Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 <-----                                                                                             <-------                                                                                           <-------GAMYB                                                                  <---------ICU4           <---------ANAC58                                                                 ========================HOX2a_HOX2a                                                              ===========================HOX2a_HOX2a                       <---------ALFIN1                       ------>ZmHOX2a(1)            <---------ANAC58                    --------->ANAC58                  --------->At4g35610                 <---------MYB46(3)                    --------->ANAC46                  <---------At4g35610              --------->YAB1          <-----------GT1 <---------ARR11(3)     <---------ANAC58<---------YAB1       <---------ATHB12    <----------DOF2 --------->ANAC58             <---------ANAC58------>ZmHOX2a(1)------>ZmHOX2a(2)   caattccttttttcacatactcactccacatcttcattttgttagtattttgcttcagctcttcctccttattgctaaaactgatccaatcttggttgtg  14798100                                                                                             <-------                                                                                           <---------                                                                                           ----------                                                                                          -----------                                                                                          <----------               <---------ARR11(3)                                                   <---------WRKY38(1)       ---------->DOF2                                                              <---------WRKY12  --------->DAG2   ------>ZmHOX2a(1)                                               --------->WRKY18(1) ---------->DOF2 ------>ZmHOX2a(2)                                                <-----------HVH21 ----ANAC46    --------->ARR11(3)                                                 <--------ZAP1------ --MYB46(3)  <---------YAB1                                             --------->TOE2(3)------------   ggagaaagcgaaagtatgatcctgccatgtttctccaagtttggagagccaactatagcctagaatcacatcagcctcagtctcggtcaaatccaataaa  14798200      ------>ZmHOX2a(1)     --------->TOE2(3)                                       ------>NtERF2 <---------AHL20(2)  <---------ARR14(2)                                         --------->ABI4(1)  --------->ARR14(2)                                        --------->DREB2C(2) --------->GLK1(1)                                          <---------ALFIN1 <---------GLK1(1)                                          --------->DEAR3(1) --ATHB12                                                  --------->ORA47(2) ------AGL15                                               --------->DEAR3(2)                   ----- ----->AGL15                                               --------->DEAR4(2)         ------->MYC3 ---->AGL15                                               ------->TEIL     --------->AHL20(2)   <---- -----AGL15                ------->TEIL                   <---------At5g28300         <-------MYC3 ---->DOF2             --------->HSFB2a(2)       <----------DOF2          <---------ATHB12<---------ANAC46 ----->AGL3  --------->GLK1(1)       ----------->HVH21   XXXXXXXXXXXXXXXXXXXX>MIR408 <---------O2   aggaaatcctcagtgatttctacttcttgaacccatagactgacccctatgctttctatgcaccgcctctgtcccaataaaatcgaaacgtggtttgtag  14798300                                                     --------->At4g35610                                                     <---------At4g35610                                                   <--------P                                                  <-------GAMYB                                                  <---------ANAC58                                                  <---------ANAC58                                                 <------MYB83                                                 <---------MYB46(3)                                                 <------MYB46(1)                                                 --------->MYB52(2)                                                 --------->MYB55(2)                                             <-----------RAV1(1)                                         --------->AHL20(2)                    <---------ZAT18                                         <---------AHL20(2)     --------->TOE1(2)<---------ANAC46 ---->At4g35610                         --------->AHL20(2)--------->LBD16      --------->ZAT18 -----At4g35610               --------->ATHB12  <---------AtMYB61        ------->TEIL   ctctcatgggaagttgaaggcctaatgctatctcattggagattaaattgttggttgctcccgataactacgacgaacttgtgccctgagatagaactat  14798400                                  --------->WRKY12                                  --------->WRKY38(1)                               -------->ATHB1                               --------->ATHB12                               --------->YAB1           <---------MYB52(1) <---------ATHB12                                      ---------->DOF2  --------->TOE1(2)           <---------YAB1                              <----------DOF2       -----  --------->TOE1(3)   --------->AHL20(2)    ------>ZmHOX2a(1)      --------->ARR11(3)  <---------At4g35610  --------->TOE2(3)--------->ATHB12<---------WRKY18(1)<---------YAB1   ------>ZmHOX2a(1)   --------->KAN4(2) <---------HSFB2a(1) <---------WOX13(1)<---------At4g35610       <---------TOE2(3)<----------DOF2  --   ggaaccttagacccttactcttgatttattctatcattgactgctccttatccagtctcattgtattaaggtcctcctttacacctttaagctcattcct  14798500                                             <------MYB46(1)                                             <------MYB83                            --------->At4g35610      --------->ANAC55(2)   <---------ZAT2  <---------MYB46(3)                 <---------AHL20(2)      <---------ANAC55(1)   --------->ZAT2 <---------WOX13(1)                 --------->AHL20(2)      <---------ANAC55(2)   <---------At4g35610                         --------->LBD16      --------->ANAC55(1) <--------P      <------------CBF              <---------At4g35610 ->ZmHOX2a(1) <---------ANAC58           --------->ATHB12          --------->At4g35610 ------->YAB1 <---------ANAC58    <---------MYB52(1)              ----------->ARR10              ----   agcatcatacgtattagcttgcaccatggtagctcccttgtgtcgattggtagtcattcggttcggattagctccgcttatataatatcgaaatttagat  14798600                                                                   <---------ZAT14                                                            <---------ANAC58                                                            >>>>>>>>CAMTA3                                                            <---------ANAC58                                                       --------->ARR14(2)                           -                                                     --------->ANAC58                             ---                                                     --------->ANAC46                  --------->ARR11(3)                                                     --------->ANAC58                  <---------ARR11(3)        <------------CBF                    ----------->GT1 <---------ANAC55(2)        --------->ARR14(2)    <-------TEIL                     --------->DOF5.7(2)--------->CCA1(2)              <---------ARR14(2) ----->AHL20(2)           <----------ID1 --------->ZAT6<---------ARR14(2)            --------->ANAC46   aaaatatacatattggattagaaagaatacgagaaaaccgtttacactgttaaacaagaaacgcgtgagtttacttcaacccattacaagatactaaaaa  14798700                                                                                              <------                                      ---------->DOF2                 <---------At4g35610     <------                                  ------>NtERF2                       <---------ZAT2          <------              --------->ANAC58 <------MYB46(1)                     <---------ANAC58       <----------       ---------->DOF2         <------MYB83                        <---------ANAC58  <---------ANAC58      --------->AtMYB61     <-------GAMYB                         --------->ZAT2     ----------->GT1     --------->ANAC46      --------->MYB111(2)                 <---------ANAC58      <---------ANAC55(2)   --------->REM1(1)       <---------MYB46(3)                  <---------ANAC58      <---------ANAC58  <---------ZAT14          <-----------RAV1(1)          <------ZmHOX2a(1)            <---------ANAC55(1)  --------->ZAT14          --------->MYB55(2)          ----------->HVH21             <---------ANAC46 -------->ANAC46           --------->MYB52(2)<----------DOF2  ------>NtERF2          --------->ANAC55(2) ------>ZAT6  --------->ANAC58 <---------MYB46(3)<----------DOF2  <---------ZAT2    <-------TEIL   acactacaccaaaggaacacaacttaagtttgttggtgcctaaagccctttctttacaggaccgggcctgcttgctgagttactgatacgtgaattgtgt  14798800         <-----------------AGL1         <-----------------AG         <-----------GT1  ------------>CBF                                                                        <----------DOF2 <-----------GT1                                                                          <---------DAG2 ---ANAC58        ------------>CBF                            >>>>>>>>>ARR2            <-----------GT1 ---ANAC46   <----------DOF2                                  >>>>>>>>>ARR1        <----------------- ---ANAC58  <---------DAG2                               <---------SPL7 <------------------------ANAC81 --CBF  <-----------GT1  <----------DOF2      <-------TEIL  <---------YAB1     ---------->ID1   <----   gttttacaattttcccttttggcaattcttttgggctcagttttgagtttcattttggacttacgattgttttttttttttgtttttttttacttttttt  14798900                                                      <---------ARR11(3)                                      <---------AHL20(2)                                      --------->AHL20(2)           ----------->GT1                                     --------->AHL20(2)           --------->DAG2                                     <---------AHL20(2)           <---------TOE2(3)    <---------AHL20(2)             --------->YAB1     --------->ARR11(3)  <----------DOF2                --------->AHL20(2)  --------->CCA1(1) -------ANAC81          <----------ID1--------->AHL20(1)          --------->MYB59                   < -------GT1           --------->At4g35610            --------->RVE1(1)                       --------   acttcttttattttgtaatagataagatgacaaaaaaaaataatttgtgccaaaaataccttcgtaataaggtagaatatttcggtctcacgagctaagg  14799000  Previous    Next  AGI:  At2g35080.1    Description:  ATP binding / aminoacyl-tRNA ligase/ nucleotide binding. similar to ATP binding / aminoacyl-tRNA ligase/ nucleotide binding [Arabidopsis thaliana] (TAIR:AT3G42723.1); contains InterPro domain Aminoacyl-tRNA synthetase, class II (D, K and N); (InterPro:IPR004364) Range:  from: 14796324    to: 14798527    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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