Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       --------->DAG2                                                                    --------->SPL7 --------->HSFB2a(1)                                                   ------->MYC3    <---------MYB52(1)                                                   <-------MYC3   <---------SPL7   --------->HSFC1(2)                                                  --------->O2    <-----------HVH21<---------HSFB2a(1)         --------->YAB1                       ----------------------->TaNAC69(2)   <---------HSFC1(2)   <---------LBD16                          --------->ALFIN1   <---------At5g28300<---------TOE1(3)  --------->MYB52(1)                      --------->ALFIN1  <-----------HVH21<-------GAMYB <------ZmHOX2a(1)            --------->ARR14(2)  <---------O2<---------WRKY38(1) <---------TOE2(3) ------>DOF2            ------>NtERF2    <------NtERF2     <------MYB83 --------->ALFIN1     -------- --ZmHOX2a(1)     <-----------HVH21   <---------LBD16      <------MYB46(1)  --------->MYB52(2) --->ANAC46  --------->MYB52(1)    <-----------RAV1(2)    --------->MYB59   <---------MYB46(3)     <-   aaaggaccggatgataaacgggtcgaggccagtattttcaggcggagtggccacatggattaggtcaccgtaaggtgttcgttgaaggttccaagtagta  14907400                                                        ---------->DOF2              ----------->HVH21                                             <---------------------WRI1             --------->At5g28300                                          <---------LBD16                           <-----------HVH21                                        --------->GLK1(2)                 <---------WRKY38(1)          <---------At4g35610           --------->ARR14(2)               --------->WRKY18(1)        - --->GT1  --------->At4g35610           <---------ARR14(2)              <-----------HVH21 --------->ANAC58 --------AHL20(2)           ---------->DOF2 --------->LBD16         --------->MYB52(1)    --------->ANAC58   aataatcgattcagaagaaactgccataagaaaagagagaagaatccggcgaaaattacaaagagaagaacaccggtcaaaactacggtgacaggcatgg  14907500                                                                   <---------ICU4                                                                   --------->ATHB12               <--                                                               <-------TEIL                       <--                                                              <--------P                  -------->P                                                 --------->ETT(2) --------->ICU4         <-----------GT1                               ------->TEIL      --------->bZIP60(1)                  --------->GLK1(2)                     <---------ANAC46            --------->ANAC46 <---------YAB1     --------->ARR14(2)                    <---------At4g35610          <---------bZIP60(1) <---------YAB1  <---------ARR14(2)   <---------STY1(1)--------->At4g35610 <-----------RAV1(1)<---------TOE1(3)         <---------GLK1(2) -------->ZAT6--------->At4g35610      <---------TOE2(3)   <---------TOE2(3)     --------->LBD16  <--   aaacactagggaaaacagcagtagctggtattgaatctattgatgttgttgacgacatttgaaggttgatgattagagaaacccccagattctaccagtt  14907600       <---------ANAC46       <---------ANAC58       <---------ANAC58      --------->ATHB12    <---------WOX13(1)                                                --------->AHL20(2)       ------ <---------TOE2(2)                      <---------ANAC58     <---------YAB1                   ------- <---------TOE1(2)                      <---------ANAC58   -------->ATHB1               <------ZmHOX2a(1) -------ANAC58            <---------MYB46(3)     ---------->DOF2    ----------->GT1    ----------->GT1 -------ANAC46        --------->DAG2 --------->ARR14(2)    --------->ATHB51         --------->ICU4 -------ANAC58--------->CCA1(2)      <---------ARR14(2)   <---------YAB1          --------->CCA1(2)   tcgtagattgcttgggatataagaaaggttgttcttacaaatccttgtgagaaaaggagtattattgttcaagttaatagagagaaatgaggagaataaa  14907700                                  --------------->AGL15                                  <---------------AGL15                                 ----------------->AGL1                                 ----------------->AG                                         <------                                 <-----------------AGL2                                     <--------                             <---------ANAC58                                         <---------ICU4                             <---------ANAC58              ----------->GT1           <---------ATHB12                         <----------DOF2                   <-------GAMYB          --------->AHL20(2)                        <---------ANAC58              ----------->HVH21*TSS       <---------AHL20(2) --->DAG2               <---------ANAC58         <----------DOF2     <---------MYB52(1)    <--------- --->DOF2          <---------O2  ----------------->AGL3   ----------->GT1      --------->YAB1 -------   gtggctatgtctgagagacagaagtggctttgcttaccattttgagcgagtcttttgtgacagttaaaatcgttgtcttaataataaatcattttactgt  14907800                                                                                    --------->ANAC58                                                                      <---------LBD16                                                                      ------>ZmHOX2a(2)                                                                    <---------ARR14(2)                                                                    --------->ARR14(2)      ---------                         <------------CBF                       --------->YAB1      --------->ANAC55(2)                         <---------ICU4                         <---------ICU4      --------->ANAC46                       <---------YAB1                          <---------ATHB12     --------->ANAC58                       <---------TOE2(3)              --------->MYB59--------->ARR14(1)   --------->TOE2(3) --------->YAB1      --------->AHL20(2)               <---------TOE2(3)             <---------ANAC55(2) ---ZAT6             <---------AHL20(2)         <---------TOE2(3) <---------YAB1   --------->ZAT18 -At5g28300         --------->AHL20(2)        ---------->DOF2  --------->ICU4  <---------------AtSPL8 --GT1       <----------ID1             ---------->DOF2    ------------>CBF    <---------------AtSPL3 ---->GT1    ----------->GT1     --------->AtLEC2     <---------TOE1(3) --------->LBD16----------->RAV1(1)   taaaaataactcaaaacgaaaaattaatattgaccatggaaataaagaaaaaggtttaggtagcaatgatgatccggtttacaagtacgcaacattattt  14907900              --------->HSFB2a(2)            --------->At4g35610          ============================HOX2a_HOX2a        --------->ARR11(3)        <---------ARR11(3)      ----------->ARR10               ---------->DOF2                                              --  <------MYB83<---------HSFB2a(2)<---------WOX13(1)                            <---------ANAC46    --  <------MYB46(1)              <------ZmHOX2a(1)                               <---------ANAC58    -- --------->MYB59              <---------YAB1 <---------KAN4(2)                 <---------ANAC58   --- >AHL20(2)------>ZmHOX2a(2)  <---------TOE2(3)       ---------->DOF2    <----------DOF2        ------   agttcggtttgatcttctgcaagattagatttaggattgacaaagagaataaacaaaaagatgagagtttttgtctttgttgagtgagtcacaatctaca  14908000           <------ZmHOX2a(1) --------->RAV1(1)            ----------->GT1                                                     <-- ------->AtMYB61           <---------ALFIN1                            ----------->GT1            --- ----->GAMYB               --------->ANAC46                          <---------ATHB12    <---------ZAT14 ------>MYB46(3)          <---------REM1(2)             --------->TOE2(3)                --------->ZAT14 --->REM1(1)  <---------At4g35610          ---------->DOF2       --------->MYB46(3)     <----------DOF2   accacagaagggaggaagctaatatgtccacacagttacaagtctaaaagaagctataccttgatcaacaaatcagtgaaaatgcagtgactttactcaa  14908100                                                                                        ------->GAMYB                                                                                  --------->ANAC46                                                       <---------MYB52(1)    --------->ARR14(2)            --------->YAB1                            <-------GAMYB          <---------ARR14(2)           --------->MYB46(3)                        <---------ANAC46       <---------GLK1(1)           <---------ATHB12                   ----------------->AG        <---------ANAC58         --------->WOX13(1)       <-----------GT1 --------->ARR14(2)      <---------ANAC58      <------ZmHOX2a(2)         <---------AHL20(2)<---------ARR14(2)      <------MYB46(1)        <---     <---------ARR14(2)--------->ANAC58       ----------------->AGL1      <------MYB83---------->DOF2 -------ARR11(3)       --------->ANAC58    ------>ZmHOX2a(1)           <---------MYB52(1)--------->ZAT18 ------>ARR11(3)       --------->ANAC46    <----------DOF2            <-------GAMYB  --------->MYB52(1)   tatcgtcgatccaatcaccataaacacgactgattttatctggtcctttccatttccgttgagttctgactccgttgggtttctgcgtaacagcactaga  14908200                                                                                          ===========                                                                                          ===========                                                                                         ============                                                                                         ============                                                                                         <------ZmHOX2a(2)                                                                                        --------->ARR14(2)                                                                                  --------->KAN4(2)                                                                                 <----------TaMYB80                                                                                 <---------HSFB2a(1)                                                                                 --------->HSFB2a(1)                                                                                <---------ARR14(2)                                                                                --------->ARR14(2)                                                                                <-----------ARR10                                                                               <-------GAMYB                                                                               <------NtERF2                                                                              <---------MYB46(3)                                                                             <---------ANAC46                    <------ZmHOX2a(1)                                        <---------ANAC58                  --------->LBD16                                            <---------RAP2.6(2)   <---------MYB52(1)                                                        <---------ANAC58  <-------GAMYB  <---------LBD16                      ------>ZmHOX2a(1)   --------->ALFIN1------>ZmHOX2a(2) <---------MYB46(3)--------->LBD16                 ---------->ID1     ---------->DOF2   <---------ARR14(2) ------GLK1(1)   <-----------RAV1(2) <---------At5g28300     <----------DOF2<---------LBD16   tgtccgttgggatgagactccaggagaaacaaggctagtcactgtgtctacttgtcctctctgctttgtgtccaaagtggcggatgttccgatcttacat  14908300  Previous    Next  AGI:  At2g35420.1    Description:  zinc finger (C3HC4-type RING finger) family protein. Identical to RING-H2 finger protein ATL2H (ATL2H) [Arabidopsis Thaliana] (GB:Q6NKR1;GB:O82298); similar to ATL1F, protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G32361.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63393.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 14906794    to: 14907771    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g35430.1    Description:  zinc finger (CCCH-type) family protein. similar to zinc finger (CCCH-type) family protein [Arabidopsis thaliana] (TAIR:AT1G32360.1); similar to hypothetical protein OsI_026903 [Oryza sativa (indica cultivar-group)] (GB:EAZ05671.1); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571) Range:  from: 14907951    to: 14909464    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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