Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          <---------ARR14(2)                                                                                        --------->ARR14(2)                                                                                      --------->LBD16                                                                                     <---------ANAC55(2)                                                                                     --------->HSFB2a(2)                                                                                     <---------ANAC46                                       --------->ANAC58                              <---------HSFB2a(2)                                   <-----------TGA1                                  --------->ANAC55(2)                                   <-----------HVH21                              <---------ARR14(2)                                  --------->ANAC58                                --------->ARR14(2)                                  <---------TGA1a                               --------->LBD16                                  <---------O2                                ------>ZmHOX2a(2)                                  --------->TGA1a                             <---------LBD16                                  --------->bZIP60(2)                        --------->ARR14(1)                                  --------->ANAC55(1)                        <------ZmHOX2a(2)                                  --------->ANAC46                           --------->CCA1(2)                                  --------->ANAC58                          --------->AGP1                                  --------->O2                              <---------ARR11(3)                                <---------ALFIN1                            --------->ARR14(2)     <---------WRKY18(1)       <---------WRKY45                             --------->ARR11(3)    ----------->HVH21          <---------WRKY12                             <---------ARR14(2) --------WRKY18(1)             <---------WRKY38(1)                          <---------ARR14(3)    <-- ------>WRKY12          ------>ZmHOX2a(1)                             <---------HSFB2a(2)         <-- -------->HVH21        <---------YAB1  --------->ANAC58           <---------GLK1(2) <---------LBD16 ------>WRKY45    <---------MYB46(3)   --------->ANAC46<---------ANAC58     --------->ARR11(1)   <--- ------>WRKY38(1) <---------DEAR3(2)----------->HVH21  <---------ANAC58     --------->ARR14(3)   ----   ttgaccatgaccgagacggtctgttcctattggtccacgtcacaccatcaaacaaatgcgagtttgtagattctacaagatccggttccggattcaagta  14757800                                              <-------MYC2                                              ------->MYC2                                              ------->MYC3                                ----------->RAV1(1)                               ----------->HVH21                               --------->TGA1a<-------MYC4                               --------->O2   <-------PIF5                               --------->ANAC46                               ========================bZIP_bZIP                               --------->ANAC58   <---------ANAC58                                 <-                             <---------ALFIN1 <-------MYC3                                         <-                             --------->ANAC46 ------->MYC4                                         --                           <---------ALFIN1   ------->PIF5                                   ------->MYC4                         <------ZmHOX2a(2)   <---------O2                                    <-------MYC4                        --------->AGP1       --------->TGA1a                                 ------->PIF5                        <---------ARR14(2)   <---------ANAC46                                <-------MYC3                        --------->ARR14(2)   --------->O2                                    <-------MYC2                    ---------->DOF2     --------->ZAT14                                      <-------PIF5             <---------MYB46(3)--------->ANAC58--------->ALFIN1                              ------->MYC2           <-------GAMYB--------->ARR11(3)   <---------ANAC55(2)                             --------           ==============================MYC_MYB  <---------ANAC58                           ------->MYC3           ============================================MYC_MYB                              ---------          --------->LBD16--------->CCA1(2)   <---------TGA1a                                ---------        <---------LBD16 <---------ARR11(3)  <-----------------------TaNAC69(2)              <--------    ----------->HVH21 ----------->ARR10 <---------ZAT14                                     --------- -------ANAC58      =====================bZIP_DOF <---------ANAC46                          <-------- -------ANAC58      ===================================bZIP_DOF                             --------- ------HSFC1(2)  --------->ANAC58       <---------ZAT18                                     <-------- ----->HSFC1(2)  --------->ANAC58       --------->ZAT18                         --------->YAB1-------   gcttctctcacccggttgtaagcaaagatccacacgacagagtggacacgtggagtgatcagagagccagacacttacacaatcagcatgaaacacgtgg  14757900                                                                   <---------ALFIN1                                                                   --------->DEAR3(1)                                                                 ------>NtERF2 <-----------ARR10                                                                 <---------ATERF1(1)                                                                --------->ANAC58                                                                --------->bZIP60(2)                                                             ----------->HVH21<---------GLK1(2) -----NtERF2                                             <---------ALFIN1     --------->ARR14(2) --------At4g35610                                      --------->ZAT14       <---------ARR14(2) ------->At4g35610                                      <---------ZAT18 ------>MYB83 >ABF1                                                <---------ZAT14   <---------ARR14(2) >TGA1a                                               --------->ZAT14   ------>MYB46(1)        ------ >ANAC46                                              <---------ZAT18 --------->AtMYB61     --------- -O2                                                --------->ANAC46------>NtERF2         ------>ZmHOX2a(1) >O2                <---------ANAC58              --------->ANAC46--------->ATERF1(1)     <---------- -TGA1a             <---------ANAC58          --------->CCA1(2) --------->bZIP60(1)  --------->At4g35610 >ANAC55(2)    --------->ANAC46              --------->ARR14(2) --------->ANAC58     <---------At4g35610 -ANAC55(2)  --------->MYB52(1)              <---------ARR14(2) --------->ANAC46 <-----------GT1   -- -->ALFIN1 --------->MYB46(3)<---------ARR11(3)<-------TEIL--------->ANAC46 --------->LBD16 <--------   cagcattcaggcatcaaacggagcgtttcatggtcttcgaactcacagatacacactgcacactcgacgccacctatcccgattctccgctccttcacct  14758000                                                        --------->At5g28300                                                       --------->RRTF1(3)                                                       --------->RAP2.3(2)                                                       --------->RRTF1(2)                                                       --------->RAP2.6(2)                                                     ------>NtERF2                                                     --------->ABI4(1)                                                    --------->DEAR3(1)                                                    --------->DREB2C(2)                                                    <---------ALFIN1                                                   --------->DEAR4(2)                                                   --------->DEAR3(2)                                                   --------->MYB46(3)                                                  <---------ATERF1(1)                                                  ------->TEIL                                                 <---------ALFIN1                                                --------->MYB46(3)                                               --------->ANAC58                                               <---------ALFIN1           --------->TOE1(2)                   --------->ANAC46 --------->REM1(2)                             --------->ANAC58     --------->ANAC55(2)     --------- --->DEAR3(1)                               --------->DEAR3(1)   <---------SPL7           ----------- >REM1(1) <---------O2                     --------->DEAR3(2)  <---------------AtSPL3<-----------HVH21 -HVH21   --------->O2               <-----------HVH21--------->RAP2.3(1)          <------NtERF2   <- ------->LBD16                      --------->O2<---------MYB55(2) --------->SPL7<---------DEAR3(1)<- -ALFIN1 <---------HSFC1(2)<---------YAB1 --------->PCF2--------->LBD16        <-----------HVH21  <--   ccgagtagagaaacgtcggaaatgagttgatgatagcctcgtcgagcccacgcaccgccgtaatactcgtacgggattcaacgtcggagtcagtgaaagg  14758100                                                   --------->ANAC58     <---------GLK1(2)              --------->At4g35610 --------->ANAC58  <---------WOX13(1)                <---------At4g35610 --------->ANAC58                 <---------YAB1 ->DOF2       ----------->GT1       <---------LBD16--------->ANAC58                    --------->YAB1 >HVH21 <---------ANAC58          <-----------RAV1(2)   --------->ANAC46  <---------ANAC46  --------- --------MYB46(3)                <-------TEIL--------->MYB52(1)     <---------YAB1 <---------YAB1 --------AtMYB61         <---------ANAC58--------->ANAC58     <---------ATHB12    <---------KAN4(2) ------P<---------ANAC58 <---------ANAC58--------->ANAC58   --------->MYB52(1) ----------->GT1   gttgatggattcttgtgagtaaaattggcgagaggtccagcggaagcaaaccgaagccaagccaacgatgaagattgcgaagagtataatcgtgattact  14758200                 <----------DOF2                <---------ANAC46                <---------ANAC58            <---------ANAC58            <---------ANAC58         <---------ZAT14                        ------------>CBF       <------MYB83 <---------CCA1(2)<------NtERF2                  ------->GAMYB       <---------CCA1(1)       <------MYB46(1)               --------->ZAT18              <---------At4g35610   <---------RVE1(1)      --------->MYB46(2)             --------->At4g35610         --------->MYB52(1)    <---------ARR14(2)      <---------AtMYB61        <-----------RAV1(2)            --------->ANAC58         --------->ARR14(2)      --------->MYB111(1)   <---------ARR14(2)                --------->ANAC58     <---------LBD16  <---------ZAT6<---------ANAC58    <---------ATERF1(1)   <---------ANAC46 --------->ANAC58 >ICU4--------->MYB59       --------->ARR14(2)        --------->ATHB12     --------->ANAC58   agtagggttaggtcgcttgcttttatctcggttccaggctgcaccatcgtctcgcttgattcgtatgcaacggactgaagcaatactcggatatttctct  14758300                                                                   --------->WOX13(1)                                                                  <---------ICU4                                                                 <---------ATHB12                                                                 <---------YAB1                                                        <---------TOE1(3)             --------->ARR11(3)                         <---------TOE2(3)             <---------ARR11(3)  <---------AHL20(2)    --------->MYB52(1)       --------->YAB1  --------->ANAC58    <---------ANAC46      --------->ICU4     -------->P        --------->ANAC58 <---------TOE2(3) <------ZmHOX2a(1)  ------------>CBF    ----   caaaacttaccataagatttcatgaacgaaagtttttattttgtggtttagaaaaactaaggatgtaatcattcactctcacaattcttgtaagaggcat  14758400                                                                                              -------                <---------ARR11(3)                    <---------AHL20(2)           <---------ICU4                --------->AHL20(1)                    ----------->TBP             --------->ICU4               --------->CCA1(1)                  --------->AHL20(2)              <---------YAB1    <           --------->AHL20(2)                     <-----------TBP               --------->YAB1-------      --------->YAB1                          --------->AHL20(2)      <---------ANAC58        -------     <---------YAB1          <---------ARR11(3)   <---------AHL20(2)  <---------ANAC58   <---------ANAC58  --------->ICU4--------->ARR11(3)          <-----------TBP           <---------AtLEC2   <---------ANAC58 ------->GT1   --------->RVE1(1)<----------DOF2 <-----------TBP       <---------ANAC46  --------->At4g35610   ggaaattatcaaaaaaaatatcttatggctagacctttttttttttttttatatatataaaaaactaagttggcatgtagaaacataattagcttaccat  14758500                                                                                      <------MYB83                                                                                      <------MYB46(1)                                --------->ARR11(3)                                    <---------MYB46(3)                            <-------TEIL                                           <-------GAMYB                           --------->CCA1(2)                                      <---------MYB46(3)                          --------->ARR14(2)                                      <-----------RAV1(1)                          <---------ARR14(2)         ------>MYB83                 --------->MYB52(2)                  --------->ARR11(3)                 ------>MYB46(1)              --------->MYB111(2)  ------>MYB46(1) --------->GLK1(2)        <------ZmHOX2a(1)              <---------WRKY18(1)  ------>MYB83    <---------ARR11(3)      ----------->GT1        ----------->HVH21--------->MYB55(2) -->YAB1         --------->CCA1(1)       <---------TOE2(3)   <---------YAB1     <---------MYB52(1) ---------MYB59  --------->RVE1(1) <-----------TBP <---------MYB59        <-----------GT1 -->TOE1(3)    --------->AHL20(2)--------->CCA1(2)<---------ANAC55(2)    ----------->HVH21         -- -->TOE2(3) --------->AHL20(2)  <---------ARR11(3)--------->ANAC55(2)    --------->WRKY38(1) --------   aaccaaatttgaaataaaaaaatcttcagatacagatatatataaggaaaatacctaatgcatatgtttgacggtttgaccagtttgttggtttccacaa  14758600                                                             ------>MYB83                   <---------YAB1                          <---------MYB59       <---------TOE2(3)                                  --------->ANAC46 <---------------AGL15                           --------->AHL20(2)                              ---- --------------->AGL15                           <---------AHL20(2)       --------->WOX13(1)  ------- --------->GT1    --------->At5g28300           --------->YAB1         <-----------GT1        <------ ->LBD16 <------ZmHOX2a(1)    <---------YAB1   <---------YAB1------>MYB46(1)       ----------->GT1   atgcttaataaggaagtcactgtaattgcattttgatgggataagcgttattaaaataaaacccaactccatttatccatcaaatgtgtaaaacccatct  14758700  Previous    Next  AGI:  At2g34990.1    Description:  zinc finger (C3HC4-type RING finger) family protein. Identical to RING-H2 finger protein ATL2F (ATL2F) [Arabidopsis Thaliana] (GB:O64762;GB:Q4PSR9); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT2G35000.1); similar to RING/C3HC4/PHD zinc finger-like protein [Cucumis melo] (GB:AAO45753.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 14757339    to: 14758247    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g35000.1    Description:  zinc finger (C3HC4-type RING finger) family protein. Identical to RING-H2 finger protein ATL2G precursor (ATL2G) [Arabidopsis Thaliana] (GB:O64763); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT2G34990.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61662.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 14758653    to: 14760398    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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