Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      ------>NtERF2                                                                   --------->ANAC58           -------                                                                   --------->bZIP60(1)      <-------- ------ICU4                                                        --------->ANAC46         --------- ----->YAB1                                  <---------HSFB2a(1)   --------->ANAC58  <---------RAP2.6(2) ---->ATHB1                                  --------->HSFB2a(1)   --------->bZIP60(2)      <-------- -----ATHB12     <---------GLK1(1)       ----------->GT1    --------->CCA1(2)       --------->RAP2.6(3) -->WOX13(1)     --------->GLK1(1)      >>>>>>>>>TBF1  <----------DOF2<---------ALFIN1      --------- -ATHB12   ---------->DOF2       ---------->DOF2  <----------DOF2  <---------bZIP60(1)    <------NtERF2   cattcccttcgtacaaaggaattcacttagagagataaagaagaagaaaattctttactttgatatgagacgccactcgaatttgagacggccgagctgg  14897800                                     <-------GAMYB                           ------>NtERF2                           --------->ABI4(2)                  ------>ZmHOX2a(2)  <---------ANAC46                --------->ARR11(3)  <---------MYB46(3)                <---------ARR11(3)  <------MYB46(1)  <---------ZAT2            <---------ANAC58        <------MYB83--------->At4g35610            <---------ANAC55(2)     --------->MYB52(2)       <-------GAMYB   <---------MYB46(3)   <---------ATERF1(1)     <---------At4g35610 <---------MYB52(1)     <---------DEAR3(2)      --------->ZAT2                    --------->ANAC58 -->ALFIN1  <---------ANAC58<------NtERF2       <---------ZAT2       --------->YAB1             <---- -ZAT2 <---------------AtSPL3       --------->MYB55(2)      <---------MYB46(3)    --------->ANAC58--- >At4g35610 --------->ANAC55(2)    <---------AtMYB61 --------->At4g35610  --------->At4g35610  ------ -At4g35610------->TEIL<---------DEAR3(1) ------->TEIL <----------DOF2    <---------At4g35610  ------ >ZAT2 --------------->AtSPL8   <-----------RAV1(1)  <---------At4g35610<---------ICU4        -------   gccgatggttttgtacgtgatctcgacggtgccattgttggttgaatctgagctcagctcttcggttgaattcatcatctcaccacgaattgtatgcaat  14897900                          <---------ARR14(2)                          --------->ARR14(2)                          *TSS                                                   <---------ANAC46          <---------TOE2(3)                                                    --------->MYB52(1) --------->YAB1        ----------------->AGL1                                 ----------->HVH21 -----ATHB12          <-----------------AG                                    --------->WRKY12 ------>WOX13(1)      <-----------------AGL1                                  ----------->TGA1 --->ANAC58      <---------TOE2(3)         --------->MYB52(1)               --------->At4g35610 --->ANAC58      <---------TOE1(3)  ----------->GT1                         <---------At4g35610 -->WOX13(1)<------ZmHOX2a(1)     <------------CBF                   --------->REM1(1)   caatgagaaattgaggattagggtttcgaatttgggaattgaaaaaaacagagtttgttttctcacttgctacttctccgatgacggagagtcgacttga  14898000                      ------>ZmHOX2a(1)              <---------ARR14(2)                                                                   <-              <-----------ARR10                                                                 -----              --------->ARR14(2)                   ------->GAMYB                               ------             <---------CCA1(2)                  <-----------GT1                                ------      <---------AHL20(1)                    <---------DAG2                                    -------      --------->AHL20(1)                    <----------DOF2                                  --------      <---------ARR11(3)           <---------AHL20(2)              ----------->GT1     <------------CBF ------------>CBF     XXXXXXXXXXXXXXXXXXXX>MIR835-5P  ---------->DOF2                 --------->ATHB12   gttttcaatattttcatatctgtccttacatatgtttttaattccacttttaaccccaaaggtttcagagagtataaaaaactccaaaacattggaaaag  14898100       <---------ARR11(3)       --------->ARR11(3) --------->YAB1 -----------CBF                                                  <------ZmHOX2a(1) ------->CBF                                       --------->ANAC58 --->ANAC58                  --------->ALFIN1      --------->ANAC46 --->ANAC58                <---------HSFB2a(1)     --------->ANAC58              *TSS -->DAG2             ---------->DOF2     <---------DAG2  ------->MYC3      ------------>CBF      ---- -->DOF2        <-----------HVH21        <----------DOF2 <-------MYC3  ------>NtERF2      --------->ANAC55(2)   caattgtaagagcttctgcgtcaaaaagaaggtttgggttacacttttcatacacaccatatgcataggatgaggccttcaatttctgccttacatatca  14898200                                                 ------>ZmHOX2a(2)                                                <------ZmHOX2a(2)                                                <---------GLK1(1)                                                --------->GLK1(1)                                               --------->ARR11(3)                                               --------->ARR14(2)                                               --------->ARR14(3)                                               <---------ARR14(3)                                               <---------ARR11(3)                                               <---------ARR14(2)                                       <---------YAB1                                      <---------ARR14(2)                         ---------->DOF2 <----------DOF2                     --------->DAG2   --------->ARR11(3)           <----------ID1                    ---------->DOF2   <---------ARR11(3) <---------AHL20(2)             --------->ANAC58        --------->CCA1(1) <----------DOF2             --------->ANAC46        --------->RVE1(1)<-----------------AGL3                --------- ------>DOF2 --------->ANAC58      <---------GLK1(2) ------>ZmHOX2a(1)       --------->ANAC46   aaagatagaacacacacacaaataaagcaaagaaacagaatatctttgagatctcctctttatttggagaagacaaaacacagaacaagaattagaaaga  14898300                 --------->ZAT18             <---------ICU4       ----------->GT1       --------->ALFIN1       --------->ANAC58   --------->GLK1(2)                 <----------DOF2     ---------->DOF2  --------->YAB1         <---------MYB52(2)                               <------ ->DOF2--------->ANAC58<---------TOE2(3)    <---------At4g35610  <<<<<<<<<TBF1       <---------CCA1(2)   agggagagaaagcaaaaatggcactaagaatgtgggcttcttctacagcaaacgctctcaagctttcttcttctgtttccaagtctcatctctctccttt  14898400                        --------->ALFIN1                    <-----------RAV1(2)            <---------ANAC58                                <----------DOF2            <---------ANAC58                                <---------DAG2           --------->HSFC1(2)                   <---------ANAC58      <---------HSFB2a(2)                       <---------ANAC46 xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)     ------->TEIL     <---------CCA1(2)                 <---------MYB52(1) ------>ZmHOX2a(1)<---------ALFIN1  <---------ANAC46  <---------AtLEC2           ------->TEIL  ------ ----DOF2  <---------HSFC1(2) <---------YAB1    <---------ANAC58              <---------YAB1   <-----   ctccttctctagatgcttctccacaggtgtttgtaattgtgtatgtagttgtgtgtgcatagctttatctgaaactgttgatgaatgtctctgttatttt  14898500                                                                                                  <--                                        <-------GAMYB             --------->ATHB12             ------                                       <------MYB83             ------>NtERF2                  <-----                                       <------MYB46(1)        ----------------->AGL1           <-----                                       ----------->GT1        <-----------------AGL1         <-------TEIL                                  --------->ATHB12        <-------GAMYB                     <-------- --->AHL20(2)             --------->ARR14(2)             <-----------RAV1(1)            <-----------RAV1(2) ----AHL20(2)             <---------ARR14(2)      --------->RAP2.6(3)   --------->bZIP60(1)<---------GLK1(2)   tttagttttggagggtttgaagtatgcaaattcacatgagtgggttaaacatgaaggctctgttgccaccattggcatcactgcccatgctcaggttctt  14898600                                                                                -------->HAHB4                                                                               --------->ICU4                                                                               <---------YAB1 -------YAB1  ----------->GT1                                              --------->ARR11(3) --------->AGL15  <---------YAB1                                           <---------ARR11(3) ----------AGL15 --------->AHL20(2)                                       --------->YAB1 ----YAB1    <---------ZAT6                           <----------DOF2  ---------->DOF2          ----- -ARR11(3)   ----------->GT1                   <----------DOF2   ----------->GT1--------->YAB1 <-----   atttttgtaatctaagtgttaaaatagctcagaaactagatagatgtctctttggacttttggagaatggttataaagataatgatagttttgtaagatt  14898700  Previous    Next  AGI:  At2g35360.1    Description:  ubiquitin family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO63422.1); contains InterPro domain Ubiquitin; (InterPro:IPR000626) Range:  from: 14896127    to: 14897926    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g35370.1    Description:  GDCH (Glycine decarboxylase complex H). Identical to Glycine cleavage system H protein 1, mitochondrial precursor (GDCSH) [Arabidopsis Thaliana] (GB:P25855); similar to glycine cleavage system H protein, mitochondrial, putative [Arabidopsis thaliana] (TAIR:AT1G32470.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN76620.1); contains InterPro domain Single hybrid motif (InterPro:IPR011053); contains InterPro domain 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016); contains InterPro domain Glycine cleavage H-protein; (InterPro:IPR002930) Range:  from: 14898181    to: 14899297    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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