Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            ---------->DOF2                                     ----------->RAV1(1)                                 --------->WOX13(1)       <------ZmHOX2a(1)                               <------ZmHOX2a(2)        <---------TOE2(2)            ----------->RAV1(2)==================================HOX2a_HOX2a         <---------ZAT18      <---------ARR11(3)     <---------O2       --------->REM1(2)      --------->ARR14(2)     --------->ANAC46    <---------ANAC58          <---------ARR14(2)   ------->GAMYB    <---------ANAC58          --------->AGP1      --------->MYB46(3)    <---------ANAC46          --------->ARR11(3)--------->WOX13(1)                        ---------->DOF2 --->ZmHOX2a(1)         --------->YAB1  ------->GAMYB--------->O2              ---------->DOF2 ->ZmHOX2a(2)   <---------ANAC46<-------TEIL   <---------WRKY12      <---------ZAT6  ----------->GT1   ctattgccttgtacacctgtgtgaaatcacaagatccatcaacagaaagtcaaccacgtaggatgaaattagtgtccattgcaaagagagagaaaagccc  14771700                                       <---------ZAT14                                       --------->ZAT18                                       --------->ZAT14                                   <---------ICU4                                  --------->ICU4 --------->WOX13(1)                           <-------GAMYB    --------->ZAT14           --------->TOE2(3)    --------->YAB1  --------->MYB46(3)           --------->TOE1(3) ----------->GT1<---------ZAT18----------->GT1      --------->ARR14(2)   taaattgattcaaccttagtagaagactgcgttgtaataactgcagtgcatccatcaccaattgtgaattcacatgaaatcgaatcgccctacataattt  14771800                                                                                        --------->AtMYB61                                                                                      ------>NtERF2                                                                                      ----------->RAV1(1)                                                                                     <---------ALFIN1                                                                                     --------->DEAR3(1)                                                                                    <------NtERF2                                                                                    --------->ERF1                                                                                    --------->ATERF1(1)                                                                                   <---------ATERF1(1)                                                                                   <---------RAP2.6(3)                                                                                  --------->RAP2.3(2)                                                                                  --------->RAP2.3(3)                                                                                  --------->ANAC46                                                                                  --------->RAP2.6(2)                                                                                  --------->ATERF1(2)                                                                                  --------->DEAR3(1)                                             ---------->DOF2                      --------->bZIP60(1)           <---------WOX13(1)             --------->YAB1                          <---------ATERF1(2)    <---------ARR11(3)                 --------->TOE2(3)          --------->GLK1(1)------>NtERF2    -    --------->ARR11(3)               <-------TEIL              ----------->GT1   --------->RAP2.3(1)<   gaacaagaactagattgattcaagcgcatcgatggcaaattcattaataaagagacagagaaatagggaaatacagagacaatgccgccaccataagtga  14771900                                <---------ZAT2                                <---------At4g35610                                --------->At4g35610       <---------ARR14(2)                               --------->ARR14(2)         --------->ARR14(2)                               <---------ARR14(2)        <------NtERF2                              <------ZmHOX2a(1)       <---------LBD16                           <-----------RAV1(2)        <------NtERF2                          --------->ZAT2             ------>NtERF2                        <---------HSFB2a(2)          <---------RAP2.3(1)                        --------->HSFB2a(2)       <-----------HVH21                    <---------At4g35610          --------->ALFIN1                   <---------DEAR3(2)          <---------ANAC58                   --------->MYB52(2) ----------->HVH21 --------->LBD16                <-----------HVH21   <---------ANAC46<---------DEAR3(1)                --------->TOE2(3)--------->ATERF1(1)--------->ETT(2)          --------->ANAC46<---------ZAT2     --------->ZAT14 --------->TOE2(3)     <---------ARR14(2) <-----------RAV1(2)  <---------ZAT14 <----------DOF2 ----------->GT1     ---- --------->At5g28300--------->At4g35610 ---------->DOF2--------->ANAC46   --------->ATHB12    <------ ---------->GT1 <-----------TGA1--------->ZAT2 <---------ANAC58 --------->YAB1                ------- ---------ZAT6 --------->bZIP60(2) ------>NtERF2 <-----------RAV1(1)   ---------->DOF2        <------   tactgtaaatccagacaacgtcagttccagcaggagctgcctgaaagttcagtgtcgccggaactttaataactaaagattgaaaattcgaaactgtgaa  14772000                                                                                ------>ZmHOX2a(2)                                                                               =============HOX2a_HOX2a                                                                               <------ZmHOX2a(2)                                                                              <---------ARR11(3)                                                                <---------ZAT2--------->ARR14(2)                                                                --------->ZAT2<---------ARR14(2)                                                                --------->At4g35610     <---------ALFIN1                                                                <---------At4g35610  ------>ZmHOX2a(1)                                                        <---------HSFB2a(2)   <---------AGP1                                ----------->GT1         --------->HSFB2a(2)   --------->ARR11(3)    -                              <------ZmHOX2a(1)    --------->HSFC1(2)         <---------ARR14(3)    <                         <---------STY1(2)         <---------HSFC1(2)         <-----------ARR10     -                         --------->STY1(2)       <---------ARR14(2)           --------->ARR14(3)   -- ----->ZAT6         <---------ARR11(3)           --------->ARR14(2)    <---------At4g35610 <---------DAG2 ---ZAT14           <---------ARR14(3)          <------ZmHOX2a(1)      --------->At4g35610 <--------- -->ZAT14           --------->ARR11(3)--------->ARR11(3)<---------HSFC1(1)   <---------CCA1(2)   <--- ---ZAT18        <------ZmHOX2a(1)    <---------ARR11(3)--------->HSFC1(1)  ----------->ARR10    ----   ctctacgtagagagagagaggagaccttgctaggaagtaagaacttgagaggatacttcgagaagcagctcgtagctgtagatcttcctcccactttctc  14772100               --------->ETT(2)            <-----------RAV1(1)            <---------ETT(2)          ----------->RAV1(2)              <---------ANAC46      <---------DAG2                     <-----------HVH21   <---------ALFIN1                     <-----------RAV1(1)                                     <---- -------->DEAR3(1)                   <---------ALFIN1                                           <---- ---------ALFIN1------>NtERF2       <---------ZAT14        <---------ZAT14            <---------AHL20(2) -------->AtMYB61           ------>ZmHOX2a(2)     <----------DOF2                  <---------ARR11(3) ------->MYB46(3)<------NtERF2      --------->ZAT14      --------->ANAC58          <---------AHL20(1) -DOF2<----------DOF2      --------->GLK1(1) <------NtERF2 --------->ZAT14         --------->ARR11(3) ------ALFIN1  <---------ETT(2)    <---------ALFIN1      --------->ANAC46          --------->AHL20(1) ----->ANAC46<-----------HVH21    <---------REM1(2)      --------->ANAC58  --------->ICU4      <-----   caccaccactttccctgtcgccatctctgatctctctccacactgtcgtcgactttctcactccagtttgagtagaaatgttgaatattttatatgcaaa  14772200                                    ----------->GT1                            <---------YAB1                          --------->CCA1(2)          --------->HSFB2a(2)       <---------ANAC58                                --------->YAB1          <---------HSFB2a(2) --------->ARR11(3)                    <---------At4g35610         <---------LBD16 <---------ARR11(3)                         --------->At4g35610       --------->GLK1(2) --------->ARR11(1)          <---------AHL20(2)   <---------TOE2(2) -----ARR14(2)           --------->ARR11(3)  ----------->GT1   <------ZmHOX2a(1)   <---------ATHB12 - -------ARR10        ---------->DOF2<---------ANAC58 --------->AHL20(2)   <---------TOE1(2)         - ----CCA1(2)  <---------REM1(1)     <---------ANAC46--------->AHL20(2)   <-----------RAV1(2)        -   tctcatcagtttctggatgtagagaaagatatgattttgggtgaaaaatgtcaaatttataagtaggaacagctctcaggttctaatcatacataaactc  14772300                                                           <------MYB46(1)                                                           <------MYB83                                                          <---------MYB46(3)                                                       <------MYB83<<<<<<<<<TBF1                                                       <------MYB46(1)                                                       <---------ANAC58                                                       <---------ANAC46                                                       <---------ANAC58                                                      <---------MYB46(3)              <---------TOE2(3)                       --------->MYB111(2)            <---------AHL20(2)               <------------------------ANAC81           --------->AHL20(2)            <----------DOF2 <---------ANAC46 ------------>CBF                   <---------ALFIN1  --------->MYB111(1) -------->ANAC58                <-----------GT1       <---------AtMYB61 -------->ANAC58    --------->REM1(1)  <---------DAG2 --------->MYB46(2) -------->ANAC46  <-----------GT1<-----------GT1      --------->MYB55(2)  <---------GLK1(2)   gaacgcaatccaaattaatgttacaacagttttatttcccactctttgtgttttgtttggtgggttttcttcttcagaaactctcttggatgtgtttata  14772400                                                                                          <---------ANAC46                                                                                    --------->YAB1                                 --------->GLK1(1)                                 <---------ATHB12                                --------->ARR14(2)                                --------->ANAC58                                <---------ARR14(2)    --------->At4g35610         --------->ANAC58                               <------NtERF2  <------MYB46(1)                    --------->WOX13(1)                              --------->LBD16 <---------MYB46(3)               <---------At4g35610                             <---------ANAC46 <------MYB83             --------------->AGL15                            <---------LBD16  <---------DEAR3(1)        <---------DAG2     <---------ANAC58                     --------->TOE2(3)   <---------TOE2(3)             <----------DOF2    <---------ANAC58    <---------ARR14(2)------>ZmHOX2a(1)  <---------TOE1(3)             <---------------AGL15   agagcaaaactggagggatgtgtccttaatggcggaaatgtctaacgttggtgaagagcagagagactccatactttttgcagcaatcaatagcgtcttg  14772500                                                                         <---------At4g35610                                                               <-----------ARR10                                                --------->ANAC46         --------->At4g35610                                                --------->ANAC58         <---------ZAT2                      <---------At4g35610       --------->ANAC58  <----------DOF2                  --------->ARR14(2)        <-----------HVH21  <---------ARR11(1)   --------->ANAC58                  <---------ARR14(2)     --------->ZAT2        ------->TEIL         --------->ANAC58                 <---------GLK1(2)  <-----------------AGL1 --------->ANAC46         --------->ANAC46               --------->LBD16     ----------------------->TaNAC69(2)   --------->ANAC46              <-----------RAV1(2)------>ZmHOX2a(1)       <---------ALFIN1--------->ZAT2   -----------            ------>NtERF2  --------->ZAT6----------->RAV1(2)--------->DEAR3(1)    <-----------GT1  --   gtctctaatactgcctccaggttctgctatcactcctattcccatctggcacgcctcttccaccgcatctttccaagctgcaattcacacaacaacaaat  14772600  Previous    Next  AGI:  At2g35035.1    Description:  URED (urease accessory protein D); nickel ion binding. similar to unnamed protein product [Vitis vinifera] (GB:CAO41951.1); contains InterPro domain Urease accessory protein UreD; (InterPro:IPR002669) Range:  from: 14770461    to: 14772124    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g35040.1    Description:  AICARFT/IMPCHase bienzyme family protein. similar to phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [Nicotiana tabacum] (GB:AAG40879.1); similar to putative aminoimidazolecarboximide ribonucleotide transformylase [Oryza sativa (japonica cultivar-group)] (GB:BAD11555.1); similar to aminoimidazolecarboximide ribonucleotide transformylase/inosine monophosphate cyclohydrolase [Vigna unguiculata] (GB:AAO40252.1); contains InterPro domain MGS-like (InterPro:IPR011607); contains InterPro domain AICARFT/IMPCHase bienzyme; (InterPro:IPR002695); contains InterPro domain AICARFT/IMPCHase bienzyme, formylation region; (Inter Range:  from: 14772239    to: 14775367    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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