Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     --                                                                                                   <-                                                                                                <----                                                                                                -----                                                                                               <-----                                                                                         <---------ANAC55(1)                                                                                         <---------ANAC55(2)          <---------AHL20(2)                                                             <---------ANAC58        <-----------TBP                                                                  <---------ANAC58      --------->CCA1(2)   ------>NtERF2                <-------TEIL                      --------->ANAC55(2)     --------->ARR11(3)  --------->LBD16           ------->TEIL                          <---------ANAC46    <<<<<<<<<RAP2.2    <---------LBD16    <------------CBF         --------->AHL20(2)   <-------TEIL   acgtttagatatatatatgttcaaacgcggacatattagaccagcattgtatgtatatacatatacaaattgaatatatgtatacaaatatacgtgtata  14747100                                                                     --------->ZAT18                                                                  <------MYB83          --------->ANAC58                                        <------MYB46(1)          --------->ANAC58                                       <-----------RAV1(1)          --------->ANAC46                           ----------->GT1 <---------ZAT18       --------->ARR14(2)                           <-------MYC3 <---------MYB46(3)       <---------ARR14(2)                           ------->MYC3 <---------DEAR3(1) ------->TOE2(3)                       --------->ANAC46         <---------ANAC46 ---------DOF2               <<<<<<<<<EIN3         <---------ANAC55(1)       <---------TOE2(3) -----ARR11(3)  ----------->GT1        --------->ANAC58         <---------ANAC58 ---->ARR11(3) --------->ANAC58        --------->ANAC58         <---------ANAC58     <---------ZAT18 ----CCA1(2)   --------->ANAC58  --------->AHL20(2)--------->ANAC55(2) --------->ZAT18   tctttaacaaatacgacacggtttatatcaatgtataaaatacgaaaatggaaacgtgttattttggctggtgcgcattgaagttagtgcaaatcgatat  14747200                                                                                  ------>MYB83                                                                                  ------>MYB46(1)                          --------->ALFIN1                                       --------->ORA47(1)                        --------->ALFIN1                                        <---------MYB46(2)                    <---------ANAC46                    <---------AHL20(2)      --------->DREB2C(2)                    <---------ANAC58                    --------->AHL20(2)      --------->DEAR4(1)               --------->TGA1a                          <---------ICU4          --------->MYB46(3)               <---------TGA1a                     <---------MYB52(1)           --------->DEAR3(1)               <---------O2   <-------GAMYB      ----------->GT1      <---------AHL20(2)               --------->O2  <---------ANAC46<---------ALFIN1        <---------AHL20(2)        <-----               =======================MYC_MYB--------->AtMYB61   <---------AHL20(2)         <--------    <---------YAB1  <---------ANAC58         --------->ZAT6<-----------GT1     --------->DEAR3(2)  <-   ttgagcatcattcactcacatggctcgtgtggggttgtatttgactaccactcgttaattttttcattttttttatttaacaccgaccttcatttttctt  14747300                          <---------AHL20(2)                         --------->AHL20(2)                        <---------AHL20(2)                     --------->AHL20(2)                          --------->ARR11(3)                 <      --------->YAB1 <---------ARR11(3)                          <---------ARR11(3)            <-----     <---------YAB1  --------->AHL20(1)                         <------ZmHOX2a(1)             ------- -----DOF2           <---------AHL20(1)                       <---------TOE2(3)         <---------AHL20(2) ---GT1     --------->WOX13(1)                                <---------TOE1(3)        --------->AHL20(2) ---------DOF2 --------->YAB1       <----------DOF2   ------>NtERF2     ---------->DOF2<---------AHL20(2)   tctttctataatagcaattacaatattttaaattgggacttttaatgggctaatgaggcccattaaggatttttgaaagcctcccaaattttaattttaa  14747400                                                                                     --------->WRKY38(1)                   <---------MYB46(3)                                                ----------->HVH21                 <---------WOX13(1)                                                  --------->WRKY12               <---------ICU4                                                      --------->LBD16               --------->ATHB12                                                    --------->At4g35610               -------->HAHB4                                                      ----------->RAV1(2)               <--------ATHB1         --------->At4g35610                          <---------At4g35610              <---------AHL20(2)      <---------YAB1                           --------->ARR14(2)              <---------ATHB51      <---------ICU4                             <---------ARR14(2)              <---------YAB1        --------->YAB1                            --------->ZAT2          <---------MYB52(1)       --------->ICU4                             <---------At4g35610         <-------GAMYB           --------->YAB1                               <---------ZAT2    ----- -----------GT1--------->ATHB51  <---------ICU4             <---------MYB46(3)--------->At4g35610 ----AHL20(2) --------->ICU4    --------->ICU4  --------->TOE1(2)           <--------P------>NtERF2 -->AHL20(2)--------->YAB1    --------->YAB1   <---------HSFB2a(1)       <---------YAB1     ------>NtERF2   