctaacttaatcaa  15037300                                                  --------->GLK1(2)                                                 <---------ARR14(2)                                     --------->ANAC58         --------->YAB1                                     --------->ANAC58     <------ZmHOX2a(1)  --------->TOE1(3)                --------->CCA1(2)    <---------TOE1(3)  --------->TOE2(3)               <---------ARR11(3)    <---------TOE2(3)  <---------MYB59        --------->AHL20(2)      <---------GLK1(2)          --------->DAG2  --------->AtMYB61      <---------AHL20(2)    ----------->ARR10     *TSS ---------->DOF2 ------>MYB46(3)        --------->AHL20(2)    <------ZmHOX2a(1)--------->TOE1(2)           --------->ICU4   acaacctaaaccctacaaaactcaaaattaatacaagataagctagaaggagattcttaaggaatcgtaagagtggaaaaggttgaagaagtgaagatga  15037400                  ------------>CBF             <---------MYB52(1)            <-------GAMYB           <---------ANAC46           <---------ANAC58           <---------ANAC58          <-------TEIL         <---------ANAC46       <---------MYB46(3)               <---------TOE2(3)                         --------->MYB52(1)      <---------DEAR3(1)       --------->MYB52(1)                      ------>NtERF2      <----------DOF2      --------->ALFIN1       --------->TOE2(2)                        --------->DEAR3(1) <---------DAG2    <------MYB83<---------ANAC46        <---------TOE1(3) ---------->DOF2 <----------DOF2<----------DOF2    <------MYB46(1)          --------->TOE2(3)    <------ZmHOX2a(1)<---------ALFIN1 --------->ANAC55(2)   <---------AtMYB61         --------->TOE1(2)  <---------TOE2(3)  --------->ANAC46 <---------ANAC55(2)   gaaggaaggtggtgcgttgtgtcaatttatacctaagagattagggttttgaggaagccctaaagaatcacaccgcctttaacatcacgggccttttgtt  15037500                                       <---------AHL20(2)                                      <---------YAB1                             ----------->GT1                             <------MYB83                                                <---------MYB46(3)                             <------MYB46(1)                                          <-----------RAV1(1)                 <---------ATHB12    <---------AHL20(2)                              --------->ARR11(3)           --------->ZAT18  --------->MYB59                                    ----------->GT1     --    --------->ANAC46      <---------MYB52(1) ---------->ID1                    --------->YAB1      <- --------->TOE1(2)---------->DOF2  <---------YAB1<----------DOF2        ----------->GT1  <-----------RAV1(1)   aattctacgagagagcccaattaagcccattaggtttatttttatttgtagctttataagacccattcaaattgttgtaaattgtaatatgttgttgggc  15037600                                                            <---------ZAT14                                   <---------DAG2           --------->ZAT14                                   <----------DOF2          <---------ZAT18                               --------->ZAT18            --------->ANAC46                               <---------ZAT18       ----------->HVH21                        <---------TOE2(3)          <------MYB46(1)                 ------->GAMYB <---------ZAT14     --------->At4g35610               -------->P  --------------->AtSPL8  ----------->GT1             --------->MYB46(3)--------->ZAT14     <---------At4g35610           <-----------GT1 <---------------AtSPL8  <------MYB83 <-------MYC3 ------->At4g35610      <---------TOE1(3)       <------ZmHOX2a(1)   ----------->GT1 --------At4g35610    ------>ZmHOX2a(1)       --------->MYB59   ------->MYC3           <-----------HVH21   catcagactgaataaacaaccctcctaaggttgtacacttttacaagttaggaaggtgacactgcacatgaggttactaatcccatctcggtctcggact  15037700                            <---------ZAT18                     <---------ETT(2)                <---------PCF2                             <---------ANAC58             --------->ALFIN1             --------->AHL20(2)  --------->REM1(2)           --------->ALFIN1 --------->ZAT14                <---------ANAC58        --------->DAG2      <---------ZAT14              --------->ZAT14                           <-       ---------->DOF2    <---------At4g35610            <---------ZAT14                      -------    ----------->GT1       --------->At4g35610   --------->ALFIN1--------->ETT(2)     <---------ALFIN1   tgtgtaatgtaaagtgtgggtctcatgcagttcacccatgcttataaaatgtgtgtgtgttcagtgtcgacttcgacttaaatttcaacacattgttagt  15037800                   <---------YAB1                  <---------AHL20(1)                  <---------AHL20(2)                <---------YAB1              <---------ICU4              --------->YAB1           <--------HAHB4           <---------ICU4                                                   --------->TOE2(3)          <---------YAB1                  <---------WRKY12                 --------->ANAC46          --------->ICU4  ------>ZmHOX2a(1)--------->MYB52(1)              --------->ANAC55(2)   ------>ZmHOX2a(1)  <-----------GT1     <---------WRKY38(1)              <---------ANAC55(2) --------PCF2--------->ICU4             ------>NtERF2   <---------ATHB12 <-----------GT1 -->MYB52(2) <---------YAB1<---------TOE1(2) <---------ATHB12<------ZmHOX2a(1)                    ---   ggctcctagttcattattattatttttcctagcttaacattcggccaacgatttttcaatgaaggagttttcaatttacgtcaacaaaaaaaacatacaa  15037900  Previous    Next  AGI:  At2g35750.1    Description:  unknown protein Range:  from: 15036908    to: 15037369    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g35747.1    Description:  snoRNA. snoRNA Range:  from: 15036911    to: 15036990    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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