Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                     ---------->DOF2                                                                 <---------ATHB12                                                               ------>MYB46(1)           --------->At4g35610                                 ------>MYB83      --------->HSFC1(1)                                     <---------MYB59      <---------HSFC1(1)                                  <---------WRKY18(1)      --------->HSFB2a(2)                          ---------->DOF2--------->YAB1      <---------HSFB2a(2)                <XXXXXXXXXXXXXXXXXXXXMIR783                            <----   atgtaattctagaagctaacatttgtgagaaaattgtctcaacaagaacagagtaaagcttgacctaatcaaagtctgtcttccaccatgtcaatttgtc  14997600                                                           --------->TOE2(3)                                                           --------->TOE1(3)                                                     ------->GAMYB                                                     --------->AtMYB61                                                    --------->MYB46(3)                                                   --------->ANAC58            <---------HSFC1(1)        <----------DOF2                            --------->ANAC58            --------->HSFB2a(2)       <---------ICU4                           <xxxxxxxxxxxxxxxxsmallRNA(i)--------->GLK1(2)       ------>ZmHOX2a(2)                    --------->ANAC58               <---------GLK1(2)    <----     --------->ARR11(3)                     --------->ANAC58               --------->ARR14(2)   -----     <---------ARR11(3)                     --------->ANAC46     <---------ICU4<---------HSFB2a(2) -------GT1     <---------ZAT6     --------->YAB1--------->MYB46(3)      ----------->ARR10     <-----   actgtttgatctttgctactgtgaacaaatcagacaatagaaatacaagtcacaaccaaaaccttaaaaattacagagattctcgaacatgaacagagga  14997700                                                         --------->ZAT14                                                         <---------ZAT14                              <---------ARR14(2)         --------->LBD16                              --------->ARR14(2)        <---------ANAC46                         ----------->RAV1(2)           <---------LBD16                              <         <------ZmHOX2a(1)<---------LBD16              --------->ZAT18                              <      --------->HSFB2a(2)<---------ANAC46              --------->ZAT14                              <      --------->LBD16   <-----------------------TaNAC69(2)                 ------>ZmHOX2a(2)      <-- -----ARR14(2)      <------MYB83                       <---------ZAT14--------->SPL7             <--- ---->ARR14(2)      <------MYB46(1)                  <---------RAP2.3(3)  <------ZmHOX2a(2) <-------- -ZmHOX2a(1)       --------->MYB59                <---------YAB1  <---------------AtSPL3    <--------   tttgtctccgaggaattgaatttggttacctggattcgaaaacatccaaagtatgactgcgcagagaatgagtacgatcggaatgaaatggatagcgttc  14997800      ------>ZmHOX2a(2)     <------ZmHOX2a(2)     --------->At4g35610    <---------ARR14(2)    --------->ARR14(2)    <-----------ARR10                                                                      <---------AtMYB61    <---------AGP1                                                                       --------->LBD16    --------->GLK1(2)                                                              --------->ARR14(2)   <---------ARR14(1)                                                              --------->GLK1(2)   <---------CCA1(2)                                                               <---------ARR14(2)   <------NtERF2                                                                   ------->TEIL  <--- ---------LBD16                 --------->LBD16                                    <-----------ARR10 ---------At4g35610            --------->LBD16                                     <---------ARR11(1) ------NtERF2                  --------->ANAC46              ---------->DOF2      <---------ARR14(1) -------DEAR3(1)               <---------LBD16        --------->TOE1(2)           <---------GLK1(2) ------HSFB2a(2)              <---------LBD16       ------->TEIL            --------->YAB1 <---------TOE2(2) -ANAC58                 <<<<<<<<<TBF1            <---------SPL7       <------NtERF2   --------->At4g35610 -ANAC58             ---------->ID1              ------>ZmHOX2a(2)   --------->ALFIN1  <---------LBD16   tcggcggatctgaatcgcgatttgttcttcttcccgggatgagagttgggatcgtacctaggcaaaagaaggtggctatcatccgaatctgcggaggttt  14997900          <---------ARR14(2)         <------NtERF2                                                       --------->ANAC58        --------->LBD16                                                      --------->ANAC46       <---------DEAR3(1)                                                <------ZmHOX2a(2)       <---------ANAC46                                                 <---------ARR14(2)      <------NtERF2                             --------->ETT(1)        --------->ARR14(2)      <---------LBD16                        <------MYB46(1)          --------->DEAR3(1)      --------->ATERF1(1)                    <------MYB83     <------NtERF2  --------->ANAC58      ------>NtERF2                          <---------MYB46(3)  --------->ATERF1(1)    <---------RAP2.3(2)            --------->At4g35610        --------->ATERF1(1)    <---------DEAR3(1)         <---------ARR14(2)           <---------RAP2.3(3)    <---------RAP2.6(2)        --------->ARR14(2)           <---------RAP2.3(2)         <-----------GT1   <---------LBD16         <------ZmHOX2a(1)<---------AtMYB61<---------RAP2.3(1)   <----------DOF2 ------AHL20(2)       <---------ANAC46     <--------P       <---------DEAR3(1)  ------->TEIL  <------   taattcgcggcggagatggtgatggcgaaggagaattcgctgagagttggtcggaaactatggaggcgctcgccgatcgacgcatctttttttcttcttt  14998000                               <-----------TBP                             --------------->AGL15                             <---------------AGL15                                             <-----                            ----------------->AGL2                                            ------>NtERF2                            ----------------->AGL3                                           --------                            <-----------------AGL2                                           --------                            <-----------------AGL3                     <---------DAG2      --------->ANAC46        --------->ANAC46--------->HSFC1(2)                          <-----------GT1        --------->ANAC58 <----------DOF2        --------->HSFB2a(1)                        <-----------GT1         --------->ANAC58 <---------DAG2         <---------HSFB2a(1)                <-----------GT1   ---------->DOF2 -------- ----DOF2     *TSS      <---------HSFC1(2) ------->TEIL <------------CBF<----------DOF2<-----------HVH21   ctacttttacgcgcttcacaaggagaaacttctatatatagaatgaatatggtttttgaattgactgttttacccttttgaaagtcaaacttcacgcgcc  14998100    <------NtERF2   ------>NtERF2   --------->LBD16  --------->ANAC46  --------->LBD16  <---------ETT(1)        <---------TOE1(2)                         <---------AHL20(2)  <---------LBD16        ------>ZmHOX2a(1)                          --------->AHL20(2) <---------LBD16     <---------ZAT18                                --------->AHL20(1)        <------ -NtERF2             --------->ZAT18                       ----------->GT1                   -------- ->ANAC46       <---------ANAC58                      --------->ARR11(3)                   --------->YAB1 ->ANAC58       <---------ANAC46               <---------LBD16     --------->AHL20(2)<-----------GT1 ->ANAC58       <---------ANAC58           --------->ZAT14----------->GT1     <---------AHL20(2)   cttcccggcaaattagtgtcgagtgtcctaagttctcataccaagaacactcggaagaaattggaaaaaaaaaattggatttttttttatcaattttaaa  14998200                                                                           ------>ZmHOX2a(2)                                                                          <------ZmHOX2a(2)                                                                         <---------ARR14(3)                                                                         --------->ARR14(3)          ---------->DOF2                         <XXXXXXXXXXXXXXXXXXXXMIR413         <---------WOX13(1)  --------->ATHB12                   --------->AHL20(2)                  <---------ARR14(2) <---------AHL20(2)      <---------AHL20(2)<----------DOF2               --------->AGP1 --------->YAB1 <---------YAB1         --------->YAB1 <-----------GT1 --------->ATHB12  --------->ARR14(2) ---AHL20(2)           --------->AHL20(2) --------->TOE2(3)              --------->ARR11(3) ->AHL20(2) ----------->GT1  ----------->GT1   <---------ANAC46          <---------ARR11(3)       <--   tttttaattggataaagaaaaacaaataaaaatgtaaaattaaacctttgtgtagaatgagtgagactgttttgagatcttggaagtaattgataacatt  14998300                                                            <---------ANAC58                                                            <---------ANAC58                                                            <---------ANAC46                                                         ----------->HVH21                                     <----------DOF2     ----------->TGA1      <---------GLK1(1)   --------->ATHB12           <-----------GT1          --------->O2            --------->GLK1(1)  <---------ATHB12       <-----------GT1       <---------ALFIN1           ------>MYB83 -------YAB1     <-----------GT1 --------------->AGL15 --------->ANAC46   ------>MYB46(1)   ttcaatgactggattagtttcactatgttacattaccttctttagaacaacacctccaagtgacgtttatcaaacctacagaaatctcaagtatgtgttt  14998400                ------>ZmHOX2a(1)             --------->YAB1                <---------YAB1         ---------->ID1       --------->WRKY38(1)       <----------DOF2<---------YAB1                    <---------CCA1(2)    <---------MYB46(3)   <----------DOF2   <----------DOF2             <----------DOF2   gagagattgttgactctcctcattgtgctatttggcattttggctcttttataattctcttcgattagtgattcttttgcattcttatcttatgtagact  14998500  Previous    Next  AGI:  At2g35660.1    Description:  CTF2A; monooxygenase. similar to CTF2B, monooxygenase [Arabidopsis thaliana] (TAIR:AT2G29720.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22321.1); contains InterPro domain Aromatic-ring hydroxylase; (InterPro:IPR003042); contains InterPro domain Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; (InterPro:IPR003953) Range:  from: 14995526    to: 14997505    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g35658.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G16840.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22322.1) Range:  from: 14997446    to: 14998014    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version