Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         --------->ARR11(3)                       --------->ARR14(2)                       --------->ARR14(3)                       <---------ARR14(3)                       <-----------ARR10                       <---------ARR11(3)                       --------->GLK1(2)              --------->ARR14(2)              <---------GLK1(2)              <---------ARR11(3)                                    <---------ANAC58              --------->ARR11(3)                                    <---------ANAC58         ----------->RAV1(1)   --------->ANAC46                     <---------ANAC55(2)         --------->MYB52(1)   --------->LBD16         <----------DOF2           ------->TEIL ------HVH21  <---------ARR14(2)              --------->YAB1        <---------ANAC46   caggcccaaaacaacagattttcaaaatcttccccaaaactacttcaagaataaaactttagagaataatgcgtataacatgaacatatcactcactacc  14814000                                  <---------YAB1                                <---------ICU4                                <--------HAHB4                                --------->ATHB51                                       ----------->GT1                               <---------YAB1                                          <----------ID1                               --------->ICU4                                        --------->DAG2                             --------->YAB1                          <---------HSFB2a(2)                             <---------ICU4                          --------->HSFB2a(2)                             <--------HAHB4             --------->YAB1           --------->ANAC58           --------->ZAT6   <---------YAB1           --------->GLK1(1)           --------->ANAC58    --------->GLK1(2)   <---------GLK1(2)        <---------HSFB2a(2)<---------LBD16 ---------->DOF2   tccaagtttctgaacacttgtaagaagattatcattattaacagagagactcgagaaatcatatgcaatttctgggatttgatacgaaaaggagaaatat  14814100                                     --------->ANAC58                         --------->WOX13(1)                       <---------ATHB12                      --------->ANAC58                      --------->ANAC58                                --------->MYB46(3)                     --------->WOX13(1)       <----------DOF2    <---------HSFB2a(2)               --------->LBD16       --------->ANAC58            --------->HSFB2a(2)          --------->GLK1(1)         --------->DAG2       --------->YAB1XXXXXXXXXXXXXXXXXXXX>MIR837-3P          <---------GLK1(1)        ---------->DOF2      <------ZmHOX2a(2)            <---------ATHB12   tagctaatagcgatatccagagacaatcaatccagcaaaaagcaaacgctttaatccgatcagaagtcgagaacaaaccaaaaaccaataagttcaaata  14814200                                                                                                    <                                        <------ZmHOX2a(2)                                           -                                       --------->ARR11(3)                                           <                                       <---------ARR11(3)                                           -                                       ------------------------>ANAC81                              <                                      --------->GLK1(1)                                            --               ---------->DOF2      <------ZmHOX2a(1)                                              <-          =================================HOX2a_HOX2a                  --------->LBD16           ---          <------ZmHOX2a(2)     ------->GAMYB ---------->DOF2         <---------LBD16           -----        --------->At4g35610  --------->MYB52(1)                <---------TOE2(3)             --------        <---------At4g35610  ----------->RAV1(1)    ---------->DOF2<-------TEIL         --------->WRKY38(1)   gaacaatctcagatcaaaaacgcagagtaatcaacagaggagatcaaacaaagagaaaggagattgagattcaccggaagaaaaccctcgttgagcaacg  14814300    ------>ZmHOX2a(1)   --------->TOE1(3)                                                           --------->ANAC46   --------->TOE2(3)                                                           --------->ANAC58  ------>ZmHOX2a(2)                                                            --------->ANAC58 <------ZmHOX2a(2)                                                            <-------TEIL ---------ARR14(2)                                                           --------->CCA1(2) -------->ARR14(2)                                                          <---------ARR14(2) ---------ARR11(3)                                                 ------>ZmHOX2a(2) -------->ARR11(3)                                                <------ZmHOX2a(2) ---------ARR14(3)                                               --------->ARR14(3) ------->GLK1(1)        ---------->DOF2     --------->ANAC58     --------->ARR11(3) --------GLK1(1)    ------->GAMYB           --------->ANAC46     <---------ARR11(3)     ----------->RAV1(1) -------->ARR10   -------->P                --------->ANAC58    <---------GLK1(1)      --------->MYB46(3) -->GAMYB     --------->ANAC58           <---------REM1(2)      --------->GLK1(1)--------->ANAC46 ->MYB52(1)   --------->ANAC58  ---------->DOF2         <-------GAMYB       --------->ARR14(2)   gagatccttagatgagaagcaaccctagaagcccaaaagagtctacaagccattttttcgttggagagatctcgcacagatacacaacaacaacagtgag  14814400                   --------->RAP2.6(3)                   --------->SPL7                  --------->MYB52(1)                  ------>MYB83  <---------AHL20(1)               <---------DAG2                  ------>MYB46(1)                                <----------DOF2                 <---------SPL7 <---------AHL20(2)              <---------ANAC58                 --------->MYB55(1)                             <---------ANAC58                --------->DEAR3(1)                         --------->ARR14(2)                <---------MYB52(2)                    <------MYB46(1)                --------->MYB46(3)                    <---------ANAC46               --------->ANAC46 --------->AHL20(1)   --------->MYB46(2)            --------->MYB46(3) --------->YAB1        <---------MYB46(3)           --------->ANAC58    --------->AHL20(2)    --------->MYB55(2)           --------->ANAC58   <---------YAB1         --------->MYB111(1)        --------->ZAT14     <---------ICU4           --------->MYB111(2)    <---------ANAC58        <---------ZAT18     --------->YAB1      *TSS <---------AtMYB61      <---------ANAC46 <-------        --------->ZAT18    --------->ICU4    ---------->DOF2<---------GLK1(1)             <----------        <---------ZAT14    <---------YAB1<----------ID1    <---------ARR14(2)           <-----------HVH21 ---------->DOF2<---------MYB46(2)      --------->SPL7<------MYB83          <---------ANAC58 <-------   agagaaagagtgcactcaccgaacggcttattattatattcttacgacaaagggtttggtggatttgcttttttttttgcttataaaaaatgtcactttc  14814500                                            --------->ANAC58                                          ---------->DOF2                                   --------->ANAC46                                  -------->P--------->ANAC58                      <-----------GT1                                <---------MYB46(2)                             --------->YAB1   --------->ATHB12             --------->MYB46(3)                            <---------AHL20(2)  <---------ATHB12              <---------MYB55(2)                            <---------YAB1  --------->ICU4                <---------MYB52(2)                         --------->AHL20(1) --DAG2          ------------>CBF------->GAMYB ----------->RAV1(1)   <-----------GT1--------->ZAT6 -GT1    <---------ANAC58       <---------MYB111(1)    <---------TOE1(2)   <---------ARR11(3)      <- ---DOF2 <---------ANAC58       <---------MYB111(2)   <---------ANAC46     --------->AHL20(2)     ---   tgaaatcatttgctcgtagaccaatttcgcatcaactaccccactaaagcaacatcgtgggtaatgacataaaaccatatattataacactgttcaatag  14814600                                             <------ZmHOX2a(2)                                            <---------AGP1                                            <---------ARR11(3)                                            --------->AGP1                                            <---------ARR14(2)             --------->YAB1                 --------->ARR11(3)         <---------YAB1           --------->YAB1      --------->GLK1(2)         <---------YAB1------>ZmHOX2a(2)                  <---------ARR11(3)     <---------ARR14(2)     <----------DOF2<---------CCA1(2)                     --------->ARR11(3)     <---------GLK1(2)   -------->P   --------->DAG2        <----------DOF2  ---------->DOF2     --------->ARR14(2)  ------>MYB83 <---------TOE2(3)    --------->YAB1<---------ZAT6            <- ------TEIL <---------YAB1 --------->TOE2(3)--------->ARR14(2)       <---------ZAT14           <----- ------>CCA1(2)          ------>MYB46(1)   --------->At4g35610       --------->ZAT14         --------   atacaaggattctgatcataaaaatccaacctttattaataaggcagatctaaaaatgctatctttatcagtttacagttaaagatttagccatcagctt  14814700                                                            <---------ALFIN1                   <-----                             --------->ZAT18         <---------ANAC58            --------->ANAC58                    --------->ANAC58                 <---------ANAC58            --------->ANAC58 ---------ID1       --------->ANAC46               <-----------GT1           <<<<<<<ZML2      ------- -----DOF2          --------->ANAC58          --------->ZAT14         --------->ZAT14        <------- ->At4g35610    <-----------HVH21             <---------ZAT14         <---------ZAT14 ---------->DOF2   tgggacaagagaactcacagtcacgcccttgtgcattgttctaagcactgaagtaacttgttccacttgctcttcactagaacaagccgaaagaagaacc  14814800                         --------->TOE1(3)                                                   <-------                        ----------->RAV1(2)                                                  --------                  --------->ZAT18                                                            ------>MYB83                  <---------ZAT18    <---------CCA1(2)                                       ------>MYB46(1)                  --------->ZAT14  --------->YAB1                                          --------->AtMYB61                  <---------ZAT14  <---------ICU4                                          --------->MYB46(3)              <-----------RAV1(1) <---------ATHB12                                    --------->ANAC58  <---------MYB46(3)  <---------ALFIN1                                 <---------GLK1(2)   <---------ALFIN1 ----HSFB2a(1)======================RAV                            <-------TEIL       --------->ANAC58 >TEIL  ------>ZmHOX2a(1)--------->TOE2(3)           <---------HSFB2a(2)      <---------ANAC58 --ARR14(2) ----------->RAV1(2) --------->WOX13(1)   --------->HSFB2a(2)      <---------ANAC58   ----   ttggctgttcctccatctggtgcacaacctgaatcaatcatctcttcaaaaacctccagacatttcacatacagtttcttccttgagtaagcaccaatcc  14814900  Previous    Next  AGI:  At2g35120.1    Description:  glycine cleavage system H protein, mitochondrial, putative. similar to glycine cleavage system H protein, mitochondrial, putative [Arabidopsis thaliana] (TAIR:AT1G32470.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42006.1); similar to 2-oxo acid dehydrogenase, lipoyl-binding site [Medicago truncatula] (GB:ABC75361.1); contains InterPro domain Single hybrid motif (InterPro:IPR011053); contains InterPro domain 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016); contains InterPro domain Glycine cleavage H-protein; (InterPro:IPR002930) Range:  from: 14812718    to: 14814448    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g35130.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G02860.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42005.1); similar to hypothetical protein OsI_005882 [Oryza sativa (indica cultivar-group)] (GB:EAY84649.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN70089.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 14814528    to: 14817243    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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