Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            --------->ARR14(2)          <---------ARR11(3)                                      --------->At4g35610          <---------ARR14(2)                                   <------ZmHOX2a(1)   ---------->DOF2                                    ----------->RAV1(2) --------->HVH21                                      <---------At4g35610 ------At4g35610                                     --------->GLK1(2) ----->At4g35610                  <<<<<<<<<<<<<<<<<LFY--------->At4g35610                           < ----->ZAT2                     --------->YAB1     --------->HSFC1(2)                         >>>>>>> ------ZAT2                    <-------TEIL        <---------HSFC1(2)                      >>>>>>>>>TBF1 -->TEIL <---------CCA1(2) <-------TEIL      ---------->DOF2<------ZmHOX2a(1)           >>>>>>>>>TBF1   gctgacaaagtatatctgaaacaatgtgatacattcatacagtggctcaaagaagcatctgaggaggaagatgaagatgatgaagatgaagaagaagaag  14755600                                                                                         <----------DOF2                                                                             <---------WOX13(1)                                                                   <---------ALFIN1      <-----------  --------->MYB52(1)                                    <-------GAMYB     <---------YAB1 ------------ ---------ARR11(3)                                      <---------At4g35610--------->ATHB12 >>TBF1          ----------->RAV1(2)       <---------MYB46(3)     <------NtERF2       <---------AHL20(2)   aagataactgaattggtatacctgagttcgatggctctcaactagttgttcattatgcagttgatggcctcacattttgattgatcatttacttttaaga  14755700                              --------->GLK1(2)                             --------->YAB1                            <---------ATHB12                       --------->TOE2(3)                                   <----------DOF2                      --------->YAB1                                   <---------ARR11(3)                      <---------ICU4                          <---------ANAC58                     <---------YAB1                           <---------ANAC58      <---------MYB52(1)<---------YAB1                     <---------MYB52(1) ----AGL15           --------->ICU4   <-----------GT1     <-------GAMYB--------->ARR11(3)    <------- --->AGL15         --------->YAB1<----------DOF2         <-----------RAV1(1)                 --------   gctactctgttttttgttctgtcatcatcaataatctttttttcttcatgtcttctgttctgttgcttcatgagatactttctcatccacgagtttgctc  14755800                                                           <---------ATHB12                        <---------ANAC58                 --------->WOX13(1)                        <---------ANAC58               ------------>CBF              --------------->AGL15   ------->TEIL       <-----------GT1            <---------AHL20(2)                  <---------------AGL15 --At4g35610    <---------AHL20(2)              <---------YAB1          <---------DAG2 ->At4g35610    --------->AHL20(2)            <---------ICU4            <----------DOF2--------->AHL20(2)   acatgtatcgtttgatatataattttacttgagtactaaatctcttaatttttatttgccaattactccctctactttttcttatttcaaaaaatagcat  14755900                                                                                                  ---                                                                                                  ---                                                                                                  <--                                                                                                  ---                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                                                                  ---                  ------>ZmHOX2a(1)                                                               ---               ------>ZmHOX2a(1)                                                                  <--             =================================HOX2a_HOX2a                                         ---             ================HOX2a_HOX2a                                                          ---             ------>ZmHOX2a(2)                                                                    <--            ==================================HOX2a_HOX2a                                         <--            =============HOX2a_HOX2a                                                              ---            =================HOX2a_HOX2a                                                          <--            <------ZmHOX2a(2)                                                                    <---           <---------ARR11(3)                                                                    ----           --------->ARR11(3)                              ==========================================           <---------GLK1(2)                               <----------DOF2                      <----           --------->AGP1                             <---------MYB52(1)                       ------           --------->ARR14(2)                     ------->TEIL                                 ------           <---------ARR14(2)            --------------------->WRI1                 <------------CBF         ----------->ARR10               <----------DOF2  <---------ANAC58<----------DOF2 ------>ZmHOX2a(2)     <-----------GT1  ------>ZmHOX2a(1)------>ZmHOX2a(1)  <---------ANAC58===========================   cacaaattcactagatcctccttcctctcgattcaagcttcctctttggacgaatcgtttgctttcgcatccctcgctctaacttgaattgatcgaggtg  14756000        <-----------------AGL3        =========================================================================================MADS_MADS       --------->TOE2(3) -------->GT1                      --------->AtMYB61 ------>ANAC58                    <---------HSFB2a(1) -------bZIP60(1)                 --------->HSFC1(2) ------>ANAC55(2)                 --------->MYB46(3) -------ANAC46                    --------->HSFB2a(1) -------ANAC55(2)                 <---------HSFC1(2) -------ANAC58                  <---------GLK1(2) ------>bZIP60(1)               <---------ARR14(2) ------>TGA2(1)               --------->LBD16                                  ----------------->AGL3 -------TGA2(1)              <---------HSFB2a(2)                              --------->ANAC58 ------>ANAC58               --------->HSFB2a(2)                              --------->ANAC58 ------>O2                   --------->ANAC46                            <---------ANAC55(2) -------TGA1a                --------->ANAC55(2)                         <---------ANAC58 -------O2                   <---------ANAC55(2)                         --------->HSFB2a(2) ------>TGA1a               <---------LBD16                              --------->ANAC55(2) -------ANAC58            <---------ARR14(2)                             <---------ANAC58 --------------------TaNAC69(2) --------->ARR14(2)            --------->ARR14(2) ------->STF1             --------->GLK1(2)     --------->ANAC58         <---------HSFB2a(2)        < =======bZIP_DOF          --------->ARR14(2)    --------->ANAC58        <---------LBD16             - -----TGA2(2)       ------>ZmHOX2a(2)         ---------->DOF2<------NtERF2--------->LBD16 ---------->DOF2 ----->TGA1        <------ZmHOX2a(2)   ------------>CBF     --------->LBD16----------->HVH21       -- ----->HVH21      --------->ARR14(2) ------>MYB46(1)       --------->DEAR3(1)--------->PCF2       <-- =======bZIP_DOF  <---------ARR14(2) ------>MYB83         <---------LBD16<---------LBD16 <------ZmHOX2a(1)   acgtaagaaccctaattttggatccaagaatccggaacctccccaatggaaagtaatctcgccggagactcaattccgggacccaaatggaggaaagtag  14756100                                                                                      --------->TGA1a                                                                                      <---------O2                                                                                      <---------TGA1a                                                                                      ----------->GT1                          ------>NtERF2                               --------->ANAC58--------->ANAC55(2)                    --------->CCA1(2)                                 --------->ANAC58--------->O2      <------ZmHOX2a(1) <---------------------WRI1                    --------->ANAC46<---------ANAC58 ---------LBD16    --------->ARR14(2)                    --------->ARR14(2)           <---------ANAC46 -------->SPL7<---------ARR14(2)                         <---------ARR14(2)           <---------ANAC55(2) ------->MYB52(1)  <---------ARR14(2)              ------>ZmHOX2a(1) ------->TEIL     <---------ANAC58 -------SPL7  --------->ARR14(2)           ------->TEIL <------ZmHOX2a(1)        <---------ZAT6   cctacggaggaatgcaaatcggatacgacgacaattacacagacgaatcgttcctcgaggaaatggtgatgaacgcaaacgtagtgagacgtgatttgct  14756200                                                        <---------ZAT6            --------->GLK1(2)                     <----------DOF2                    <---------YAB1     <---------YAB1                        <-----------HVH21         <-------TEIL  --------->YAB1   caaggtgatgaaagactctgtctcaatctcccaatacctctgcatcgtcgcgcttgtagtcttggtttgggttcacactcttgaatcatctttggacgag  14756300                                                    ------>ZmHOX2a(1)                                                <-----------GT1                                         --------->TOE2(3)                                      <---------ARR14(2)                                      --------->ARR14(2)                                       <-----                  ==========================HOX2a_HOX2a                                        ------                <---------ARR11(3)    <---------GLK1(2)                                 ------>ZmHOX2a(1)    <---------DAG2------>ZmHOX2a(2)  <------ZmHOX2a(1)     ------->GAMYB     <----------DOF2 <-------    <----------DOF2               <-----------RAV1(2)   --------->MYB52(1) <---------YAB1    <-------   aactcgcttttgctacttgatctctctctcttagcatcaggattcttaattctcctcttaaccgaagaaaaaatgttatctttgagtctcctcttgcgtt  14756400                                                                                 <---------GLK1(2)                                                                           --------->ZAT2                                   --------->ARR11(3)                      <---------At4g35610                        --------->ANAC58                                   --------->At4g35610                        <---------O2                                   <-----------HVH21                        --------->ANAC58 --------->ZAT2               --------->WOX13(1)                        --------->O2 --------->TOE2(3)         --------->ANAC55(2) <-------TEIL        <---------ARR11(3)         <---------ARR11(3)          <---------ANAC55(2)--------->ARR14(1)        --------->ARR11(3)    <----------DOF2     <-----------GT1   <------ZmHOX2a(2)  --------->CCA1(2) ----MYB52(1)           --------->ANAC46 <---------At4g35610   --------->ANAC46  --------->ARR14(2) --->DOF5.7(2)         <---------LBD16   <---------ZAT2        --------->ANAC58  <---------ARR14(2) --ANAC58             <---------ALFIN1   --------->At4g35610   --------->ANAC58----------->ARR10 --ANAC58     ------>ZmHOX2a(1)   <---------CCA1(2)     <---------GLK1(2)  <---------ZAT2   acctcgtcaacatctccttcttcaccacgggactttatatcttagctccgatttaccagactctcacgcgatctatcagctcagattcgatatgggcagt  14756500  Previous    Next  AGI:  At2g34970.1    Description:  eIF4-gamma/eIF5/eIF2-epsilon domain-containing protein. similar to eIF4-gamma/eIF5/eIF2-epsilon domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G02270.1); similar to eIF4-gamma/eIF5/eIF2-epsilon domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G18300.1); similar to Os02g0812400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048478.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ74618.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48128.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Nucleotidyl transferase; (InterPro:IPR005835 Range:  from: 14753386    to: 14755860    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g34980.1    Description:  SETH1; transferase. similar to hypothetical protein [Vitis vinifera] (GB:CAN83130.1); contains InterPro domain Phosphatidylinositol N-acetylglucosaminyltransferase; (InterPro:IPR009450) Range:  from: 14756046    to: 14756957    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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