Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        <---------HSFC1(2)                                  ------->GAMYB         <---------TOE2(3)     ----------->RAV1(1)                                                  < -----ARR11(3)           --------->YAB1                                              <----------DOF2- -->ANAC58               <---------ICU4      --------->ANAC46           --------->ANAC55(2)   <------ -->ANAC58             ------->TEIL   --------->HSFC1(2)<-----------GT1 <---------ANAC55(2) <--------   tctcttctgtttaggtgaatacatgaatcataacaacagaagcttagacgagacattttcactcttaacaaattatgtaatagcaatctttttcagcttt  14927100               <---------AHL20(2)               --------->AHL20(2)              <---------AHL20(1)    <---------ARR14(2)    --------->ARR14(2)                                                                           ---- ---------At4g35610                                                                              ---- -------->At4g35610          <-----------GT1       <---------ARR11(3)                            ---- ----DOF2     <---------AHL20(2)                   --------->ARR11(3)                          <----- -At4g35610   --------->AHL20(2)             --------->AtMYB61----------->RAV1(1)            <-------   tcagcgaaacccctaataaaattatgcaaataaaccatcaattgacaccaaaacatctcaagaacaacacaattcacaacaatttcgactaaatgtaaca  14927200                                                        ------->TEIL                                                 --------->TOE2(3)       --------->ANAC46                   <-----------GT1     <-----------GT1           <----------ID1    --------->TOE1(3) ----->ANAC46                <---------ICU4      <---------DAG2            --------->ANAC58 ----->ANAC58                ---------->DOF2   -------->P                  --------->ANAC58 ----->ANAC58                --------->YAB1   <-----------GT1          --------->ANAC58             - ----ALFIN1         --------->AHL20(2)  <---------AHL20(2)             --------->ANAC46            -- ----GT1     --------->YAB1 <---------ATHB12<---------MYB52(2)         --------->ANAC58         -----   caccaattcacagaatcatagattatatcaataaagacaaatttaaactaaccttatgaactcttgagattggacgcaaggcaagagcaatataagagaa  14927300                                                             --------->DEAR3(1)                                                            --------->ATERF1(1)                                                            <------NtERF2                                                           ------>NtERF2                                                           <---------ATERF1(1)                                                          --------->DEAR3(1)                                                        <---------ATERF1(1)                                                        --------->LBD16                                                       --------->TOE2(2)                                                   ---------->DOF2                                                =====================================================                                                ----------------->AG                                                --------->TOE2(3)                                                --------->TOE1(3)                                             --------->GLK1(1)                                             <---------GLK1(1)       >>>>>>>>>TBF1                                          ------->GAMYB--------->TOE1(2)                         ----     --------->DAG2                      --------->ANAC58 <---------DEAR3(1)                   ------   ---------->DOF2                       --------->ANAC58 ----------->HVH21                    ------ -------->At5g28300                    --------->MYB52(1)--------->RAP2.3(1)              <----------ID1 --------->GT1                     --------->REM1(1)  --------->DEAR3(2)>>>>>>>>>TBF1   ============= ---->GLK1(2)XXXXXXXXXXXXXXXXXXXX>MIR1886.1 --------->ARR14(2)------>NtERF2             ---------->DOF2   actgtaaaaggggagagagaagcgagagaaaattgctacagcaacggaaaccctaaaccggcgacgacgaagaagaagaaatcgtttggaaaaagacgag  14927400                                            --------->ZAT14                     <------NtERF2       <---------DEAR3(2)                     <---------------------WRI1                   <---------At1g77200  <---------DEAR3(1)                 <-----------HVH21     --------->ATERF1(1)                --------->TGA1a        <------NtERF2                --------->O2           <---------At4g35610         <---------GLK1(2)             --------->At4g35610       --------->AHL20(1)              <---------------------WRI1       <---------ARR11(3)    <---------ARR11(3)       --------->ARR11(3)    <-----------ARR10      <---------AHL20(2)     --------->GLK1(2)  <---------AHL20(2)------>NtERF2     <---------ORA47(2)  --------->AHL20(2)<---------DEAR3(2)<---------RAP2.3(1) ==============MADS_MADS     --------->ARR11(3) ------------->AGL3<---------DEAR3(1)<---------RAP2.3(3) --->ANAC58     <---------O2--------->RVE1(1)                     <---------ATHB12 --->ANAC58     <---------TGA1a      <---------DEAR3(1)   ---------->DOF2   ---------->DOF2     <---- =========================bZIP_DOF   <---------DREB2C(2)*TSS  ------------>CBF     ---------->DOF2   ccatttatatatattctctcgtcggcgaaaaaatctaagtcggcggtctactcttggacacaaagccaatcgtttaggcaaagaacaaagttacacattt  14927500                                                ----------->HVH21                                              <---------ICU4   --------->ANAC58           ---------->DOF2               ------------>CBF      --------->ANAC46        <-----------HVH21                <---------ATHB12      --------->ANAC58        --------->TOE2(3)               ------>MYB46(1)<-----------HVH21                     --------       --------->ANAC46                 ------>MYB83   <--------ZAP1                       ----------       --------->ANAC55(2)           --------->ANAC55(2) <---------WRKY12                  --------->ANAC58       <---------ANAC55(2)           <---------ANAC55(2)--------->WRKY18(1)        --------->YAB1----     <-----------GT1              <---------MYB52(1)  --------->LBD16            ----------->GT1 <--- -----AHL20(2)  ------------>CBF <-----------HVH21  <---------LBD16      <-----------GT1   --------->ANAC58   