Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100      <---------AHL20(2)   --------->AHL20(2)   --------->AHL20(1)   <---------AHL20(1)   <---------AHL20(2) ---------AHL20(2) -------->AHL20(2) --------ATHB1 -------->ATHB51 ---------ICU4 ------->ICU4 --------YAB1                                         ---------->DOF2 ----->YAB1                                          --------->AHL20(2)                            <- ----ARR11(3)                                        <---------AHL20(2)         <---------YAB1     -- --->ARR11(3)                                    <---------AHL20(2)           --------->YAB1     <--- -->YAB1                                      <---------TOE2(3)            --------->WOX13(1)   ----- >DOF2                     ---------->DOF2  <---------AHL20(2)         ----------->GT1    <----------   aataatttattcgacagaaaacaaaaacaaaaagatagattagtatttaagttaattaaagtcgaatttcattttgttaatcatatttgaattcacaatt  14871500                                       --------->HSFB2a(2)                             --------->AHL20(2)                             <---------AHL20(2)   <-------TEIL          <---------AHL20(2)   ------->TEIL  --------->TOE1(2)     <---------HSFB2a(2) --------------AtSPL8    --------->AHL20(2)                                            <----------DOF2 ------------->AtSPL8   --------->AHL20(2)                                             <---------DAG2 ------AHL20(2)  --------->TOE2(2) <----------DOF2                                   --------->At4g35610 ---->AHL20(2)  --------->YAB1 <-----------GT1                                       <---------At4g35610 -GT1  <-------TEIL <---------YAB1--------->TOE2(3)     --------->ATHB12          <-------TEIL   ttatgtacatacatacaaacatatgatttaattaaacctttatagaaaaaagattgaatcgttggaaacaaaaacaaaataagattcagctttatactag  14871600                    ------>ZmHOX2a(1)                   <---------MYB59                           --------->AHL20(1)                  ------>ZmHOX2a(2)                          <---------ARR11(3)                 <------ZmHOX2a(2)                           --------->ARR11(3)               -------                --------->ARR14(2)                        ==================================HOX2a_HOX2a                --------->ARR11(3)             <---------AHL20(2)                           ---------                <---------ARR14(2)             --------->AHL20(2)                       ---------->DOF2                <---------ARR11(3)           --------->AHL20(2)                      ------>ZmHOX2a(2)               --------->GLK1(1)      --------->WOX13(1)  <------ZmHOX2a(1)    --------->CCA1(2)               <---------GLK1(1)<---------ANAC55(2)      ----------->GT1      --------->ARR11(1)    -       <---------WOX13(1)       --------->ANAC55(2)   <------ZmHOX2a(1)       <---------ARR11(3)    <   tgattttggattgatagagatcctaactaaaattatgtgtccatcaaatttatataggaaggatatattagtagacaaaagatttgatctaaaagaaagt  14871700 --------->AHL20(2)                                                       ----------->GT1 ---->GT1                                                            <----------DOF2            ----- ->DOF2       --------->YAB1                                        --------->TOE2(3)        <------- -------->AHL20(2)                        --------->ANAC58  <---------ARR11(3)               -------- ---------AHL20(2)                        --------->ANAC58  --------->ARR11(3)          <---------REM1(1)   atataaattacaaaaatcaaaacagagcgagaagagccagacacaagaaaaacaaatttgaaggtctaaacctttttggtgaaatagatgatgtaagcag  14871800                        --------->ZAT14                        <---------ZAT14                        <---------ZAT18                    --------->ZAT6                     <---------YAB1             --------------->AtSPL8           <----------DOF2   --------->AHL20(2)      <---------ICU4      ----------->RAV1(1)<-------- ---->At4g35610  ----------->HVH21                  --------->ICU4      <----------ID1  <----------DOF2 --At4g35610   <---------At4g35610             ----------->GT1<------ZmHOX2a(1)   <---------------AtSPL8 ->At4g35610   --------->At4g35610       <----------DOF2   <---------LBD16        <---------ICU4-----   acgactctctctgcttttgctgacactacacttaaatacacatctttttttgtaaatattatcaggaaaacaaaacaacaaaaattagtactttcttttg  14871900                                                                                       --------->CCA1(2)                                                                                      --------->ARR11(3)                                                                                      <---------ARR11(3)                                                                                --------->REM1(2)                                                                               --------->ALFIN1                                               --------->TOE1(2)             --------->ALFIN1 --------->AHL20(2)                            --------->TOE2(2)             <---------ANAC46 --DOF2                           *TSS   --------->YAB1                    --------->ALFIN1  <------ZmHOX2a(1) ------->CBF               <---------ARR11(3) --------->MYB46(3)   <---------ZAT14  ----------->ARR10   caattaaaccccaaattttgaaatttcagtatctctcaaactctcataaccagcgagagtgagtgagagagtagagagtgtgtggagagatactaggaag  14872000                                                         --------->ANAC58                                         --------->CCA1(2)            <---------At4g35610              ---------->DOF2          --------->YAB1    --------->ANAC58      <---------TOE1(3)          <----------ID1             <---------------------WRI1      <---------ARR11(3)       --------->DAG2           ----------->HVH21      --------->MYB52(1)      <---------TOE2(3)      ---------->DOF2         ----------->GT1   ---------->DOF2      --------->ARR11(3)   ttgaaggaaaaagcgagaaagatggctagaaacagtgacaatgatatgtgcaaagaagaacggaagagagagagcttcttcaaggttctacagagagttg  14872100                                                                <---------ANAC58                                                                <---------ANAC58                                                              --------->ARR11(3)                       --------->ARR11(3)                     <---------AHL20(2)                       --------->GLK1(2)                  <---------AHL20(2)                       <---------ARR11(3)               --------->ANAC55(2)                      --------->RVE1(1)                 <---------ANAC55(2)                 --------->At5g28300--------->ZAT6      ----------->GT1                ----------->GT1   <-----------GT1 --------->AHL20(2)  --------->MYB52(2)          <--     <---------At4g35610       <----------DOF2    <---------AHL20(2)<---------MYB52(1)--------->ICU4   atatttcttctgagaacatggtaaaaatctgttctttaactcttcatgttcttaaattatgtaatttcttgttagttttagttttgaaatgttgaaactt  14872200                              ----------->GT1                  <---------ANAC58           --------->At4g35610                                 <---                  <---------ANAC58           <---------At4g35610      --------->ANAC55(2)        ----              <-------MYC3   <---------TOE1(3)            ----------->GT1                        ----              ------->MYC3   <---------TOE2(3)     <----------DOF2    <---------ANAC58           <---   <---------ANAC46        ---------->DOF2  --------->MYB52(2)      <-----------GT1             ----- -------MYB46(3)  <---------ANAC46  --------->ARR11(3) ---------->DOF2<---------ANAC58          <----   tggttccctgtaaccatgtgtcttggtcttaaaggttaaatcttgttagctgtctttcaaaggtgaaatttttcgtgactagtctatatgggtcttcaat  14872300                                                                                                  <--                                                                                                 ----                                                                                                <----                                  <---------ZAT14                                              ------ ------AHL20(2)        <---------ANAC58                                                        ------ ----->AHL20(1)        <---------ANAC46                                                        <----- ----->AHL20(2)        <---------ANAC58                              <-----------GT1           ------ ------AHL20(1)   <-----------RAV1(1)                          <---------AHL20(2)              <----- ---->AHL20(2)    <---------MYB46(3)                         <----------DOF2                  <------ -----ATHB12   <----------DOF2    --------->ZAT14    <-----------ARR10     <----------DOF2   --------   aaattttcttgaatatgcttttgttgcttgtctcagttctctgtctgaatatgagcatctacgctttaatttttcaactttgtttgtttttggatgagat  14872400  Previous    Next  AGI:  At2g35310.1    Description:  transcriptional factor B3 family protein. similar to transcriptional factor B3 family protein [Arabidopsis thaliana] (TAIR:AT2G16210.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82372.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340) Range:  from: 14871934    to: 14873677    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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