Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 <---------ARR14(2)                          ------>NtERF2                         --------->RRTF1(2)                                      --------->GLK1(1)                         --------->RAP2.3(2)                             ----------->RAV1(1)                         --------->RAP2.3(3)                            --------->MYB46(3)          -                         --------->DEAR3(1)                            ------>MYB83                --                         --------->RAP2.6(2)                           ------>MYB46(1)           <---           <---------ZAT14--------->LBD16                            --------->MYB46(3)          <---           --------->ZAT14<------NtERF2                              <---------MYB55(2)          <---        <---------ANAC58<---------LBD16                            --------->MYB52(1)            <---        <---------ANAC58--------->RAP2.3(1)                       --------->AtMYB61              <---    --------->KAN4(2) --------->ANAC58                     ---------->DOF2       <---------GLK1(1)---   <----------TaMYB80 --------->ANAC46               --------->CCA1(2)--------->ANAC58       --------   <---------KAN4(1)  --------->ANAC58              --------->ARR14(2)--------->ANAC46       <-------   --------->KAN4(1) ------->TEIL               --------->LBD16  --------->MYB46(3)          <------- --------->GT1 --------->ICU4  --------->ARR14(2)   <---------ARR14(2)--------->ANAC58       --------   gaagtatattccctgcagtgatgaacgccgcaaaatccccaagctcaatccgtagataggcgaaagaaccaccagccacagggatttccacagcgaattc  14752600      --------->At4g35610     XXXXXXXXXXXXXXXXXXX>MIR157D   <---------At4g35610   --------->At4g35610   XXXXXXXXXXXXXXXXXXXX>MIR157A-C -------->REM1(2) ------->ALFIN1 ------ANAC58 ------ANAC55(1) ------ANAC46 ------ANAC58 ------ANAC55(2) ------>LBD16                                                                                  ------ ->GLK1(1)                                                          <---------ANAC58           ------ --ARR14(2)                            ----------->RAV1(1)          <---------ANAC58       <--------- --GLK1(1)                    <---------ARR11(3)  --------->ANAC58 --------->ZAT2     <---------WRKY18(1) ->ARR14(2)               ---------->DOF2         --------->ANAC58------>ZmHOX2a(1)  ----------->HVH21   cgtgtagcagaagacagagagcatagcagaaagacctgaaacaacataagacaagacaatagctggtcctgcttgctcatgagcttcttgacctgtcaag  14752700                      ------>MYB46(1)                    ----------->HVH21                    <---------MYB55(2)                    <---------MYB46(2)                    --------->MYB46(3)                    --------->DEAR4(1)                    --------->DEAR3(1)                   --------->DEAR3(2)                <---------ATHB12                --------->MYB46(3)         <---------ZAT2         <---------At4g35610--------->ARR14(2)         --------->At4g35610<---------ARR14(2)    --------->GLK1(2) ------>MYB83                                       <---------ANAC58<---------ANAC58  --------->HSFB2a(1) -------->P                                 <---------MYB52(1)      <---------ANAC58 --->ANAC58     <---------MYB55(2)                          <---------ALFIN1  <---------ZAT18 ------- --->ANAC58   --------->WOX13(1) --------->ANAC46          --------->MYB46(3) --------->ZAT18 <------ --HVH21 --------->ZAT2     --------->GLK1(2)         <-----------HVH21  <---------ANAC58<---------ANAC46   acaaagattccagctccaatcaccgacccgaatccaaaccatactaaatcccaccatgtcaaacaccgtttcatctcgtgctcactctgtttcttgagct  14752800                                 ------>MYB83                                 ------>MYB46(1)                                 -------->P                               ------->GAMYB                                        --------->AtMYB61                              <---------MYB55(2)                                  -------->P                              <---------MYB52(2)                                --------->MYB46(3)                         ------>MYB46(1)                                        <---------MYB111(2)                         ------>MYB83                                           <---------MYB52(2)<--                       <---------MYB59                                          <---------MYB46(2)---                 --------->At4g35610           --------->TOE1(2)                <---------MYB111(1)<-            --------->YAB1<---------MYB52(2)   <---------LBD16         --------->ZAT2       <-------- --------->MYB46(3)  --------->AGP1           ----------->RAV1(2)      <---------ZAT2---------->DOF2 -->At4g35610  <---------ICU4 --------->MYB46(3)                       <---------At4g35610  --------- ---At4g35610  --------->YAB1-------->P      ------->TEIL              --------->At4g35610 <---------LBD16   caaaccgctcgttctcatcatcagacctactaaccaacctgttcttgaacctggaacatgtctgagacagagcagctctgtaactaccaaagctctggaa  14752900              --------->GLK1(1)              <---------GLK1(1)         ---------->DOF2        <------ZmHOX2a(1)     <-----------RAV1(2)     <---------LBD16                                   ------>MYB83    ------>ZmHOX2a(1)                                  ------>MYB46(1) -------HSFB2a(1)                         ------>ZmHOX2a(1) ------>HSFB2a(1)                     --------->ARR14(2)                    --------->ARR11(3) --------GLK1(2)                      <---------ARR11(3)                    <---------ARR11(3)   ---- -HSFB2a(2)--------->ANAC58           <---------ARR14(2)             <----------DOF2<---------TOE2(3) >HSFB2a(2)--------->ANAC58 <---------ALFIN1      <-----------GT1  --------->At4g35610        -------   agattcctcaggaaagaaatctctcttgctccatctccagtatcctctctcttcaccttccattctctctgcttcaaagatttgttaatgaagaagagct  14753000                                                                                                <----                                                                                 <----------DOF2-----                                                                      <---------ZAT2  ------>ZmHOX2a(1)                                                                      --------->ZAT2 --------->TOE2(3) ------>DOF2                                                          --------->At4g35610       ----- -->At4g35610      ---------->ID1       *TSS                          <---------At4g35610  <---------   aaagagacaccatctaattttgttccattgtttgactagtagaagtttcagacagtttttttgtatttttgcagcttccctgactttcctcaactttgtg  14753100                                        --------->TGA2(2)                                       <-----------HVH21                                      --------->ANAC58                                      <---------bZIP60(1)                                      --------->REM1(1)                                      --------->bZIP60(2)                                      --------->bZIP60(1)                                      <---------ANAC55(2)                                      --------->O2                                      <---------O2                                      ====================================bZIP_DOF                                      --------->ANAC58                                      --------->ANAC55(2)                <------NtERF2     ----------                              --------->ARR14(2)                       <---------ANAC46  <---------MYB52(1)                            ----------->ARR10                          <---------RAP2.6(2) <---------                    <---------ALFIN1  --------->TGA1a                  <---------ANAC58<---------ANAC58                 ------>MYB46(1)      --------->ANAC46           --------->ATHB12      <---------ANAC46 -----ZAT14      ------>MYB83 <---------GLK1(2)--------->YAB1   --------->ICU4      <---------MYB52(1) ---->ZAT18    --------->AtMYB61     <-----------STF1           <---------YAB1  <---------At5g28300 ---->ZAT14XXXXXXXXXXXXXXXXXXXX>MIR844*<-----------TGA1<---------YAB1  <---------ANAC58<---------ANAC58 -DOF2  --------->YAB1   ----------------------->TaNAC69(2)    <----------DOF2 <-----------GT1   tactgtccattcataaacctccccacttgttagatttgctacgtcaccttcataactctcattgtctttattggcgtcttcttaccgtttcgtttagtac  14753200                --------->YAB1                                         --------->AHL20(2)                <---------ICU4                                      --------->YAB1               --------->ICU4                                       ----------->GT1            <-------TEIL    --------->YAB1                         <---------YAB1     --------->AtLEC2       --------->ANAC55(2)                    ----------->GT1   --------->YAB1  --------->YAB1                           ----------->GT1                    <-----  <---------ATHB12<---------YAB1              <-----------GT1--------->At5g28300              ------- ----->AtSPL8  <---------YAB1            <---------DAG2   --------->At4g35610                 <------ ------AtSPL3--------->YAB1<-------TEIL  <----------DOF2--------->ZAT18<---------AHL20(2)------>ZmHOX2a(1)   ttcaaccatgaaaattcatgatgataacatacataattcagtgcttttttactcttagggggctgtaaaatgataaattgtcatattagtccttcagatt  14753300                                                                                      *TSS         ------->TEIL                                                                ================         <-------TEIL <----------DOF2                                                ================     <---------------AtSPL8                                                          <------ZmHOX2a(2)     --------------->AtSPL8------------>CBF                                    <-----------HVH21     --------->ARR11(3)   <-----------GT1                                      --------->LBD16 ---------->DOF2    ------>ZmHOX2a(1)                                  <---------ARR11(3) ----RVE1(1)   <-----------GT1              <-----------GT1            --------->ARR11(3) -->ARR11(3)  <---------AHL20(2)           --------->AHL20(2)          <---------GLK1(2) ---GLK1(2)  --------->AHL20(2)        --------->AHL20(2)   <---------LBD16  <---------LBD16   tttaaaagatgtacatttaatcctcttttctcaattcgtcataaattaacttcagtttatactcagggttttagattttcccgtgagatcgaatttgatc  14753400                                            --------->RAP2.3(2)                                            --------->DEAR3(1)                                           --------->ATERF1(1)                                           --------->RAP2.3(1)                                           <------NtERF2                                           --------->RRTF1(1)                                          --------->ABI4(1)                                          <---------ATERF1(1)                                          <---------RAP2.3(1)                                          ------>NtERF2                                         --------->DEAR3(1)                                         --------->RAP2.3(2)                                         <---------DEAR3(1)                                         <---------ATERF1(2)                                         --------->ATERF1(2)                                         --------->RAP2.3(3)                                         <---------ALFIN1                                         --------->RRTF1(3)                                         --------->RRTF1(2)                                        <---------ABI4(2)                                        <------NtERF2                                        --------->DEAR3(2)                                        --------->ORA47(2)                                        --------->RRTF1(1)                                        --------->ATERF1(1)                                        --------->DEAR4(2)                                        --------->RAP2.3(1)                                       --------->ABI4(2)                                       ------>NtERF2                                       <---------RRTF1(1)                                       <---------RAP2.3(1)                                       <---------DEAR4(2)                                       <---------ATERF1(1)                                       <---------ERF1                                       <---------ORA47(2)                                       <---------RAP2.6(1)                                      --------->RAP2.3(2)                                      <---------DEAR3(1)                                      --------->DEAR3(1)                                      <---------RAP2.3(2)                                     --------->RAP2.6(1)                                     <------NtERF2                                     --------->ATERF1(1)                                     <---------ABI4(2)                                     --------->RRTF1(1)                                     --------->DEAR4(2)                                     --------->ORA47(2)                                     --------->RAP2.3(1)                                     --------->ERF1                                    ------>NtERF2                                    <---------ATERF1(1)                                    <---------RAP2.6(1)                                    <---------DEAR4(2)                                    <---------RRTF1(1)                     <---------At4g35610--------->RAP2.6(1)                     --------->At4g35610--------->ERF1                     <---------ZAT14<---------RAP2.3(1)                     --------->ZAT18<---------ERF1                  <---------ANAC58  <---------ORA47(2)                                      ---------                  <---------ANAC58 <---------RAP2.3(2)                                      ---------              --------->CCA1(2)    <---------DREB2C(2)                            ------>NtERF2             --------->ARR11(3)    <---------DEAR3(1)                            --------->DEAR3(1)             <---------ARR11(3)    <---------RAP2.3(3)                     <---------GLK1(2)---------             --------->ARR11(1)    <---------RRTF1(2)                  <-------TEIL<------NtERF2             --------->ARR14(2)    <---------RRTF1(3)          <---------LBD16   <---------ALFIN1             <---------ARR14(2)    <---------RAP2.6(2)       <---------ARR14(2)----------------------           ----------->ARR10       --------->ALFIN1          --------->ARR14(2)<---------ATERF1(1)          <------ZmHOX2a(1)     --------->DAG2           <---------At4g35610  --------->ANAC58       <------ZmHOX2a(1)       ---------->DOF2 --------->STY1(1) --------->LBD16--------->ATERF1(1) ================HOX2a_HOX2a  ---------->DOF2 <---------MYB52(1)<---------ANAC46<------NtERF2 =============HOX2a_HOX2a --------->At4g35610------>NtERF2  <------ZmHOX2a(1) --------->ANAC58      <   agtgagagaggaggagatatgggtgctcagaagaaaggcggcgccgccgctagggtttcagaggatgcggaggtacagagtcgccaccgattgcaagcaa  14753500  Previous    Next  AGI:  At2g34960.1    Description:  CAT5 (CATIONIC AMINO ACID TRANSPORTER 5); cationic amino acid transmembrane transporter. similar to CAT8 (CATIONIC AMINO ACID TRANSPORTER 8), cationic amino acid transmembrane transporter [Arabidopsis thaliana] (TAIR:AT1G17120.1); similar to Os01g0209800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042365.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41927.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42080.1); contains InterPro domain Cationic amino acid transporter (InterPro:IPR015606); contains InterPro domain Amino acid permease-associated region; (InterPro:IPR004841); contains InterPro domain Amino Range:  from: 14751116    to: 14753040    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g34970.1    Description:  eIF4-gamma/eIF5/eIF2-epsilon domain-containing protein. similar to eIF4-gamma/eIF5/eIF2-epsilon domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G02270.1); similar to eIF4-gamma/eIF5/eIF2-epsilon domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G18300.1); similar to Os02g0812400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048478.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ74618.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48128.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Nucleotidyl transferase; (InterPro:IPR005835 Range:  from: 14753386    to: 14755860    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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