Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100      ------>ZmHOX2a(1)   --------->TOE1(3)   ====================================MADS_MADS   --------->TOE2(3)   <---------------AGL15 ---->ZmHOX2a(2) ----ZmHOX2a(2) ----->ARR14(3)                                                                                     < ----->ARR14(2)         <---------DAG2                                                              < ------ARR14(2)         <----------DOF2                                                            -- ----->AGP1<---------GLK1(2)                                                            --------->ANAC58 ------ARR11(3)        <---------------AGL15                              <----------DOF2     <------ ----->ARR11(3)        --------------->AGL15                             ------>ZmHOX2a(2)    ------- ------ARR14(3)       ----------------->AGL1                            <---------YAB1  ----------->GT1 ---->GLK1(1)       ---------->ID1                                     <---------ARR11(3)     ------- -----GLK1(1)   <---------ANAC58                                       --------->ARR11(3)    -------- ----->ARR10    <---------ANAC58 ---------->DOF2           --------->AHL20(2)           --------->ANAC58   atcttccttaacaggttttcttgttcctttatgagcaaagctagtttgaaactgtagataataaactagagatgatctttgtatatcaacaagaaaaaaa  14836800       <----------DOF2     --------->At4g35610     <---------At4g35610 ---------ANAC58               <---------REM1(1)     --------->ATHB12 ---------ANAC58            <-------TEIL            <---------YAB1     <---------ARR14(2) ------->MYB59        ----------->HVH21           --------->YAB1       --------->ARR14(2) ---AHL20(2)          ------->GAMYB             <---------ARR14(2)     --------->GLK1(2) -->AHL20(2)         <---------MYB52(2)         --------->ARR14(2)    <---------GLK1(2) -->AHL20(1)        --------->At4g35610        <---------CCA1(2)--------->YAB1 ->AHL20(2)         <---------At4g35610 ---------->DOF2 --------->AHL20(2) ----------->GT1     ------   ttgggtctgcttcatagaatgcaactgacatacatgtagccaaaaatccctatcttgattaaacaattagaagaatctggtatatcagtcttataacaaa  14836900                                                                                            ---------                                                                                            <--------   <---------ARR14(2) <---------ANAC46                                                   ---------->DOF2   --------->GLK1(2)  <---------ANAC58                                            --------->MYB52(1)   --------->ARR14(2) <---------ANAC58                                           ------>ZmHOX2a(1)   ------->TEIL --------->DAG2                                          --------------->AtSPL8 ---->DOF2     ---------->DOF2                     <---------MYB52(1)<---------YAB1      <---------At5g28300   agatgaatctggtcttgaaaagttgtgtatgagtagaagaagtctagctctcagtttgttctctgagccttctgatggtactcctaacagttacagcact  14837000                           --------->TOE1(3)                                           <---------ANAC58                           --------->TOE2(3)                                  <-----------GT1                   <---------At4g35610                                   <---------ANAC58                   --------->At4g35610                                   <---------ANAC58        ----                  <---------ATERF1(1)         ------>ZmHOX2a(1)   ------->GAMYB  ------->GAMYB------- >ZAT14      <--------P<---------ALFIN1 <---------ALFIN1         --------->MYB46(3)    <---------ANAC58 -ZAT14     --------->REM1(2)    <----------DOF2      --------->LBD16    <---------ANAC46   ---------   agcagtattcatcgtgtaggcacctccagccttaactttcccacagtccttacatccccaaattccaacagccttccgtttaacagcatacttgccacag  14837100                                                                   --------->ARR14(2)                                                                   <---------ARR14(2)                                                                   <---------ARR11(3)                                                                   <---------ARR11(1)                                                                   <-----------ARR10                                                                   --------->ARR11(3)                                                                  <---------CCA1(2)                                                               <------NtERF2      ------->GAMYB                                                               ----------------->AGL1          <---------ARR14(2)                                   <-----------------AGL1 --------->MYB52(1)<---------At4g35610              ------>ZmHOX2a(1)    --------->PCF5 ----->AGP1        --------->At4g35610         <---------ANAC58----------------->AGL3              <- -->ANAC46--------->ARR14(2)                   <---------ANAC58<-----------------AGL3              <- -->RAV1(1)        --------->ZAT2        --------->ATHB12     ------>NtERF2    --------->MYB52(1)  --   aactagcagaagtatttgctgtgctgactcacttccatcttcttgatttgcttcctaagactggcaccatatctggtcccttaacagacaacatttcaac  14837200                                                                <---------ZAT2                                                                <---------At4g35610                                                                --------->ZAT2                                                                --------->ZAT14                                                                --------->At4g35610                                     --------->YAB1           --------->ANAC46                                  --------->GLK1(1)  <---------YAB1                            --------->ARR11(3)   ------>ZmHOX2a(2)                            --------->GLK1(2)   <------ZmHOX2a(2)           ----------->GT1  <---------ARR14(2) --------->ARR11(3) <-------TEIL               <---------ARR11(3) --------->ARR14(2) --------ARR14(2)           --------->ARR14(2) <---------ARR11(3)                                  <- --------GLK1(2)     --------->At4g35610       <---------ARR14(2)        <---------ARR11(3)  <------- ------->ARR14(2) *TSS ----------->GT1 ---------->DOF2      --------->ANAC46                 --------   agattcagaaacaatgtaaaatgggctgaaaatctgaaatcaaaagagggatcttatgattcacacagcagacaacatctcatgctatgaagcatttatt  14837300          --------->ANAC58          --------->ANAC46                 --------->STY1(2)       <---------MYB52(1)          --------->ANAC58                --------->ANAC58        <---------------AGL15          <---        ---------->DOF2    <---------MYB52(1)                     --------------->AGL15          <--- --------AtLEC2           <---------RAP2.6(3)                     --------->TOE2(3)              <--- --AHL20(2)   --------->ANAC58            --------->ANAC58       ----------------->AGL3          ---- ->AHL20(2)   --------->ANAC58 <---------AHL20(2)        <-----------GT1<---------AHL20(2)       ----   tgaatgaactaaaagcaaggatttaggccgtttttatttgggccaagctagatgacattatacacttcccttaattagttgaattcggtttttcttaagt  14837400                                                                                                    <                                                                                                    -                                                                                   --------->AHL20(2) <----------DOF2                                                                   <---------AHL20(2) <---------DAG2     ------>ZmHOX2a(1)                                           --------->YAB1      - ------ZAT14       <---------MYB59                                         ----------->GT1      <---- ------ZAT18     ---------->ID1                                         <---------MYB52(1)   -------- ----TEIL <-----------GT1                                          <-----------GT1--------->AHL20(2)< ----->ZAT18    <------------------------ANAC81    --------->GLK1(1)--------->MYB52(1)<---------AHL20(2) ----->ZAT14 <----------DOF2                       <---------GLK1(1)<---------At5g28300 <-----------GT1   acactttttttttttctttgtcctaatttttcttattttcaaatttagtttggatttcgatttttgcatttaccggtttgtataataaataaacgattct  14837500                                                    <---------ZAT18                                                    --------->ZAT18                                         -------->HAHB4                                         -------->ATHB1                                         --------->ATHB51                                         <--------HAHB4                                         --------->YAB1                                         <---------AHL20(2)                                         <---------ICU4         <------ZmHOX2a(1)              --------->ICU4   <---------TOE2(3)                    <---------ATHB51                              --------->YAB1 <---------AHL20(2)                     <---------YAB1                               <---------YAB1 ---------AHL20(2)                   <---------AHL20(2)                            --------->YAB1 -------->AHL20(2)                   --------->AHL20(1)                   ---------->DOF2      <----- -------->AHL20(1)        <---------ANAC58    <---------YAB1   <---------AHL20(2) --------->ICU4 -----YAB1                <---------ANAC46  --------->YAB1    <---------AHL20(2)  <---------ATHB12 ->GLK1(2)    ---------->DOF2        --------->AHL20(2) <----------DOF2  <---------AHL20(2)   <------ ---------AHL20(1)        <---------ANAC58 <---------YAB1     --------->AHL20(2)--------->WOX13(1) <-   aatttaatgaaggactgaaagttttgtttcgttttcgaattaattattatgatgtgctctttattttaatttcatttaaagtcaattatcaaaattaagc  14837600                                              <-----------HVH21                               -------                                             --------->ANAC58                                 <------                                             --------->ANAC58                                 <------                                  >>>>>>>>>>WRKY43                                           <-------                               --------->At4g35610                                           --------                        ------>ZmHOX2a(2)   --------->SPL7                                   --------                       <------ZmHOX2a(2)    <---------TOE1(2)                                <-------                       --------->CCA1(2)  <---------SPL7                                    <------NtERF2                      --------->AGP1      --------->TOE1(2)                                 ---------                      <---------ARR14(2)  --------->TOE2(2)                                <---------MYB46(3)                      --------->ARR11(3) --------->YAB1                                   <---------ANAC58                      <---------ARR11(3)--------------->AtSPL3                            <---------ANAC46                      <---------AGP1------------>CBF                                      <---------ANAC58                      --------->ARR14(2)<---------ATHB12                                 <------NtERF2                     <---------CCA1(2) ------>MYB83                                    --------->ALFIN1                 <-----------HVH21>>>>>>>>>>WRKY38 <---------TOE1(2)                 <---------O2              --------->ARR14(2)  >>>>>>>>>>WRKY26 <---------TOE2(2)                 <---------ANAC58         --------->ALFIN1      <---------At4g35610 --------->LBD16                   <---------bZIP60(2)   ---------->DOF2  ----------->ARR10  ------>MYB46(1)                       --------->MYB52(1)  <--- ----At4g35610<---------ARR14(2) --------->WRKY38(1)          --------->GLK1(1)      <---------ANAC46 ---TOE2(3)--------->ALFIN1   <-----------------------TaNAC69(2)     <---------ALFIN1<---------ANAC58 --------TOE2(3)------>ZmHOX2a(2)----------->HVH21<-----------RAV1(2)--------->ZAT6<-----------HVH21   taatgtaaagagtgtggatcgtcagatctggagaggtgaccaatcgtacgtcccaggttatatgagttccaacactgacaaacgatgtcgtggcgggtcc  14837700  Previous    Next  AGI:  At2g35170.1    Description:  MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein /phosphatidylinositol-4-phosphate 5-kinase-related. similar to MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein /phosphatidylinositol-4-phosphate 5-kinase-related [Arabidopsis thaliana] (TAIR:AT4G17080.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70486.1); contains InterPro domain MORN motif (InterPro:IPR003409) Range:  from: 14834542    to: 14836881    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g35180.1    Description:  pseudogene, 60S ribosomal protein L37a, blastp match of 96% identity and 1.7e-35 P-value to GP|20161109|dbj|BAB90039.1||AP003335 putative 60S ribosomal protein L37a {Oryza sativa (japonica cultivar-group)} Range:  from: 14836944    to: 14837218    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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