Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                -------                                                                                              -------                                                                                      <---------AHL20(2)                                                                                     <---------AHL20(1)                                                                                     --------->AHL20(1)                                                                                  <---------AHL20(2)                                                                                  --------->AHL20(2)                                                                              <---------AHL20(2)                                                                              --------->AHL20(2)                                         <---------TOE2(3)                    <---------AHL20(1)   <----------DOF2                ------------>CBF   <-----------GT1          --------->AHL20(1) ------ICU4                       <---------ATHB12 <---------AHL20(2)   <---------TOE2(3)   --------- -MYB59                 <---------MYB52(2)----------->GT1     <---------YAB1 --------->AHL20(2)------   tttgactttagtcaatacattgacaaacaaacccaaatcaatagaggtataatttaaactggttcttatacattaagaaataaattatatatttttcgtt  14842700                                  ----------->TBP                              <<<<<<<<<GATA-1           --------->ICU4    ----------->GT1      <----------DOF2                <---------YAB1 ---------->DOF2        <---------ANAC58            <------ZmHOX2a(1)                             --- -->TOE1(3)             <---------ANAC58   --------------->AGL15                                  --- -->TOE2(3)        <---------ARR14(2)   <---------ARR11(3)                                       <--- ->ID1     ------------>CBF  <-----------GT1 <-----------TBP                                     ---- --->DOF5.7(2)     --------->ARR14(2)   --------->ARR11(3) <---------YAB1                      <-----   aacaaaagataaatacaatcgaatttgcttttatctatataagctcttcatataggagattattagacatatgctaattagttttctttctaccgatggt  14842800                                                                                    --------->ATHB51                                                                                    <--------HAHB4                                                                                    <--------ATHB1                                                                                    <---------ICU4                                                                                    --------->YAB1                                                                                   <---------ATHB12                                                                                   --------->AHL20(2)                                                                                   --------->ICU4                                                                           --------------->AtSPL8      <---------ARR14(2)                                                   --------------->AtSPL3      --------->ARR14(2)                                              --------->AHL20(2) <---------ANAC58      <---------KAN4(2)                                               <---------AHL20(1) --------->ANAC55(2)      ---------->TaMYB80                                              <---------AHL20(2) <---------ANAC58     <---------GLK1(2)                                                --------->AHL20(1) <---------ANAC55(2) ------>ANAC58                            ----------->GT1            <---------AHL20(2)<---------AHL20(2) ------>ANAC58                         --------->YAB1                --------->AHL20(2)<-----------GT1 ------ZAT18                          <---------YAB1             --------->AHL20(2)<---------ATHB51 ----->SPL7                    --------->ATHB12               ----------->GT1  ------------>CBF ----SPL7                     <---------YAB1    ---------->DOF2----------->GT1 --------->ZAT14   <---   acgcacagaatatgctaattagttttcttcatatgatttgattatagtaaaaaagaagaaacagaagttaaataaattcagtacaataattacttgatta  14842900                                 ----------->GT1                                 --------->O2                                 --------->TGA2(1)                                 <---------O2                                 <---------ANAC46                                 <---------bZIP60(1)                                 --------->bZIP60(1)                                 <---------TGA2(1)                                <-----------STF1                                ----------->STF1                         --------->TOE2(3)                        --------->ANAC58                        ----------->GT1                        --------->ANAC58             <---------------AGL15             --------------->AGL15                                   <---------LBD16 <-----------GT1            ----------------->AGL3                       ---------->DOF2      ----------->GT1            --------->YAB1     <---------TGA2(2)      <-------TEIL   <-----------------------TaNAC69(2)            <-----------------AGL2                   --------->CCA1(2)     <------ZmHOX2a(1)            <-----------------AGL3                  --------->ARR14(2)<---------ANAC55(2)            --------->TOE2(3) ----------->TGA1      <---------ARR14(2)<---------ANAC46 ------ANAC55(2)   <---------------AtSPL8    <---------ATHB12----------->GT1---------->DOF2   catgaaataatccatcttaatatggaacgtaaatgacgtcaaaaccaataaccagatacaaaagggttaattacggaggaaagaaaattacctctcgtag  14843000                                       ------->GAMYB                                    <-----------GT1                                    --------->MYB52(1)                               --------->AHL20(2)                         ----------->GT1                         <------MYB46(1)                         <---------ANAC46                         <------MYB83-------->P       <---------MYB52(1)                        --------->MYB55(2)        <---------At5g28300                        <---------MYB46(3)        <---------DOF5.7(2)                       <---------MYB55(1)       --------->DOF5.7(2)                    <---------DEAR3(1) <---------ALFIN1                                       -------                    --------->MYB55(2)<---------MYB55(2)              --------->LBD16        <-------                    --------->MYB52(2)--------->MYB46(3)             --------->ANAC46   ----------->GT1                    <---------MYB46(3)<---------MYB111(2)           <---------LBD16    <---------TOE2(3)       ----------->GT1<---------MYB52(1)  --------->AtMYB61    ---------->DOF2  ----------->GT1  --------->At5g28300<-------GAMYB<---------MYB52(2) <-------GAMYB  --------->TOE1(2)  --------->DAG2   ttggggtaaatgtaaaactgggtcgttgggtaataaactaaccacctctcgttaccgttacaaaataaaacgcgcgagagaagagtaaaaaggttataat  14843100                        --------->RAP2.6(3)                       --------->MYB52(1)                      ----------->HVH21     --------->TOE2(3)                      <---------SPL7      -------->P                  <---------ALFIN1       *TSS                --------->AtMYB61     --------->ANAC58              ------>MYB83        ------>ZmHOX2a(2)              ------>MYB46(1)   <---------ARR14(2)              -------->P--------->SPL7--------->ANAC58                   <---------MYB52(1)             --------->MYB55(1) --------->ARR11(3)                      <-------GAMYB            <---------MYB111(2) <---------AGP1                         <---------ANAC58            <-            <---------MYB59     --------->ARR14(2)                     <---------ANAC46           <--  <---------At4g35610<---------DAG2   --------->ANAC46             <---------ANAC58            <----- -->YAB1    <---------MYB46(2)  <---------ARR11(3)    <-----------GT1  <---------ANAC58      <------- --YAB1     <---------MYB111(1)<---------CCA1(2)  --------->YAB1   <---------ANAC58    <---------YAB1   agtcagttcatataccaacctcaccttacggctggatcttaagcaacctcatttataaacccctcgatttcttgcgttgttttcgaatttttattctctt  14843200                                                      <---------HSFB2a(2)                     -------                                                      --------->HSFB2a(2)                     <------                                               <---------YAB1                                 -------                                           <---------KAN4(2)                                 <-------                                          <---------GLK1(2)                            <------NtERF2                                        --------->LBD16                              <---------ANAC58     <-----------GT1                   --------->ANAC46--------->LBD16               <---------ANAC46 ---------DOF2        ----------->GT1  --------->HSFB2a(2)  <---------ARR14(2)       <---------ANAC58 ----------------------ANAC81          <---------HSFB2a(2)  --------->GLK1(2)<<<<<<<<<<<<<<<<<LFY -----DOF2    ------>ZmHOX2a(1)       <---------LBD16<---------LBD16    ------------------>SPL14    < -----------------ANAC81       <-----------GT1<-----------GT1        <-----------GT1 <---------RAP2.6(2)   tcttttttttcttctcctctcgattcgaaaatttcacatctccggaattttcatttctggagaatattgtttcacatccctacaatggcgtctgagaatc  14843300         --------->GLK1(1)         <------ZmHOX2a(2)         <---------GLK1(1)                                                                      <----        --------->ARR11(3)                                                                     ------        <---------AGP1                                     <---------TOE2(3)                  <------ZmHOX2a(2)        <---------ARR11(3)                                 <---------TOE1(3)                 <-------        --------->ARR14(2)                                <---------DOF5.7(2)                <-------        <---------ARR14(2)                              --------->DOF5.7(2)                  <-------        <-----------ARR10                              --------->YAB1                        --------        --------->ARR14(3)                             --------->TOE2(3)                     <-------        <---------ARR14(3)                            <---------ZAT6                <-------TEIL----- -->ARR14(2)                                     ----------->GT1                   --------->ARR14(1) ---ARR14(2)                                    <---------TOE1(3)                 <---------GLK1(2) -->GLK1(2)                                     <---------TOE2(3)                 --------->ARR11(1) --GLK1(2)------>ZmHOX2a(2)                     --------->MYB59           --------->GLK1(2)  -------- ---------WOX13(1)           ---------->DOF2    --------->DAG2           <---------GLK1(2)   --------   tgaatgacaagatctctgtttttaagaaactcaaagccaaatcagataataaggtaatgttaacgatgttctacagaatctatagattcgattaagatct  14843400                        --------->CCA1(2)                 ----------->HVH21                ====================HOX2a_HOX2a                ------>ZmHOX2a(2)              <---------AGP1          <------ZmHOX2a(2)<---------TOE2(3)   <-------TEIL<------ZmHOX2a(2) -----HSFB2a(2)=====================HOX2a_HOX2a >ZmHOX2a(2)  --------->ARR14(2) --AGP1   ==========================HOX2a_HOX2a                                                   <<< --ARR11(3)   --------->AGP1                --------->ARR11(3)                                  <---- --ARR14(2)   --------->ARR11(3)            <---------AHL20(1)    <---------WOX13(1)------>MYB46(1) ->ARR11(3)   <---------ARR11(3)            <---------ARR11(3)  --------->ATHB12    ----------->RAV1(1) --ARR14(3)   <---------ARR14(2)            --------->AHL20(1) <---------YAB1       ------>MYB83<---- ---->HSFB2a(2)--------->CCA1(2)     <----------DOF2   --------->ARR14(2)         --------->MYB46(3)- ->ARR14(3)  <---------CCA1(2)     <---------YAB1      <---------GLK1(2)         --------->ANAC58 <-- ->ARR14(2) ----------->ARR10<------ZmHOX2a(1)         <---------ARR14(2)        --------->ANAC58<---   cgaagttcgtcgatcagatctgacagatttaggatttatctttgaatattttttgcagatttgttttgattgcaatgcgaagaacccaacatgggcttcc  14843500           ------>ZmHOX2a(2)         <---------ARR11(3)         --------->ARR11(3)         --------->ARR14(2)         <---------ARR14(2)     --------->ANAC55(2)     <---------ANAC46     <---------ANAC55(2)    <---------LBD16   --------->MYB52(1) <---------ANAC58                  <---------MYB46(3) <---------ANAC58                <---------ZAT2          <---------ALFIN1 <-----------HVH21 <<<<<<MYB98                     --------->ZAT2        <------NtERF2     <---------At4g35610 -----ANAC58                     <---------At4g35610  <---------SPL7   <-----------RAV1(2) -----ANAC58<----------DOF2      --------->At4g35610 <---------ANAC46 <---------MYB52(1) -------->MYB52(2)      --------->ATHB12             <---------ANAC58<-----------TGA1 -------MYB52(1)    <---------AtLEC2     <---------At4g35610       <-------TEIL     <-------TEIL ----GAMYB<------ZmHOX2a(2)    <-----------RAV1(2)   <---------ANAC58<-----------HVH21   gttacttacgggatctttctctgcatcgattgctcagctgttcatcggagtcttggcgtccacattagcttcgtcaggtcatttgattcattcattcatt  14843600  Previous    Next  AGI:  At2g35208.1    Description:  unknown protein Range:  from: 14842933    to: 14843088    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g35210.1    Description:  AGD10/MEE28/RPA (MATERNAL EFFECT EMBRYO ARREST 28); DNA binding. similar to AGD8 (ARF-GAP DOMAIN 8), DNA binding [Arabidopsis thaliana] (TAIR:AT5G46750.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63407.1); contains InterPro domain Arf GTPase activating protein; (InterPro:IPR001164) Range:  from: 14843141    to: 14845228    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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