Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                <---------At4g35610                                                                           ---------->DOF2                  ----------->GT1                                         <---------REM1(1)         <---------AHL20(2)                                         <---------AHL20(2)         --------->AHL20(2)                                      --------->AHL20(1)        <---------ATHB12           --------->AHL20(2)            <---------AHL20(1)    ----------------->AGL3       <----------DOF2                 --------->AHL20(2) ------GT1 <---------TOE2(3)<----------DOF2                      <---------ARR11(3)   cttctctccaattaatgtagtagtaaaatacttttcttttaatatacaaacatataagagagagcaatattttatggtgaagcggctagatttcaatgga  14987600                                          --------->ZAT18               <---------MYB46(3)        --------->ALFIN1              --------->ALFIN1         <---------ANAC46                                 <---------ANAC58              <---------ANAC46         <---------ANAC58                      <---------YAB1            <---------MYB46(3) ----------->HVH21                <----------ID1        <---------YAB1           --------->ALFIN1  <---------At4g35610     <----------DOF2      <---------AHL20(2)           <---------AtMYB61 --------->ZAT2       --------->GLK1(2)    --------->AHL20(2)       <---------ZAT14       --------->At4g35610 <---------ARR14(2)    --------->AHL20(1)       --------->ZAT14       <---------ZAT2      --------->ARR14(2)    <---------ARR11(3)           <     --------->REM1(2)  <---------HSFB2a(2)      <---------GLK1(2)     <---------AHL20(1)     <------  <---------ANAC46   --------->GLK1(2) <---------ANAC58 --------->AHL20(2)<---------YAB1<---------ANAC58   gttagtgtgtatagtggtgggagagtctgggagctgatggtgagtgtgccagattctttttaatatgagacaaaatattattctttctatgcttgtttac  14987700                                                                            <---------ANAC58                              <---------ARR14(2)                            <---------ANAC58                              --------->KAN4(2)                           <---------ARR11(1)                              --------->ARR14(2)                          --------->ARR11(3)                             <---------KAN4(1)                            --------->ARR14(2)                        --------->TOE2(3)                                 <---------ARR11(3)           <---------------AGL15                              <---------REM1(1)         --------->ANAC46           --------------->AGL15                     <---------YAB1       <---------ARR14(2)          ----------------->AGL2                   --------->CCA1(2)      <-----------ARR10 ----------DOF2         --------->TOE1(3)        <<<<<<<<<RAP2.2         --------->GLK1(1) <---------ALFIN1 -----GT1 --------->MYB46(3) --------->KAN4(1)  ----------->ARR10        <---------CCA1(2)--------->ZAT14   atctttttttcaaccactagtagaaacctgaatattctctcgactctgtttagatatgattctgatgtagttggcatatcttgtgtaatccctccactct  14987800                                          <---------AHL20(1)                                          <---------AHL20(2)                                          --------->ARR11(3)                                          --------->AHL20(1)         ----------->GT1                                    ----------->GT1                  <---------ANAC46                                --------->ANAC58               ---------->DOF2                      -             --------->TOE2(3)  --------->ANAC58             --------->MYB46(3)     <---------------AGL15      <-----------GT1    <-------GAMYB   --------->ICU4  <---------MYB52(2)         --------------->AGL15   caaatttctaacaattcttaatttttgggttgaaacggaagtaatattttgttcttccatctaaccaaaggtcgtatatttgcaaaccaattgaagtaga  14987900                                                                                                    <                                                                                                    -                                                                                                   <-                                                                                     <---------ANAC58                                                                                     <---------ANAC46                                                                                     <---------ANAC58                                       ----------->HVH21                            <------NtERF2  --              <---------ARR14(2)    <---------AHL20(2)                              <----------------              --------->ARR14(2)    --------->AHL20(1)                     <---------AHL20(2)      --           --------->LBD16          <---------AHL20(1)        --------->DAG2  --------->DAG2       --          <---------LBD16        --------->AHL20(2)          ---------->DOF2 ---------->DOF2      ---         <---------LBD16         <---------AHL20(2)   ----------->GT1      --------->AHL20(2)   -----      ---------->DOF2        <---------RVE1(1)        <---------ANAC46     --------->YAB1    <-------   --------->TOE2(3)        --------->ARR11(3)    <------------CBF      ----------->GT1   <---------ZAT6 -------->AHL20(2)          <---------ARR11(3)  --------->ARR11(3)      --------->YAB1 <------NtERF2-   aattaacttaaaccgggaactggtttaagagatattaatatatgaccgaagacattgggtttaaaaagtcagaataataaaaagttggcgtagtctaaac  14988000                                                 *TSS                                                --------->AHL20(2)                                                ----------->TBP                                                <---------AHL20(2)                                              --------->AHL20(2)                                              <---------AHL20(2)                                              ----------->TBP                                            ----------->TBP    <-----------RAV1(2)                     --------->AHL20(2) ---------ATERF1(1)                         <---------AHL20(2) -------->ORA47(1)                        ----------->TBP --------ETT(1)                           --------->AHL20(2) --------->HVH21                          <---------AHL20(2) -------TaNAC69(2)                      ----------->TBP ------->DEAR3(1)                       --------->AHL20(2) ------->DEAR4(1)                       <---------AHL20(2)                                       ---- ------>ORA47(2)      <----------DOF2 ----------->TBP              <---------YAB1                <--- ---->ANAC46         --------->TOE2(3)--------->AHL20(2)         <-----------GT1   --------->DEAR3(1) --REM1(2)        <---------CCA1(2)   <---------AHL20(2)      <---------ICU4      --------->DEAR3(2) ----->NtERF2   --------->YAB1      ----------->TBP <---------AHL20(2)     <---------ALFIN1      ----   gccgacccagaggccctctcatacctttaccagtgcctatatatatatatatatataaacagactaattactattccccatcgcacagacccccctaaga  14988100                               --------->TOE2(3)                           ------>ZmHOX2a(2)                          <------ZmHOX2a(2)                         --------->ARR14(2)                         <---------ARR11(3)                         <---------ARR14(2)                         --------->ARR11(3)                                            <---------ETT(2)                         <---------AGP1                                           ------>NtERF2                         --------->AGP1       --------->LBD16                    --------->REM1(1)                         <-----------ARR10   <---------ATERF1(2)               ----------->RAV1(1)                         <---------ARR14(3)  --------->DEAR3(1)               ----------->HVH21                         --------->ARR14(3)  --------->DREB2C(2)          --------->At4g35610 --------->LBD16        <---------CCA1(2)    --------->ATERF1(2)          <---------ZAT14 ----->GLK1(2)         ----------->ARR10    <---------LBD16               <---------ZAT2      ------- ------ARR14(2)   ---------->DOF2         <---------ALFIN1  --------->TOE1(3)--------->At4g35610 ---- ----->ARR14(2) --------->ARR11(3)       ----------->HVH21 --------->ZAT6 <---------At4g35610 -------   atccgagagagaagaagagataatgcagatcttcgtcaaaaccctcaccggcaaaactataaccctagaagttgagagcagcgacaccatcgacaatgtt  14988200                                                                       ------->TEIL                                                                      <---------GLK1(2)                                                                  ------>ZmHOX2a(1)                                                                  <---------At4g35610               <                                                                  --------->At4g35610               <                      <---------TOE1(3)                     --------->MYB52(2)                  ----- -->YAB1  --------->LBD16                                 <---------MYB52(1)             --------->TOE2(3) ------>DOF2          <---------TOE2(3)                   ------>ZmHOX2a(1)              --------->TOE1(3) -->TOE2(3)    <---------AHL20(2)    <----------DOF2     --------->TOE2(3)               ------------   aaagccaaaatccaggtttaatttagggtttcttctcttctttatcccctcaaacgattccttagttcctctgaatctctacttgttcttaccttgaatt  14988300                         --------->GLK1(2)                            ----------->GT1      <---------TOE2(3) <---------GLK1(2)                    <---------ANAC58             =========== ---------AHL20(2)     <------ZmHOX2a(1)                     <---------ANAC58             =========== ---------YAB1   --------->HSFB2a(2)                       <---------AHL20(2)             <------ZmHOX2a(1) ------>GT1      <---------HSFB2a(2)                       <-----------GT1   --------->DAG2 --->AGL15      <---------ANAC46    --------->ICU4       <---------WOX13(1) ---------->DOF2 <--------   gtataattaagaattgtttcgagtaggaatctctagtaatcttgaagaacatggatttgatttacttgagaatagctaaaaagtgtttgtgaggattgat  14988400                      <---------ZAT2                      --------->At4g35610                 <---------At4g35610             <----------DOF2            ------>ZmHOX2a(2)         --------->ARR14(2)           <------ZmHOX2a(2)          <---------ARR11(1)          --------->ARR11(3)          <---------ARR14(2)         ------->GAMYB<---------At4g35610          <---------ICU4       <---------TOE2(3)              ------->TEIL<---------ATHB12       <---------TOE1(3)--------->ZAT18 --------->ATHB12      <-----------GT1 --------->ZAT2  --------->GLK1(2)                                        ------ =================HOX2a_HOX2a        <---------CCA1(2)                                      --------- ==================HOX2a_HOX2a       <---------ARR14(1)               ---------->DOF2================ -WOX13(1)<---------ARR11(3)<----------DOF2 ----------->GT1        <------ZmHOX2a(1) ----------->RAV1(2)   agtttgtttaacgatctttatctgagctcgcttttgttcgaatctttggtaaatcattttggggtttcaggacaaagagggcataccacctgatcaacag  14988500  Previous    Next  AGI:  At2g35630.1    Description:  MOR1 (MICROTUBULE ORGANIZATION 1). similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G28155.1); similar to hypothetical protein OsJ_003762 [Oryza sativa (japonica cultivar-group)] (GB:EAZ13937.1); similar to hypothetical protein OsI_004115 [Oryza sativa (indica cultivar-group)] (GB:EAY76268.1); similar to microtubule bundling polypeptide TMBP200 [Nicotiana tabacum] (GB:BAB88648.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain HEAT (InterPro:IPR000357) Range:  from: 14973757    to: 14987685    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g35635.1    Description:  UBQ7 (RELATED TO UBIQUITIN 2). Identical to NEDD8-like protein RUB2 precursor (RUB2) [Arabidopsis Thaliana] (GB:Q8RUC6); similar to RUB1 (RELATED TO UBIQUITIN 1) [Arabidopsis thaliana] (TAIR:AT1G31340.1); similar to Os09g0420800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063199.1); similar to Os06g0650100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058221.1); similar to polyubiquitin 2 [Deschampsia antarctica] (GB:AAM22748.1); contains InterPro domain Ubiquitin; (InterPro:IPR000626) Range:  from: 14988049    to: 14989195    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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