Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100     --------->ZAT18   <---------ZAT14 --------------->AtSPL8 ---------ANAC58 ---------ANAC58 ---------ANAC46 ----MYB46(1) ----MYB83 ------DEAR3(1) ------AtMYB61 ----->MYB46(2)                                        --------->ALFIN1            <-----------GT1 ----->MYB55(2)                                      --------->TGA1a       <------ZmHOX2a(1) ------MYB46(3)                                      ========================bZIP_DOF <----------DOF2 ----->MYB111(1)                                     <---------TGA1a      <---------YAB1 ----->MYB111(2)                                     <---------O2        <---------TOE1(2) ----P                                               --------->O2        <---------TOE2(3) -----MYB55(1)                                       ========================bZIP_DOF <---------DAG2 --GAMYB                                    --------->ATHB12             <---------TOE2(2)     <----- ---MYB46(3)                 --------->ANAC46<------------CBF     <----------DOF2 --------->AHL20(2) --AtMYB61            <-----------GT1     <---------WOX13(1)<---------ANAC58  --------->AHL20(2)   <- ->MYB59           ----------->GT1     <---------MYB46(3)   <---------ANAC58  <---------AHL20(2) ----   tggtgtgtacaagactacaagttgttactaaacgacatcgtttgatggattggagacgtctggctggacttttcttaggattaattaactttttgggatt  14905000                                                                       <---------AHL20(2)                                                                      <---------AHL20(2)    <---------ARR11(3)                                     <-----------GT1    --------->ARR11(3)                                    --------->AHL20(2) ----WOX13(1)                     ------>MYB83        --------->AHL20(2)                       <----- --------WOX13(1)                 ------>MYB46(1)     <---------AHL20(2)                   <--------- ----->ATHB12                <-----------GT1         --------->AHL20(2)--------->AHL20(2) <---------AHL20(2)   gattgaaatcttggtctcttcattttgtatttcaccaaatgtctcaaaactcaaaaaaaatttactaacttatttatttagaatattgaaatttaaactt  14905100                              --------->YAB1                              --------->AHL20(2)                             <---------ATHB12                                 <---------ICU4                            ------>MYB83                                      --------->YAB1                            ------>MYB46(1)                                 --------->ARR11(3)                       --------->ANAC46                               <----------ID1    <---------AHL20(2) <-----------GT1                                ----------->GT1        <-------    <-----------GT1 <---------ARR14(2)                            ---------->DOF2            <------- -----DOF2          --------->ARR14(2)                         --------------->AGL15   --------->YAB1 --GT1     <---------YAB1  --------->WOX13(1)                  <---------------AGL15  <-------TEIL   ttgtatttacattgttatagaatatacaccaatcaaattcagttttagtcaaattcgagttttgacttcaaagagaaaaatcatgagattcatcactttt  14905200                                     <---------AHL20(2)              ----------->GT1                                    <---------AHL20(1)          --------->CCA1(2)                                    <---------AHL20(2)         <---------ARR11(3) ------->PIF5                        <---------ANAC46                   --------->ANAC55(2)    <-------PIF5                     --------->ALFIN1--------->ATHB12--------->AHL20(2)<---------MYB52(1)    -------- --DAG2        <---------ZAT14      --------->AHL20(1)     <---------ANAC55(2)  ------>ZmHOX2a(1) ---DOF2       --------->ZAT14      --------->AHL20(2)    <-------TEIL<-------GAMYB          --------   ttgttcttccatttgactgcaatgtggagggattggaatttattggtataccaaaaaaaatacatgatatacggttaagttcctcgtgccatttaccttc  14905300                                                  --------->MYB52(1)                        ------------>CBF          ------>MYB46(1)                   --------->LBD16                ------>MYB83                 <---------LBD16                <---------MYB59          ------>ZmHOX2a(1)               <---------ARR14(2)               --------->AtMYB61    <-----------GT1               --------->ARR14(2)            <-----------GT1        <-----------GT1         --------->MYB111(2)               <---------KAN4(2)  --------->DAG2         --------->MYB111(1)             --------->LBD16     ---------->DOF2 ->TOE1(3)<------MYB46(1)            <-----------GT1 --------->DEAR3(1)  <----------DOF2 ->TOE2(3)<------MYB83<-------TEIL<---------AHL20(2)--------->DEAR3(2)---------->ID1   aaaaaccgaagttggtagacccggttcacaattcatttttttccgaataaccaaaccggcccaaaaagttttatccttttgtctcggtctaatccatttc  14905400                               --------->HSFB2a(1)                               <---------HSFB2a(1)                               --------->HSFC1(2)                               <---------HSFC1(2)                          <---------HSFB2a(2)                          --------->HSFB2a(2)                        --------------------->WRI1                       --------->ARR14(2)                       <---------ARR14(2)                      <-------GAMYB                    <---------ANAC46                                                <---------CCA1(2)                    <---------RAP2.6(2)                                           <---------CCA1(2)                    <---------DEAR3(1)                       <<<<<<<<<TBF1      <---------DAG2            --------->MYB52(1) <---------At4g35610  ------>ZmHOX2a(1)           --------->TOE1(3)      ---------->DOF2<---------MYB46(3)         <-----------GT1 <<<<<<<<<TBF1   --------->TOE2(3)   *TSS     <<<<<<<<<<<<<<<<<LFY    <------------------------ANAC81   ------>ZmHOX2a(1) <----------DOF2   tctagtgccaaagctaacaatggcggttttggaagcttctctctccattttctccttctcttcttcttcttcctcttcaaaaccttatctcttttctaaa  14905500                                                                                               ------                                                                                               <-----                                                                                              <------                                                                                              <------                                                                                              <------                                                                                              ------>NtERF2                                                                                              <------                                                                                              <------                                                                                              <------                                                                                              <------                                                                                          --------->ANAC46                                                                                          <---------TGA1a                                                                                          <---------O2                                                                                          ===========                                                                                          --------->O2                                                                                         <---------At5g28300                                                                                       ----------->HVH21                                                                               --------->At4g35610                                                                               <------NtERF2  <------                                                                             <---------DEAR3(1)<-----                                                                           --------->LBD16--------->TGA1a                                                                           ------>NtERF2 <---------LBD16                                                                          <---------RAP2.6(2)<-------                                          --------->ANAC58                --------->HSFB2a(2)<-------                     <---------ZAT18      --------->ANAC58                <---------ATERF1(2)<-------                  <---------At5g28300     --------->ANAC46                <---------HSFB2a(2)<-------         ------>ZmHOX2a(1)          --------->ARR14(2)                    --------->ATERF1(2)<-------        --------->TOE1(3)           <---------GLK1(1)                    --------->RAP2.6(3)---------        --------->TOE2(3)<---------MYB52(1)                              <---------LBD16--------->MYB52(1)   cgctcttcttccttaaaacttactgcccttagtcttcgaattcccagcaatctctctcccgtcttctctctacgttccggcagcgataactcacggcggc  14905600       --------->SPL7       <---------ZAT14       --------->ZAT14     --------->ZAT14     <---------SPL7   --------------->AtSPL8 --->ATERF1(1) ----ZAT2 ---RAP2.6(1) ---RRTF1(1) ---ATERF1(1) ---DEAR4(2) ---MYB46(3) ---ERF1                                            <-----------HVH21 ---RAP2.3(1)             ---------->DOF2<------NtERF2 ====================================bZIP_DOF      --------->O2 ---DEAR3(2)           <------NtERF2     <-------GAMYB -NtERF2              --------->LBD16    --------->At4g35610 --DEAR3(1)          <---------ANAC46   <---------MYB46(3) --RAP2.3(2)         <------NtERF2     <---------ANAC46       <------ZmHOX2a(1) --RAP2.6(2)        <---------LBD16   <---------LBD16      <------ZmHOX2a(1)              --------->ARR14(2) --RRTF1(3)      <-----------HVH21  <---------DEAR3(1)  <-----------RAV1(2)               <---------ARR14(2) --RAP2.3(3)    <---------ANAC58--------->HSFC1(2) <---------O2                     --------->GLK1(1) >RAP2.6(3)     <---------ANAC58<---------HSFC1(2)<---------HSFC1(2)             --------->LBD16-----   tcgtctccgtactctgttccgtcgcggagaaagaaacatcggcggatgaagaaacgtcgcaggaggagaagactgaagaaacccagaattcaaatctgaa  14905700     <---------DAG2                                       <----------DOF2     <----------DOF2                <---------ZAT6      <----------DOF2   --------->HSFC1(2)           <---------YAB1         <---------ARR11(3)                     <------   <---------HSFC1(2)  <---------ANAC58               <---------ZAT2 --------->ALFIN1      <---------ARR11(3) ----->DOF2            <---------ANAC58        <---------GLK1(1)   <-----------RAV1(1)     --------->ARR11(3)   aaggaagctttttgtattcaatcttccttggtctatgagtgtaaatgacatttccgagctctttggacaatgtgggactgtgaacaatgtcgaggtcttt  14905800                                                                       <---------TOE2(2)                                                                <---------DAG2                      <----------DOF2                           <----------DOF2                     <---------ICU4               --------->TOE1(3)    <---------TOE1(2)                     --------->YAB1 --------->ANAC58    <---------AHL20(2)            <---------ANAC58    <-----------GT1   --------->TOE2(3)   ------>ZmHOX2a(1)      -------- <----------DOF2    <---------ATHB12--------->ANAC58    --------->AHL20(2)           ---------->DOF2 ----DOF2   <---------ANAC58   <---------YAB1<---------DAG2  <-----------GT1    ----------->GT1     -   cttctttctcaatttcgtttcaatctttatgttattactagcaattgccttacctcaatttataaacttttcctagattataaggcaaaaagatggaaag  14905900  Previous    Next  AGI:  At2g35410.1    Description:  33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative. similar to RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] (TAIR:AT4G09040.2); similar to RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] (TAIR:AT4G09040.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63401.1); contains InterPro domain RNA recognition motif, RNP-1; (InterPro:IPR000504); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677) Range:  from: 14905403    to: 14906829    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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