Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          ------->TEIL            -----                                                                     --------->ANAC58          ------                                              --------->ANAC46       --------->ANAC46          <-----                                    --------->LBD16                  --------->ANAC58          <-----                               --------->At4g35610              --------->ZAT14               <------         <---------ANAC46      <---------At4g35610     --------->At4g35610             <---------YAB1 --->At5g28300                ------->TEIL    --------->ANAC58  <---------ZAT14    --------->ARR14(2) ------HVH21    --------->ALFIN1   <-----------RAV1(2) <---------At4g35610         <---------ARR14(2) -At5g28300 ----------->ARR10<---------AtLEC2 --------->ANAC58  --------->At4g35610<---------GLK1(2)-   cacattatctggctgagagtcgggctcatttgcatctccaggtttctcaccccattcatctgtaactgcagacgcatctaggtcggattccgattcagat  14920700                  --------->ARR14(2)                  <---------ARR14(2)           ----------->ARR10       <------NtERF2         <---------LBD16    --------->ZAT18         --------->MYB52(1) ---->GLK1(2) <------ZmHOX2a(2) --->ARR14(2)<---------ARR11(3)       <---------ANAC46 ----ARR14(2)--------->ARR11(3)       <---------ANAC58 ----GLK1(2) <---------ARR14(2)       <---------ANAC58 ---At4g35610--------->ARR14(2)--------->LBD16              ---------->DOF2<---------TOE2(3)  <------ZmHOX2a(1) -------->LBD16------>ZmHOX2a(2) --------->ALFIN1     ---------->DOF2 <---------ZAT6    --------->CCA1(2)   tccgagggcagagaagatcggattttagaaaaccggagtggcttgggacgataaccaaaagagaaagagagagagttaagttttagggagatagaaggag  14920800              <----------DOF2                                                               <--------        <---------ANAC58                                                                    ---------        <---------AtLEC2                                                       <------ZmHOX2a(2)        <---------ANAC58                                                      <---------ARR11(3)        <---------ANAC46                     <------ZmHOX2a(1)  <---------ANAC58 <----------DOF2  <---------ARR11(3)                  <---------ZAT14   --------->At5g28300   <---------ARR14(2)  <---------ARR14(3)               <---------ANAC46   <---------DEAR3(1)      --------->ARR14(2)<----  --------->ARR11(3)              <------ZmHOX2a(1)----------->HVH21          --------->ARR11(3)<----  --------->ARR14(3)   <------ZmHOX2a(1)    <----------ID1      <---------ANAC58------>ZmHOX2a(2)   agaaggtcttgcttggatttatggaggaaacatagaggagtgaagaaggacgagcgacggtgaagagcgtagccatggccgatctttgtgttcgagcttg  14920900                                                        ----------->HVH21                                                        *TSS            ------------>CBF                                                      --------->At4g35610                                                      <---------At4g35610    --------->YAB1 -ZAT2                                       --------->ANAC58          --------->ANAC58 >ZAT2                                       --------->ANAC46          --------->ANAC58 --MYB83<---------LBD16                      --------->ANAC58  --------->LBD16 --MYB46(1)                                  --------->ANAC55(1)       --------->ANAC46   gtgagaaaatttcggaaaacaagattactcaagtcttagaaaatcacacgaaatttagatgaccccagaaaaaacgcaattttaaaacttcaaaaaaaaa  14921000                                                                    --------->LBD16                                                            <---------MYB52(1)                  ----------->HVH21   --------->ATHB12     <---------DAG2     <----------DOF2          --------->MYB52(1)       <-----------GT1    <----------DOF2   <---------ZAT6  --------->TOE1(3)             --------->YAB1    <---------CCA1(2)--------->ANAC46  --------->TOE2(3)             <---------ICU4    ---------->ID1  <---------LBD16 *TSS   aaaactttaaactaatgggcctgacccaggcccattataacgatttgtattcgtctctttcccttatccccgtagtgatactttgtctgagtgagtgagt  14921100                 <---------RAP2.6(2)          <---------YAB1                                                                    <--------         --------->TOE2(3)                                                                  ---------        --------->YAB1                                                                   ------>MYB83        <---------ICU4                                                           --------->ANAC58       <---------ATHB12   <---------ANAC58                            <-----------HVH21  ------>MYB46(1)     --------->WOX13(1)   <---------ANAC58                   --------->ANAC46    --------->ANAC58   <---------ATHB12  <----------DOF2      --------->YAB1 ------>ZmHOX2a(1)       --------->ANAC46   ttgaaatcaatcatcaatggctgcttttgcttctggtttggctataatcttcaactctccttcactaaaccctgtcacaactcaagcgaccttcctttct  14921200                                                          <------NtERF2                                                        <------NtERF2                                                    <-----------HVH21                                                   --------->DEAR3(1)                                                   --------->O2 ------>NtERF2                                                   <---------O2 --------->LBD16                                                   <---------bZIP60(1)                                                   --------->TGA1a                                                   <---------bZIP60(2)                                                   --------->ANAC46  --------->GLK1(2)               ------>ZmHOX2a(1)                   --------->bZIP60(2)         <---------ANAC58                          --------->bZIP60(1)         <---------ANAC58                        ------>NtERF2<---------LBD16                 -------      <---------GLK1(2)                         --------->DEAR3(1)  --------->ARR14(2)    <---------ALFIN1      --------->ARR14(2)                        ----------->HVH21   <---------ARR14(2)    ------>NtERF2      <---------ARR14(2)                      <---------ATERF1(1)<---------------------WRI1--------->MYB52(1) --------->ARR14(2)                     <---------At5g28300 <---------SPL7               --------->MYB46(3) <---------ARR14(2)                 <---------GLK1(1)   <---------RAP2.6(2)              --------->DEAR3(1) --DOF2 <-------TEIL               >>>>>>>>>>GATA-1<---------TGA1a  <---------GLK1(2)    ----------->HVH21 ------------>WRI1  ------>ZmHOX2a(1)  <-----------GT1 <---------LBD16                  --------->LBD16   tcgaatcggattcgttcctctcctcgcgttttcagtggatttcacagcctccgacgtcgcggcttccggcgattctctcaaaatgttatccccgaccggt  14921300                                 --------->MYB46(3)                               --------->ARR14(2)                               <---------ARR14(2)                             <---------SPL7                          ------>NtERF2                          --------->LBD16                         --------->ANAC46                        <---------LBD16                        --------->MYB46(3)                                    <---------ZAT14                   <---------ANAC58                                 --------->ARR14(2)                   <---------ANAC58                                 <---------ARR14(2)                <---------WOX13(1)--------->ANAC46               <---------ANAC46               -----             <---------AHL20(2)<---------ARR11(1)                <---------ANAC58         <---------ANAC46    <---------ANAC58  --------->ARR14(2)                         <---------ANAC58         <---------ANAC58    <---------GLK1(2) <---------ARR14(2)            <---------TOE1(1)    --------->O2<---------ZAT6    <---------ANAC58<----------DOF2  --------->AtMYB61 ----------->GT1   --------->TGA1a  <---------ANAC58 ---->GT1  --------->ANAC55(2)<---------CCA1(2)     <---------TOE2(1)    <---------O2<-----------RAV1(1)   ttaatagcttctcatgtaattgcttatccgccgtatccaccagcactatcgattacgaggtgaattttcgtattcacgtctatactagtgttgctggtct  14921400                                       <------MYB83                                       <------MYB46(1)                                       <---------MYB46(3)                                     <---------ANAC58                          <---------ANAC58                          <---------ANAC55(2)                                 <---------MYB46(3)            --------->AHL20(2)       <---------ANAC46               <---------ARR11(3)         ----------->GT1  <---------ANAC46                         --------->YAB1        <---------ZAT6    <---------ANAC55(1)                     --------->ICU4       <---------WOX13(1) <---------ANAC58      <---------ARR11(3)<---------YAB1             -------- ---->WOX13(1)   ----------->GT1     <---------ANAC58   ------->TEIL--------->ARR11(3)--------->TOE2(3)   atcagtctgagtgataaaatggagaattgcgtataaatggctggttccaaggtctatgtatatataccatgatcatgtagttgttgtacattagttagat  14921500                                           ===========================================bZIP_DOF                                           ---------->DOF2                                         <------NtERF2                                     <------MYB46(1)                                     <------MYB83                               ----------->ARR10                                     <---------MYB46(3)                     <---------O2                                    --------->ALFIN1                        --------->At4g35610                                    <---------AtMYB61                       <---------TGA1a                                --------->ANAC58                            --------->TGA1a                                --------->ANAC58                            =========================                                --------->ANAC46                            --------->O2                               <---------LBD16                       =================bZIP_DOF                              --------->MYB52(1)                <---------TOE2(3) --------->ARR11(3)                             --------->ZAT14                    <---------TOE1(3) <---------ARR11(3)                             <---------ZAT14              <---------TOE2(3) <---------At4g35610                           <---------At4g35610            <---------YAB1  <-----------RAV1(2)    <--- ->MYB59                   --------->At4g35610    --------->ALFIN1   ---------->DOF2         --------   aaaaattgaatcgttttcatatatgatgcagttcacggatggtggcaaagaggtggaattaagattgaggttaaagacaggtgagatactttctccaaag  14921600  Previous    Next  AGI:  At2g35490.1    Description:  plastid-lipid associated protein PAP, putative. Identical to Probable plastid-lipid-associated protein 3, chloroplast precursor (PAP3) [Arabidopsis Thaliana] (GB:O82291;GB:Q94B19); similar to plastid-lipid associated protein PAP, putative [Arabidopsis thaliana] (TAIR:AT4G22240.1); similar to plastid-lipid associated protein PAP3 [Brassica rapa] (GB:AAK57563.1); contains InterPro domain PAP fibrillin; (InterPro:IPR006843) Range:  from: 14919223    to: 14920956    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g35500.1    Description:  shikimate kinase-related. similar to unnamed protein product [Vitis vinifera] (GB:CAO63369.1); contains InterPro domain HSP20-like chaperone (InterPro:IPR008978); contains InterPro domain CS (InterPro:IPR007052) Range:  from: 14921082    to: 14923214    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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