atttgcctctccgttaataattggttagagaacaataatcatcagagaaacattcgaaacagtagttgcagagtcatggtagctccgctgactctgccaa  14747500                                                                                              <------                                                                                              <------                          <-------TEIL                                                        -------                      <---------TOE2(3)                                                       -------              <---------ARR14(2)                                                              -------              --------->ARR14(2)               *TSS    --------->GLK1(2)                    <--------            --------->LBD16  <---------At4g35610      <---------GLK1(2)                     ---------           <---------ANAC46  --------->ZAT2 --------->LBD16                            ---------->DOF2           <---------ANAC58  <---------ZAT2--------->HSFB2a(2)                   --------->ANAC58           <---------ANAC58  --------->At4g35610---------->DOF2                  --------->ANAC58           <---------ANAC55(2)             <---------HSFB2a(2)                   --------->ANAC46    <---------CCA1(2) <---------TOE1(3)   <---------LBD16          ---------->DOF2    <---------ATHB12 --->P     <---------ANAC55(1)           <---------LBD16  <----------DOF2       --------->LBD16   ctcgtcgtctcttccgtatacattaaggttcagctcagtttttctcgggaaaaagagattcttttgtcgaaaagaatgtctccgagcaataaaggaaccg  14747600                              <---------AtMYB61                            <---------MYB46(3)                           <---------AtMYB61                   <---------WRKY18(1)                  ----------->HVH21--------->MYB52(1)      <---------YAB1       --------->ALFIN1                                 <---------WRKY18(1) ---HSFC1(2)      --------->WRKY45<---------WRKY45                          --------->MYB52(1) ---HSFB2a(1)     --------->WRKY12<---------WRKY38(1)                      ----------->HVH21 -->HSFC1(2)      --------->WRKY38(1)                              --------->DAG2 -->DEAR3(2)     --------->DOF5.7(2)                              ---------->DOF2   ------>ZmHOX2a(1) -->HSFB2a(1)  <---------ANAC58   <---------WRKY12        <---------ANAC46<----------DOF2 -ARR14(2)     <---------ANAC58  --------->WRKY18(1) --------->GLK1(2)  --------->At4g35610 >ARR14(2)     <---------ANAC46<---------MYB46(3)   <---------GLK1(2)   --------->ZAT2   tcttggctctgattctagcgttgaccatggtggtggtcaacgggttttcatcgagattcttcgtggagaaaagcagcttgacggtccttaactcatggga  14747700                   ------>NtERF2                   <------NtERF2                ------>NtERF2                <---------ATERF1(1)               <---------bZIP60(2)               <---------O2            ----------->HVH21                               --------->ATHB12            --------->ANAC46                               <---------YAB1            --------->ANAC58                         <-------GAMYB                              <----            --------->ANAC58                        <---------MYB46(3)        --------->ANAC46  <----        --------->ANAC58                            <---------DEAR3(2)       <---------REM1(2)  -----        --------->ANAC58                           <---------DEAR3(1)<-----------RAV1(1)       <-----    --------->At4g35610                         <---------DEAR3(1) <----------DOF2--------->ANAC58  -    <---------ZAT2--------->RAP2.6(2)          --------->SPL7  ------>ZmHOX2a(2)  --------->ANAC58  -    <---------At4g35610                   ---------->DOF2--------->YAB1    <---------WRKY38(1)-------   aatgggagctaagcacgacgcggccatagcaaactttggtctcccaaagtacggcggtttcatgatcggctctgtggtctacgcaggccaagacgcttac  14747800                                                               ------>ZmHOX2a(2)                                                          <---------WOX13(1) -----ANAC55(2)                                         --------->ATHB12 -----ANAC46                                           ===============HOX2a_HOX2a ---->ANAC55(2)                                        <---------YAB1 ----LBD16                                         <-----------GT1             --------->LBD16 -------->ANAC58                                <---------GLK1(2)    ----------->GT1 -------->ANAC58    --------->TOE2(3) ================================HOX2a_HOX2a    <-------TEIL -->MYB52(1)        --------->TOE1(3) ------>ZmHOX2a(1)------>ZmHOX2a(1)<---------KAN4(2)<---------ICU4   ggatgcaactctttcaacaaaaccttcaataccaagtctccttatcccaaaattctcctcattgatcgtggaggtataatccgagagttcatagtgacat  14747900                                                                                                  ---                                                    <---------WOX13(1)                            ---              <---------WOX13(1)           <---------YAB1                                       <----            --------->ATHB12             <-----------GT1                                  <----------DOF2           <---------YAB1       <---------DAG2    --------->ATHB12   <---------WOX13(1)------->TEIL--        --------->GLK1(2)       <----------DOF2  <---------YAB1   <---------YAB1      <---------CCA1(2)   tttcaacaagaatatgattgaaagtttgaaactactttttttgttaccattgtgattgaagtttagttctgatagatttgaagggtttgtatctttgtta  14748000  Previous    Next  AGI:  At2g34940.1    Description:  vacuolar sorting receptor, putative. Identical to Vacuolar-sorting receptor 5 precursor (VSR5) [Arabidopsis Thaliana] (GB:O64758); similar to vacuolar sorting receptor, putative [Arabidopsis thaliana] (TAIR:AT4G20110.1); similar to vacuolar sorting receptor, putative [Arabidopsis thaliana] (TAIR:AT2G14740.2); similar to vacuolar sorting receptor, putative [Arabidopsis thaliana] (TAIR:AT1G30900.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41919.1); similar to Vacuolar-sorting receptor 1 precursor (BP-80) (80 kDa proaleurein-binding protein) (GB:P93484); similar to unnamed protein product [Vitis vinifera] (GB:CAO63969.1); con Range:  from: 14747547    to: 14750496    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version