Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           --------->ALFIN1         <---------AtMYB61       <---------ANAC58       <---------ANAC58       <---------ANAC46       --------->ALFIN1                                                                     ---------     <------MYB83                                                                         --------->MYB52(1)     <---------MYB46(3)                                                                 =============     <------MYB46(1)                                                                    ------>ZmHOX2a(2)    --------->ALFIN1                                                                    --------->MYB46(3)    <---------DEAR3(1)                                                                 ==============    <---------AtMYB61             --------->ANAC58                                     <------ZmHOX2a(2)   <---------ABI4(1)              --------->ANAC58                                    --------->ARR14(2) --------->LBD16                  --------->ANAC46                                    <---------ARR14(2) ---------ANAC55(1)              --------->SPL7                                 --------->ALFIN1 ---------ANAC46           <---------ARR11(1)                                   <---------ANAC58 ---------HSFB2a(2)        --------->GLK1(2)                                    <---------ANAC46 ---------ANAC58           <---------ARR14(2)                                   <---------ANAC58 ---------LBD16            --------->ARR14(2)                      ---------->DOF2   <---------PCF2 ---------ANAC58          <---------ARR14(1)                 ==================================HOX2a_HOX2a --------LBD16          <---------MYB59                      <------ZmHOX2a(1)  <-----------RAV1(1) ---RAV1(1)         ----------->HVH21                        =================================HOX2a_HOX2a   ttccgggtggtgtggtctgagtctgaccgaatccatacggtactgactggagcaagagcaagaggagaagaaagagaaggttgtgtgggatccaacggct  14760000                            <------ZmHOX2a(2)               --------->ANAC58               ------>ZmHOX2a(2)               --------->ANAC58             <---------ARR14(2)             --------->ARR14(2)            <------ZmHOX2a(1)              --------->ALFIN1                                    <-----        <---------ANAC46   <---------ARR11(3)                                                 <------ <----------DOF2           --------->ARR11(3)                     ----------->GT1             <------ >MYB46(3)  =======================HOX2a_HOX2a                  <---------ANAC46              <------ ==================HOX2a_HOX2a         ---------->DOF2       <---------AtMYB61   --------->ETT(2) ==================HOX2a_HOX2a   <---------SPL7     ---------->DOF2              <---------ETT(2)   ggactttgtgtcgaggatcgccatttgaagatcatcgtatggaaagtggagaagaaaagggttttggtgtgaaaaatataaggtcgatagagagagtcaa  14760100                                                  --------->YAB1                                          <------------AtMYB77                                        --------->ARR14(2)                                     <---------ANAC55(2)                                     <---------ANAC58                       <---------REM1(1)<---------ARR14(2)   <---------ANAC46      ----------->GT1  --------->ALFIN1 --------->MYB52(1)   <---------ANAC58      <---------AHL20(2) ----DOF5.7(2)   --------->ANAC46    <---------ANAC58        <---------ANAC58   <---------AHL20(1) ---WRKY12  <<<<<<<<<<GATA-1         --------->ANAC55(2)  <-------PIF5          --------->AHL20(1) ---WRKY38(1)   <---------LBD16      <---------ANAC46     ------->PIF5       --------->YAB1   ------- ---WRKY45 --------->GLK1(1)    --------->ATHB12 <------ZmHOX2a(2)        --------->YAB1 ----------->GT1   cgtctggtttgtgaaatccacggaggtgtaagagtcattgcgtaactgtggatcatagcacttgcttattgtttattgataatattttttttagttaaaa  14760200                  ------>ZmHOX2a(2)    <---------AHL20(2)              <----------DOF2    <---------AHL20(1)       <----------DOF2    --------->AHL20(1)   <---------ALFIN1                         <----------DOF2       <---------ALFIN1    --------->AHL20(2)--------->ZAT14                          ---------->ID1        --------->ZAT6   --------->AHL20(2) <---------ZAT18                       --------------->AtSPL8 <-----------GT1 --->DOF2<---------AHL20(2) <---------DAG2               <----------DOF2      <------ZmHOX2a(1)------   gggaattttatttgatttgatctgttcacaccttttgactttgaagaagtctagtgtgtctttttgtacttttacaactaggaaataacaccacttctaa  14760300                                                                                ------>ZmHOX2a(1)                                                                       --------->AHL20(2)                                                  <---------YAB1       <---------AHL20(2)                                                --------->ATHB12   --------->AHL20(2)                                                -------->HAHB4     <---------AHL20(2)                                                <---------ICU4    --------->AHL20(2)                                   --------->GLK1(2)----------->GT1<---------YAB1                   -                     <---------------AGL15     <---------ATHB12   <---------AHL20(2)                -       <----------DOF2        ----------->HVH21--------->ICU4  --------->ARR11(3)                   < ---->DOF2--------->ZAT6   <---------ZAT6      <---------YAB1  <---------ARR11(3)                 *TSS   agatgaaaactttcactactatacaattagtggtgacaatctcttagaaatgattagtatatagagattttaattaaaaatcctaacaattgtttttgag  14760400             --------->ARR11(3)             <---------ARR11(3)            <---------CCA1(2)                  ----------->GT1                                  -----     ----------->GT1                <----------DOF2                                        ---------- <---------AHL20(2)              --------->GLK1(2)                                      --------->TOE2(3) -------->YAB1                   --------->ARR11(3)                            --------->ARR11(3) -------->AHL20(2)               <---------ARR11(3)                        ------>ZmHOX2a(1)<-------- ---------AHL20(2)               <-----------ARR10            <---------TOE2(3)<---------ARR11(3)   aattatatggtgatatatcttatctaaaacttcaaaatcttttctaaatgagttaatataagctaatgttttgactcctaacatcttatacattaaagtt  14760500                                                                <---------AHL20(1)                                                                --------->AHL20(1)                                                                --------->AHL20(2)                                                       --------->YAB1                                                     --------->ANAC55(2)                                            ------>NtERF2<---------YAB1                                            --------->LBD16     <---------AHL20(2)                                          ------>ZmHOX2a(2)  --------->YAB1                      --------->ZAT14   <---------ARR14(2)  <---------YAB1 ---->GLK1(2)         <---------ZAT14   --------->ARR14(2)--------->YAB1                          --- >DOF2          --------->TOE2(3)  <-----------GT1<---------ATHB12  ----------->GT1        --------->YAB1 -TOE2(3)   <---------------AGL15  --------->MYB52(1)<---------ANAC55(2)                   <---------ICU4   tctgagataaatctctattcttagtaaactaaactaataactgatccgcctaatcaagtatcataataaattgcaaaattttctaatgcagaatcatcac  14760600                                                                                                  ---                                                                                                 ----                                                                                                 <---                                                                                               ------                                                                                               <-----                                     --------------->AGL15                                    <------                                     <---------DAG2     <-------TEIL --------->ANAC46         <------                                     <----------DOF2   --------->CCA1(2)      ---------->DOF2 -------                               <----------DOF2  <-----------RAV1(2)  --------->ANAC58       --------- -------->GT1      <---------YAB1 <-----------GT1  <------ZmHOX2a(1) --------->ANAC58    ----------->RAV1(1)   aagttaaatttttgggtttttatgtttagtcttcttttactttttatattacaggagatacaatagtttacacgaagcctgaaagtgattccaacaataa  14760700 ------>YAB1                         --------->ANAC55(2) ------->GT1                         <---------ANAC58 ------YAB1                          <---------ANAC58 --->YAB1               <---------YAB1    <---------YAB1 ----ICU4      <---------ZAT2   <---------ICU4         --------->ANAC46 ---ATHB12     --------->At4g35610   <---------ANAC55(2)                                  ----------- ---ATHB51     XXXXXXXXXXXXXXXXXXXX>MIR779.1           --------->ANAC58                 <---------TOE2(3) -->ICU4       --------->ZAT2--------->YAB1  <---------YAB1                             <---------YAB1 >YAB1         <---------At4g35610 <-----------GT1     --------->ANAC58                <<<<<<<<<<<<<<   tgaaaattagaaatttcagctgtgttattactcatagttacttgatgatcaataaccaagacatctaatatagaataggcatccaaaattaacattggac  14760800                                                                                            <--------                                                                                            ---------                                                                                           <---------AtMYB61                                                                                     <---------AHL20(2)                                                                                    <---------AHL20(2)                                                                                 <--------ATHB1                                                                                 --------->YAB1                                                                                 <---------ICU4  <---                                                                                 <---------AHL20(1)                            --------->TOE2(3)                                    <---------AHL20(2)                    ------->TEIL            ---------->DOF2                      --------->AHL20(2)--                 <---------ANAC46        --------->TOE1(3)                      <---------ATHB12<----                 ----------->GT1         --------->TOE2(3)                      <---------ATHB51<---- ---------->WRI1 <---------ANAC55(2)     --------->YAB1              --------->YAB1 --------->AHL20(2) <<<LFY         <---------TOE2(3)  <---------HSFB2a(2)    --------->ZAT6        --------->ICU4<------   aattcgtatatatgatataacgtatataaaacttaatctcgaaccataaaacgagtattatctctaaccatttataaatctaataattttatggtggtag  14760900  Previous    Next  AGI:  At2g35000.1    Description:  zinc finger (C3HC4-type RING finger) family protein. Identical to RING-H2 finger protein ATL2G precursor (ATL2G) [Arabidopsis Thaliana] (GB:O64763); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT2G34990.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61662.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 14758653    to: 14760398    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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