tttttttttacgtcaaagcccaattctaactggaccgtcacctatcaattctgacccggtcaaacacggccaatttcactatcaagtataaacaagtaaa  14927600                                                                                   --------->AHL20(2)                                                                                   <---------AHL20(2)                                                                               --------->YAB1                                                                               --------->AHL20(2)                                                                              <---------ATHB51                                                                          ----------------->AGL3                                                                   --------->GLK1(1)         <-------                                                                   <---------GLK1(1)        ---------                                                                  --------->ARR11(3)    <---------AHL20(2) ->AHL20(2)                 <-------TEIL                         <---------At4g35610    --------->AHL20(2) ->GT1----------->GT1  <---------YAB1                            --------->At4g35610   --------->AHL20(2) ----->AHL20(2)      --------->YAB1                <-----------GT1<---------ARR14(2) <---------AHL20(2) ------AHL20(2)     <---------YAB1       <-----------GT1     <-----------HVH21<---------ATHB12   taaatgtgttgtaaactactctattatagttacatagacattttttcagttttaaactagttttgtcagatatcgctccaataatataaatttataaaat  14927700                                                                    <---------AHL20(2)                                                                    --------->AHL20(2)             <---------AHL20(1)                                    <---------AHL20(1)             <---------AHL20(2)                                    <---------AHL20(2)             --------->AHL20(2)                                    --------->AHL20(1)             --------->AHL20(1)           --------->AHL20(2)       --------->AHL20(2)           <----   --------->YAB1                    <---------TOE2(3)         <---------AHL20(2)             -------  <---------YAB1  <-----------GT1<---------GLK1(2)             --------->AHL20(2)         <---------MYB46(3) --AHL20(2) --------->AHL20(2) --------->ICU4                 --------->AHL20(2)       <---------ANAC58 >AHL20(2)  <---------AHL20(2) <---------YAB1            ----------->GT1               <---------ANAC58   tgttatcataaaaaataaattttcaattttgtcaagattgtggttttaatacttcagaccagaaaaaaatttaatttttgttttagtttgagtggttagg  14927800                                                                                         <---------AHL20(1)                                                                                         --------->AHL20(2)                                                                                         --------->AHL20(1)                                                                                     <--------HAHB4                                                                                     <---------ICU4                                                                                     --------->ATHB51                                          --------->TOE1(3)                          --------->YAB1                                          --------->TOE2(3)                          -------->ATHB1                                         --------->ANAC55(2)                        <---------ATHB12                                         <---------ANAC55(2)                        <---------ATHB51                                         <---------ANAC46              <---------ANAC46  <---------AHL20(2)       --------->ANAC58                  ----------->GT1               <---------ANAC58 --------->YAB1       --------->ANAC55(2)            --------->ARR14(2)               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)       <---------ANAC55(2)            <---------MYB52(1)               <---------ANAC58 --------->AHL20(2)       --------->ANAC58               <---------ARR14(2)               <---------ANAC55(1)      <---------LBD16                <-------GAMYB                     <---------ANAC55(2)       <---     <-----------GT1                <------MYB83                       --------->ANAC55(2)   -------- --ZmHOX2a(1)                       <------MYB46(1)                   <---------TOE1(2)<---------YAB1 -->MYB59                          --------->MYB59              <---------CCA1(2)   --------->ICU4<--   acatatgttacggaatttagaagaaaacttattttgttcggttacgttaaatttgaaaataaactcatctcttacgtatgcattcaattattatattata  14927900                                 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                --------->ANAC58                                --------->ANAC58                             <---------REM1(2)                           --------->ZAT14                    ------>ZmHOX2a(1)         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)       <-----------GT1--------->SPL7    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                        <----   <----------DOF2  <---------SPL7                               <---------TOE2(3)             ------   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                           <---------TOE1(3)             ------ --------GT1       <---------ANAC58          --------->HSFB2a(1)---------->DOF2                <----- ->AHL20(2)        <---------ANAC58xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)             <---------ICU4 -----TEIL     <----------DOF2  --------->ANAC46    <----------DOF2    <---------ANAC46       <------   tacatcttttatctaaactttccttacgctgtacaaggaaattacaaacgttctctttgaatttgttaaagttgtgtttattctaaaaatttcagtgtat  14928000  Previous    Next  AGI:  At2g35510.1    Description:  SRO1 (SIMILAR TO RCD ONE 1); NAD+ ADP-ribosyltransferase. similar to RCD1 (RADICAL-INDUCED CELL DEATH1) [Arabidopsis thaliana] (TAIR:AT1G32230.1); similar to RCD1 (RADICAL-INDUCED CELL DEATH1) [Arabidopsis thaliana] (TAIR:AT1G32230.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN61759.1); contains InterPro domain Poly(ADP-ribose) polymerase, catalytic region; (InterPro:IPR012317); contains InterPro domain WWE (InterPro:IPR004170) Range:  from: 14923802    to: 14927456    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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