Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  --------->AHL20(2)                                                <---------AHL20(2)                                              <----------DOF2                                              --------->TOE2(3)           <---------TOE2(3)                                          <----------DOF2              <---------AHL20(2)                                          ------>ZmHOX2a(1)         <---------AHL20(2)              <          <----------DOF2               ------>ZmHOX2a(2)           --------->AHL20(2)             <-      ------>ZmHOX2a(1)                <------ZmHOX2a(2)           --------->AHL20(1)         <------      <----------DOF2                 <---------ARR14(2)           --------->AHL20(2)         -------   <---------YAB1                     --------->ARR14(2)           <---------AHL20(2)        <-------  <-----------GT1                     --------->ARR11(3)           <---------AHL20(1)        <------- ----ZmHOX2a(1)   <----------DOF2     <---------ARR11(3)          --------->AHL20(2)         -------- ------YAB1  <-----------GT1        ----------->ARR10    --------->ANAC55(2)       ---------->DOF2<--   ggattatcctttctttaactcttttttttgttttggataagatcctttctttaatttttaagtatcaaattaatttaagttttttaaaagaacaattaat  15006400 --------------->AGL15 <-----------------AGL3 <---------------AGL15 -----------------AGL1 ----------GT1                                                                     --------->At4g35610 ---AHL20(2)                                                                  <----------DOF2 -->AHL20(2)                                                             <---------ARR11(3)      <--- --AHL20(2)                          ----------->GT1                     --------->ARR11(3)      ---- --AHL20(1)                <---------YAB1--------->AHL20(2)           --------->DAG2         -------- ->AHL20(2)       ----------->GT1<---------AHL20(2)                  ---------->DOF2        --------- ---------GT1   ---------->DOF2  <---------YAB1                   --------->YAB1   <---------At4g35610   ttacccatatttgaaatgaaaagaaaattatgtttttaattgttaaaattcaagacttcttgagccaaaaataaagttctctttgagcttaagaaaaagt  15006500                  <---------AHL20(2)             --------->AHL20(2)             --------->AHL20(1)             <---------AHL20(2)     --------->ZAT18                                     <---------ANAC46 --------ARR10    --------->AHL20(2)                  <----------DOF2 ----->GLK1(2)   --------->AHL20(2)                 <---------ICU4 ->DAG2      <---------AHL20(1)             ------>ZmHOX2a(1)           <-----------GT1           <-- ->DOF2------>ZmHOX2a(1)                   <---------LBD16 ----------->GT1                 ----------   atctaagtcctctaaaatattaaattcaaaacaaacaaaactagtcctgggtaatactttcgagtaaaaagaatttacaactaggctacaaaatagaaat  15006600                                                                                             --------                                                                                             --------                                                                                             <-------                 <---------AHL20(1)                                                         ---------                 --------->AHL20(1)                                                   <---------O2                --------->YAB1                                --------->ZAT2          --------->TGA1a                --------->AHL20(2)                            --------->At4g35610     --------->O2               <---------YAB1                                 <---------At4g35610     --------->ANAC46     --------->ARR14(2)                                 ========================================bZIP_DOF     <---------ARR14(2)                                 ---------->DOF2               <---------TGA1a -------At5g28300<---------AHL20(2)---------->DOF2    --------->YAB1             --------->ANAC46---- ->GT1     <----------DOF2     <-----------GT1   --------->AHL20(2)              <---------At4g35610   tactgcaaataggctttattatattggagtgatttactaaagtcaacaaaaaaaaatcaaaagtagctgagcaaattatctacagcccacgagagtgtag  15006700                                                                              --------->O2                                                                              --------->TGA1a                                                                              <---------O2                                                                              <---------ANAC55(2)                                                                              --------->ANAC55(2)                                                                            <-----------GT1                                                                     --------->ARR14(2)                                                                     <---------ARR11(3)                                                                     <-----------ARR10                                    <---------YAB1                   <---------ARR11(1)             - ->ZAT14                      --------->ALFIN1      --------->ATHB12------>MYB83  <----------DOF2   < ->ZAT18                    <---------ANAC46   --------->ARR11(3)   ------>MYB46(1)         --------- --ZAT14                 <---------YAB1<---------YAB1               <---------CCA1(2)       <-------- >ALFIN1               --------->YAB1--------->ATHB12               <---------ARR14(1)      --------- ----->ICU4   --------->MYB52(1)  <---------At4g35610          <-----------GT1===============bZIP_DOF   taatgggctaatgggctaatggcaactatgatgtgtagatgattagagagagcttgattagttttaaaccaaatcttatcacgtctttcattagaatccg  15006800                                   <---------AHL20(1)                                   --------->AHL20(2)       <---------YAB1              <---------AHL20(2)     ----------->GT1             *TSS                                                           <----     --------->YAB1           ------------>CBF      <-----------GT1                     ------------- -------->AHL20(2)   <----------DOF2<---------AHL20(2) --------->TOE2(3)                ------>ZmHOX2a(1) ---------AHL20(2)  <---------HSFC1(2)           <---------ICU4                         <------------ >ARR14(2)          --------->HSFB2a(1)        <----------DOF2                         -------------- -ARR14(2)          --------->HSFC1(2)        --------->TOE2(3)                        --------->TOE2(3) >GLK1(2)           <---------HSFB2a(1)    <-----------GT1        <----------DOF2      <-------------   atataaatgataaatacttggaactttctattaccaatttttttgttacctttattacattagtctctctttctgttcaaacttgtaatcctaaaaatag  15006900       ------>ZmHOX2a(1)   <---------ARR11(3)                                       <---------DAG2   <---------ARR14(2)                                       <----------DOF2   --------->ARR14(2)                                    --------->ARR11(3) ------ID1                                               <---------ARR11(3) -->AGL15                         <---------YAB1---------->DOF2                  <----------DOF2 ---AGL15         <---------HSFB2a(2)         --------->MYB46(3)             <----------DOF2 --->AGL3         --------->HSFB2a(2)        --------->ANAC58          <---------ANAC58        <----- ----AGL3  <---------MYB52(1) <----------DOF2--------->ANAC58          <---------ANAC58  <-----------GT1   aacaaaatcctctgttttttctgtaacgaattctttcttattgaatcacccaaaggtaagagcttttttagtggcttctctttctttgatttatccaatt  15007000               --------->ARR14(2)               <---------ARR14(2)               --------->GLK1(2)                                         ---------->DOF2        -----      <---------ALFIN1                                               <------ZmHOX2a(1)         <-----    <---------ALFIN1                                                 <----------ID1       <---------DEAR3(1)    --------->ANAC58                                          <---------------------WRI1  --------->DEAR3(1)    --------->ANAC58                                         <---------At4g35610          <---------ETT(2) ----DAG2     <---------GLK1(2)  <<<<<<<<<<<<<<<<<LFY      ----------------->AGL1   <---------WRKY12   tttcacacacactcgagaatctgagacaatagagagaacaatggagagagttgatcaccttgccgatgagaggaacaaagcagagttcaacgtcgacgat  15007100                             ========================================bZIP_DOF                             <----------DOF2                          --------->ANAC58                    <---------LBD16                                              <---------GLK1(1)                 --------->ARR14(2)                                              --------->GLK1(1)                 <---------ARR14(2)                                             --------->ARR11(3)               <---------ATERF1(1)                                        --------->LBD16       ----------->RAV1(2)--------->ANAC58                              =======================HOX2a_HOX2a     ------>ZmHOX2a(2)   ------>NtERF2                                  <---------LBD16    <------ZmHOX2a(2)   <---------ALFIN1                                ------>ZmHOX2a(2)   --------->ARR14(2)   --------->DEAR3(1)                           -------->HAHB4     ------>ZmHOX2a(1)   <---------ARR14(2) --------->LBD16                        ---------->ID1<---------MYB52(1)   <---------ARR11(3) ------>NtERF2                        ==========================================   --------->ARR11(3)--------->ANAC46                      --------->TGA1a----------->GT1      <-----   <---------ARR14(3)--------->ANAC58                      --------->O2 ===========================HOX2a_HOX2a   --------->ARR14(3)--------->ANAC58                      --------->bZIP60(2)  <---------ARR11(3) ---->CCA1(2)  <---------DEAR3(2)                          <---------O2--------->ARR14(1)   ------>ZmHOX2a(1) ----ARR14(2) <---------DEAR3(1)                <---------TOE1(2)   <---------ATHB12<-----------GT1   atgaagatcgtctgggccggttcccgccacgctttcgatgtttcaaatcgtatgtctcgcctcgtcgctaatgatccggtaagatttctccttcctcctt  15007200                 <---------GLK1(1)             ------>NtERF2             ----------->RAV1(1)            --------->DEAR3(1)            <---------ETT(2)                                      --------->ANAC58            ----------->HVH21                                     --------->ANAC58           <---------------------WRI1                            --------->DAG2           --------->RAP2.3(1)                                  ---------->DOF2           ---------->DOF2          --------->LBD16                                <----------DOF2          --------->ICU4         <---------LBD16                              --------->ARR11(3)          <---------YAB1        <---------LBD16                               <---------ARR11(3)       ----------->HVH21 =====bZIP_DOF<------NtERF2                         <---------TOE2(3)      --------->At4g35610   <--- -----DOF2------>NtERF2                             <---------TOE1(3) ---------->DOF2    <------ZmHOX2a(1)   tctctgtttttccggcgacatttccgatgtgaatttcgaaacttttgccatgttaaggtctttgagaaaagcaaaagagctgtgatgagtaggaaagagt  15007300  Previous    Next  AGI:  At2g35690.1    Description:  ACX5 (ACYL-COA OXIDASE 5); acyl-CoA oxidase. Identical to Putative acyl-coenzyme A oxidase 1.2, peroxisomal (ACX1.2) [Arabidopsis Thaliana] (GB:Q9ZQP2); similar to ACX1 (ACYL-COA OXIDASE 1) [Arabidopsis thaliana] (TAIR:AT4G16760.1); similar to peroxisomal acyl-CoA oxidase 1A [Lycopersicon cheesmaniae] (GB:AAW78691.1); similar to peroxisomal acyl-CoA oxidase 1A [Lycopersicon esculentum] (GB:AAW78689.1); similar to Chain A, X-Ray Crystal Structure Of Leacx1, An Acyl-Coa Oxidase From Lycopersicon Esculentum (Tomato) (GB:2FON); contains InterPro domain Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal; (InterPro:IPR013764); contains InterPro d Range:  from: 15006833    to: 15010145    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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